Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12e09
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    71   4e-14
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    70   7e-14
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    69   1e-13
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   3.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.3  
AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse t...    23   6.3  

>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 70.5 bits (165), Expect = 4e-14
 Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
 Frame = +1

Query: 136 ATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVV---SVEKDPT-----LGGTCLNV 291
           AT      ++ DLVVIG G GG   A +A QLG KV     V+  P      LGGTC+NV
Sbjct: 4   ATAAEQENYEYDLVVIGGGSGGLACAKQAVQLGAKVAVLDFVKPSPRGTKWGLGGTCVNV 63

Query: 292 GCIPSKALLHNSHLYHMAKHDFKQRGIETGE---VTFDFKKMMEYKANAVKGLTGGIAML 462
           GCIP K L+H + L   A HD +  G +  +   +  D+  + E   N +K +     + 
Sbjct: 64  GCIPKK-LMHQASLLGEAIHDSQPYGWQLPDPAAIRHDWATLTESVQNHIKSVNWVTRVD 122

Query: 463 FQKNKVNLVKGVGTIVAPNK-VEVHGEKGVETVNTKNILIASG 588
            +  KV  V G+G     +  V V   +    +  K+++IA G
Sbjct: 123 LRDQKVEYVNGLGYFKDDHTVVAVMKNQTERELRAKHVVIAVG 165


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 69.7 bits (163), Expect = 7e-14
 Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
 Frame = +1

Query: 136 ATRQYAT-THDADLVVIGSGPGGYVAAIKAAQLGMKVV---SVEKDPT-----LGGTCLN 288
           AT  +A   ++ DLVVIG G GG   A +A QLG KV     V+  P      LGGTC+N
Sbjct: 27  ATVMFAKENYEYDLVVIGGGSGGLACAKQAVQLGAKVAVLDFVKPSPRGTKWGLGGTCVN 86

Query: 289 VGCIPSKALLHNSHLYHMAKHDFKQRGIETGE---VTFDFKKMMEYKANAVKGLTGGIAM 459
           VGCIP K L+H + L   A HD +  G +  +   +  D+  + E   N +K +     +
Sbjct: 87  VGCIPKK-LMHQASLLGEAIHDSQPYGWQLPDPAAIRHDWATLTESVQNHIKSVNWVTRV 145

Query: 460 LFQKNKVNLVKGVGTIVAPNK-VEVHGEKGVETVNTKNILIASG 588
             +  KV  V G+G     +  V V   +    +  K+++IA G
Sbjct: 146 DLRDQKVEYVNGLGYFKDDHTVVAVMKNQTERELRAKHVVIAVG 189


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 69.3 bits (162), Expect = 1e-13
 Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
 Frame = +1

Query: 160 HDADLVVIGSGPGGYVAAIKAAQLGMKVV---SVEKDPT-----LGGTCLNVGCIPSKAL 315
           ++ DLVVIG G GG   A +A QLG KV     V+  P      LGGTC+NVGCIP K L
Sbjct: 9   YEYDLVVIGGGSGGLACAKQAVQLGAKVAVLDFVKPSPRGTKWGLGGTCVNVGCIPKK-L 67

Query: 316 LHNSHLYHMAKHDFKQRGIETGE---VTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNL 486
           +H + L   A HD +  G +  +   +  D+  + E   N +K +     +  +  KV  
Sbjct: 68  MHQASLLGEAIHDSQPYGWQLPDPAAIRHDWATLTESVQNHIKSVNWVTRVDLRDQKVEY 127

Query: 487 VKGVGTIVAPNK-VEVHGEKGVETVNTKNILIASG 588
           V G+G     +  V V   +    +  K+++IA G
Sbjct: 128 VNGLGYFKDDHTVVAVMKNQTERELRAKHVVIAVG 162


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 195 RARTDNNKICIMCGS 151
           R+ TD  ++CI CGS
Sbjct: 491 RSSTDRQQLCIRCGS 505


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 334  YHMAKHDFKQRGIETGEV 387
            YH++++D  Q  I TG+V
Sbjct: 2925 YHVSRNDVTQHAITTGKV 2942


>AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 129

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +2

Query: 272 EVLVSMLDVYHQKLYCTTHIFTIWPNMTSSKGVLKLV 382
           E+++    +YH + Y +TH    +P  + +  ++K V
Sbjct: 16  EIVIQNSLMYHCRSYISTHQHGFFPRRSVTTNLVKFV 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,892
Number of Sequences: 2352
Number of extensions: 13914
Number of successful extensions: 89
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)