Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12e01
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 97 8e-21
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 97 8e-21
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 95 6e-20
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 95 6e-20
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 79 3e-15
U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z93386-1|CAB07645.1| 442|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z73426-7|CAB60290.1| 338|Caenorhabditis elegans Hypothetical pr... 30 1.9
U70854-10|AAB09155.1| 296|Caenorhabditis elegans Hypothetical p... 30 1.9
AL110480-3|CAB60328.1| 338|Caenorhabditis elegans Hypothetical ... 30 1.9
Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical pr... 29 3.3
Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue... 29 3.3
U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeas... 29 3.3
U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeas... 29 3.3
U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeas... 29 3.3
U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeas... 29 3.3
U58748-5|AAP31419.1| 285|Caenorhabditis elegans Hypothetical pr... 28 5.8
U58748-4|AAB52967.1| 522|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC024812-8|AAF59557.4| 912|Caenorhabditis elegans Hypothetical ... 28 5.8
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 97.5 bits (232), Expect = 8e-21
Identities = 45/96 (46%), Positives = 62/96 (64%)
Frame = +1
Query: 421 IRWPDLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIYTSGFGITAGVHRLWSHRAY 600
I W ++ + +LH+ + G++ +V + K T +F+ A SGFGITAG HRLWSH++Y
Sbjct: 46 IVWRNVALFAALHVAAAIGLYELVFH-AKWQTAVFSFALYVFSGFGITAGAHRLWSHKSY 104
Query: 601 KARTPLRILLAFLFTITGQRDIYTWALDHRVHHKYS 708
KA TP+RI L L I Q DI WA DHR HHK++
Sbjct: 105 KATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWT 140
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 97.5 bits (232), Expect = 8e-21
Identities = 45/96 (46%), Positives = 62/96 (64%)
Frame = +1
Query: 421 IRWPDLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIYTSGFGITAGVHRLWSHRAY 600
I W ++ + +LH+ + G++ +V + K T +F+ A SGFGITAG HRLWSH++Y
Sbjct: 46 IVWRNVALFAALHVAAAIGLYELVFH-AKWQTAVFSFALYVFSGFGITAGAHRLWSHKSY 104
Query: 601 KARTPLRILLAFLFTITGQRDIYTWALDHRVHHKYS 708
KA TP+RI L L I Q DI WA DHR HHK++
Sbjct: 105 KATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWT 140
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 94.7 bits (225), Expect = 6e-20
Identities = 42/96 (43%), Positives = 58/96 (60%)
Frame = +1
Query: 421 IRWPDLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIYTSGFGITAGVHRLWSHRAY 600
I W ++ + +LH + G++ ++ E K T +F GFGITAG HRLWSH++Y
Sbjct: 47 IVWRNVALFAALHFAAAIGLYQLIF-EAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSY 105
Query: 601 KARTPLRILLAFLFTITGQRDIYTWALDHRVHHKYS 708
KA TP+RI L L I Q D+ WA DHR HHK++
Sbjct: 106 KATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWT 141
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 94.7 bits (225), Expect = 6e-20
Identities = 42/96 (43%), Positives = 58/96 (60%)
Frame = +1
Query: 421 IRWPDLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIYTSGFGITAGVHRLWSHRAY 600
I W ++ + +LH + G++ ++ E K T +F GFGITAG HRLWSH++Y
Sbjct: 47 IVWRNVALFAALHFAAAIGLYQLIF-EAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSY 105
Query: 601 KARTPLRILLAFLFTITGQRDIYTWALDHRVHHKYS 708
KA TP+RI L L I Q D+ WA DHR HHK++
Sbjct: 106 KATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWT 141
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/96 (37%), Positives = 55/96 (57%)
Frame = +1
Query: 421 IRWPDLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIYTSGFGITAGVHRLWSHRAY 600
I W ++ + V+LH+ ++ G++ +V + K T + G+T G HRLW+HRAY
Sbjct: 38 IVWKNVALFVALHIGALVGLYQLVF-QAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 601 KARTPLRILLAFLFTITGQRDIYTWALDHRVHHKYS 708
KA R+ L + +I Q DI WA DHR HHK++
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWT 132
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/96 (37%), Positives = 55/96 (57%)
Frame = +1
Query: 421 IRWPDLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIYTSGFGITAGVHRLWSHRAY 600
I W ++ + V+LH+ ++ G++ +V + K T + G+T G HRLW+HRAY
Sbjct: 38 IVWKNVALFVALHIGALVGLYQLVF-QAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96
Query: 601 KARTPLRILLAFLFTITGQRDIYTWALDHRVHHKYS 708
KA R+ L + +I Q DI WA DHR HHK++
Sbjct: 97 KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWT 132
>U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical
protein C10A4.5 protein.
Length = 368
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/96 (22%), Positives = 42/96 (43%)
Frame = +1
Query: 184 QILRCITMAPAQQNIEVCTEVMEPALELRLTSDGCKDENNVEHSKNNNTVKQNNILNEKT 363
+ + I AP Q++ E E +P + R +ENN ++ + + NE++
Sbjct: 227 EAIAMIEQAPVQESNEASIESRDP-IHSRNNRSSNTNENNDGNTNDQTDYENKETDNERS 285
Query: 364 NNETDFDISKYEAMEFTPRIRWPDLVVQVSLHLVSI 471
NET ++S + RI + V HL+++
Sbjct: 286 GNETTSNLSANQM-----RIIVSEAVQNAMAHLIAV 316
>Z93386-1|CAB07645.1| 442|Caenorhabditis elegans Hypothetical
protein R11H6.2 protein.
Length = 442
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -1
Query: 353 FNILFCLTVLLFLECSTLFSSLHP-SDVS-LNSNAGSITSVQTSMFCCAG 210
F+ +FCL L + TL S HP SD++ LNSN S+ S + C G
Sbjct: 378 FHFMFCLASLYVM--MTLTSWYHPDSDLAHLNSNMASVWVKMFSSWICGG 425
>Z73426-7|CAB60290.1| 338|Caenorhabditis elegans Hypothetical
protein Y24F12A.2 protein.
Length = 338
Score = 29.9 bits (64), Expect = 1.9
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Frame = +1
Query: 226 IEVCTEVMEPALELRLTSDGCKDENNVEHSKNNNTVKQNNILNEKTNNETDFDISKYEAM 405
I+ E+ EP L C+ ++ K V + + L E+ ET F+I Y +
Sbjct: 108 IDAQAELQEPIATL--VEYFCRAYKINQNIKFEVFVHKADGLTEEARVETKFNI--YHQV 163
Query: 406 EFTPRIRWPDLVVQVSLHLVSIY--GIF----LIVTNEVKLLTTLFALATIYTSGFGIT 564
+ T + + D+ +QV+ HL SIY IF +V N VK L TL L ++ + +T
Sbjct: 164 KETIKDQI-DVDLQVTYHLTSIYDHSIFEAFSKVVQNLVKQLPTLERLLDVFNNSSKVT 221
>U70854-10|AAB09155.1| 296|Caenorhabditis elegans Hypothetical
protein F38A5.11 protein.
Length = 296
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 334 KQNNILNEKTNNETDFDISKYEAMEFTPRIR----WPDLVVQVSLHLVSIYGIFLIVTNE 501
KQ NI + TNN TDF+ + E+ R + WP +++ + L +V + ++ NE
Sbjct: 197 KQYNIFKKVTNNSTDFERFQ-PPKEYIVRSKIYELWPYVLLSILLIIVFTHHFIMLEVNE 255
>AL110480-3|CAB60328.1| 338|Caenorhabditis elegans Hypothetical
protein Y24F12A.2 protein.
Length = 338
Score = 29.9 bits (64), Expect = 1.9
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Frame = +1
Query: 226 IEVCTEVMEPALELRLTSDGCKDENNVEHSKNNNTVKQNNILNEKTNNETDFDISKYEAM 405
I+ E+ EP L C+ ++ K V + + L E+ ET F+I Y +
Sbjct: 108 IDAQAELQEPIATL--VEYFCRAYKINQNIKFEVFVHKADGLTEEARVETKFNI--YHQV 163
Query: 406 EFTPRIRWPDLVVQVSLHLVSIY--GIF----LIVTNEVKLLTTLFALATIYTSGFGIT 564
+ T + + D+ +QV+ HL SIY IF +V N VK L TL L ++ + +T
Sbjct: 164 KETIKDQI-DVDLQVTYHLTSIYDHSIFEAFSKVVQNLVKQLPTLERLLDVFNNSSKVT 221
>Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical
protein F26D2.7 protein.
Length = 341
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 399 FIFADVKVCFVIGFLV*YIILFDCVVIFGVLHIIFVFTS 283
F A + +CF+ F++ YI LF I+G ++ V S
Sbjct: 10 FTSAGLVICFITNFILIYITLFHSKRIYGTYKLMVVMFS 48
>Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical
protein M88.6b protein.
Length = 594
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 171 SDSVRSCIRLNGHFLYEFKCSFHVIIFLLFSDHGIFITVRGYS 43
S+ +SCI + F EF H + +D+GIF TV+G++
Sbjct: 18 SEETKSCIDIEKGFKEEFNA--HKQPVCICADNGIFSTVKGFT 58
>Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical
protein M88.6a protein.
Length = 610
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 171 SDSVRSCIRLNGHFLYEFKCSFHVIIFLLFSDHGIFITVRGYS 43
S+ +SCI + F EF H + +D+GIF TV+G++
Sbjct: 18 SEETKSCIDIEKGFKEEFNA--HKQPVCICADNGIFSTVKGFT 58
>Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue
protein.
Length = 897
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 433 DLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIY 543
DL V + + GIF V N V+ L LFA T+Y
Sbjct: 16 DLQTNVQVKVAEFEGIFRDVLNPVRRLNQLFAEITVY 52
>U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform d
protein.
Length = 716
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 433 DLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIY 543
DL V + + GIF V N V+ L LFA T+Y
Sbjct: 16 DLQTNVQVKVAEFEGIFRDVLNPVRRLNQLFAEITVY 52
>U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform c
protein.
Length = 897
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 433 DLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIY 543
DL V + + GIF V N V+ L LFA T+Y
Sbjct: 16 DLQTNVQVKVAEFEGIFRDVLNPVRRLNQLFAEITVY 52
>U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform e
protein.
Length = 720
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 433 DLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIY 543
DL V + + GIF V N V+ L LFA T+Y
Sbjct: 20 DLQTNVQVKVAEFEGIFRDVLNPVRRLNQLFAEITVY 56
>U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform a
protein.
Length = 901
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 433 DLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIY 543
DL V + + GIF V N V+ L LFA T+Y
Sbjct: 20 DLQTNVQVKVAEFEGIFRDVLNPVRRLNQLFAEITVY 56
>U58748-5|AAP31419.1| 285|Caenorhabditis elegans Hypothetical
protein ZK180.3b protein.
Length = 285
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +1
Query: 322 NNTV-KQNNILNEKTNNETDFDISKYEAMEFTPRIRWPDLV--VQVSLHLVSIYGIFLIV 492
+NT+ K++++ N+ T+N D + + + I + + S ++S+YG L+
Sbjct: 144 SNTIRKESSVFNKNTDNHDDLVDTLSKVLHVVGVIGFVACTFGIPYSPVVISLYGGKLLS 203
Query: 493 TNEVKLLTTLFALATIYTSGFGITAG 570
N LL +L++ + T+ GIT G
Sbjct: 204 ENGGALLLSLYSGYILVTAINGITEG 229
>U58748-4|AAB52967.1| 522|Caenorhabditis elegans Hypothetical
protein ZK180.3a protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +1
Query: 322 NNTV-KQNNILNEKTNNETDFDISKYEAMEFTPRIRWPDLV--VQVSLHLVSIYGIFLIV 492
+NT+ K++++ N+ T+N D + + + I + + S ++S+YG L+
Sbjct: 292 SNTIRKESSVFNKNTDNHDDLVDTLSKVLHVVGVIGFVACTFGIPYSPVVISLYGGKLLS 351
Query: 493 TNEVKLLTTLFALATIYTSGFGITAG 570
N LL +L++ + T+ GIT G
Sbjct: 352 ENGGALLLSLYSGYILVTAINGITEG 377
>AC024812-8|AAF59557.4| 912|Caenorhabditis elegans Hypothetical
protein Y54E10BR.1 protein.
Length = 912
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -1
Query: 410 NSIASYLLMSKSV--SLLVFSFNILFCLTVLLFLECSTLFSSLHPSDVSLNSNAGSITSV 237
N I LL K V SLL S+ LF L L+ L F H SDV L T +
Sbjct: 683 NCIRLMLLCEKIVPYSLLSISYESLFMLIFLVLLTLFVRFEFGHLSDVELLQLKVDSTKI 742
Query: 236 QTSMF 222
T +
Sbjct: 743 STGEY 747
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,513,570
Number of Sequences: 27780
Number of extensions: 352026
Number of successful extensions: 1109
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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