Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12e06
(618 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 25 0.78
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 25 0.78
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.0
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 24 1.4
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 24 1.4
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 24 1.4
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 24 1.4
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 1.8
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 1.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.8
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 3.2
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 4.2
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 5.5
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 9.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.6
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 9.6
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 24.6 bits (51), Expect = 0.78
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = +1
Query: 241 VRFIWVRYGLVVVINPSLVTETSAVRLHPSDTIGLVSINRDVQPTDFISPVALSASEDLP 420
++ I V + + +N + E ++LH I D Q D I+ V ++ P
Sbjct: 1 MKTIVVIFAFCICVNAMTIEELK-IQLHDVQEICKTESGIDQQTVDDINEVNFDVEDEKP 59
Query: 421 ESGNVC 438
+ N C
Sbjct: 60 QRYNEC 65
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 24.6 bits (51), Expect = 0.78
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 395 LCLPARTYPNPEMSAALAKSTANLESN*AASTC--PWC-PPTVSLRPPA 532
L L AR PN + +LA ++L S S C P P T PP+
Sbjct: 267 LLLKARLNPNSSLQPSLASHHSHLSSALGRSACHSPGVYPSTAGFLPPS 315
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.2 bits (50), Expect = 1.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 107 WLPSETSPTRSIYASLFR 160
W ++ P RSIY+SL R
Sbjct: 370 WSSQKSEPRRSIYSSLLR 387
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 245 RTSWRQLAALRTQRE*MREPAQVLS 171
R +W++ + RT+RE REP + S
Sbjct: 60 RETWKERSRDRTERERSREPKIISS 84
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 245 RTSWRQLAALRTQRE*MREPAQVLS 171
R +W++ + RT+RE REP + S
Sbjct: 60 RETWKERSRDRTERERSREPKIISS 84
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 245 RTSWRQLAALRTQRE*MREPAQVLS 171
R +W++ + RT+RE REP + S
Sbjct: 60 RETWKERSRDRTERERSREPKIISS 84
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 245 RTSWRQLAALRTQRE*MREPAQVLS 171
R +W++ + RT+RE REP + S
Sbjct: 60 RETWKERSRDRTERERSREPKIISS 84
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.4 bits (48), Expect = 1.8
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 394 ALSASEDLPESGNVCGFGEVDGEPGEQLSCFDVSVVPADGLLEATSEEGQTSKYDV 561
+++ +E L E N C + ++ PGE S ++V + S +T ++DV
Sbjct: 7 SMTQTELLQELTNDCRYDKMTRPPGEINSINPINVYTKAYIYTIKSNMAKTLQFDV 62
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 494 DTSKQLSCSPGSPSTSPKPQTFP 426
D+ + L+ S SPS SP+P P
Sbjct: 870 DSQQPLNLSKKSPSPSPRPLVGP 892
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 207 ARVNEGTGAGVEQTTGRNSDA 145
AR EG GAG+ +T+ S++
Sbjct: 1236 AREREGVGAGIAETSAGTSNS 1256
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 317 VCTPRIPLVSSASTGMSNPLTS 382
VC+P + + +S + G PLT+
Sbjct: 35 VCSPDLSVFTSPACGSETPLTN 56
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.2 bits (45), Expect = 4.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -2
Query: 551 LEVWPSSLVASRRPSAGTTDTSKQLSCSPGSPSTSPKPQTFPDSGR 414
+EV P S + PS Q+SC SP P + +SGR
Sbjct: 365 IEVIPLSAIPE--PSKNPAMGHWQMSCVACSPPPRQTPPSRKESGR 408
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 10 GLSRKMKVLSFVLLCGLALVQGRSTGV 90
G ++L+ V+ G+A+V G TG+
Sbjct: 395 GQQAAYQLLALVITLGIAIVSGLITGL 421
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.0 bits (42), Expect = 9.6
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +1
Query: 448 EVDGEPGEQLSCFDVSVV---PADGLLEATSEEGQTSKYD 558
E D + G+ DV PA+G+L +T KYD
Sbjct: 391 EDDDDDGDDDDDDDVEAANGKPAEGMLTDVFHVQETDKYD 430
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 9.6
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -1
Query: 219 AEDPARVNEGTGAGVEQTTGRNSDA*MDLVGLVSEGNQGVGTLHTG 82
A DP N T VE ++ D + +EG V ++H G
Sbjct: 128 ATDPGEHNGDTVTDVEAGLASRTNPLDDSISQANEGFCAVISMHDG 173
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.0 bits (42), Expect = 9.6
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -1
Query: 219 AEDPARVNEGTGAGVEQTTGRNSDA*MDLVGLVSEGNQGVGTLHTG 82
A DP N T VE ++ D + +EG V ++H G
Sbjct: 123 ATDPGEHNGDTVTDVEAGLASRTNPLDDSISQANEGFCAVISMHDG 168
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,570
Number of Sequences: 438
Number of extensions: 4331
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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