Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12e01
(713 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 29 0.033
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 26 0.31
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 24 1.2
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 24 1.2
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 2.9
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 3.8
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 5.0
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 5.0
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 5.0
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 5.0
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 6.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.8
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 8.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.8
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 29.5 bits (63), Expect = 0.033
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 250 EPALELRLTSDGCKDENNVEHSKNNNTVKQNNILNEKTNN 369
EP + L++ + NN +++ NNN NN N NN
Sbjct: 311 EPKIISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNN 350
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 26.2 bits (55), Expect = 0.31
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 418 RIRWPDLVVQVSLHLVSIYGIFLIVTNEVKLLTTLFALATIYTSGFGITAGVH--RLWSH 591
RI+W L V ++ + G+F + N +K T + + T T G H R+W+H
Sbjct: 129 RIQWSKLQVFDCRYVTTTSGMFEALCNHIKYSTNKGNIRSAITIFPQRTDGKHDYRVWNH 188
Query: 592 R 594
+
Sbjct: 189 Q 189
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 24.2 bits (50), Expect = 1.2
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +1
Query: 217 QQNIEVCTEVMEPALELRLTSDGCKDENNVEHSKNNNTVKQNNILNEKTNN 369
Q E CTE A+ L + + N N NN N NN
Sbjct: 200 QPEDEECTEATAGAVVLETCQRNSNNSTITAGNANTNASNNNNNNNNNNNN 250
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 274 TSDGCKDENNVEHSKNNNTVKQNNILNEKTNNETDFDI 387
T+ + NN ++ NNN N N +NN + D+
Sbjct: 235 TNASNNNNNNNNNNNNNNGANDNGNGNGASNNNNNGDM 272
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 277 SDGCKDENNVEHSKNNNTVKQNNILNEKTNNETD 378
+D ++ NN + N K N N+K NN+ D
Sbjct: 420 NDNIQNTNNQNDNNQKNNKKNAN--NQKNNNQND 451
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 286 CKDENNVEHSKNNNTVKQNNILNEKTN 366
C + N ++ +N N NN N K N
Sbjct: 414 CVNNNQNDNIQNTNNQNDNNQKNNKKN 440
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 250 EPALELRLTSDGCKDENNVEHSKNNNTVKQNNILNEK 360
EP + L++ + NN +++ NN NN N+K
Sbjct: 78 EPKIISSLSNKTIHNNNNYKYNYNNKYNYNNNNYNKK 114
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 295 ENNVEHSKNNNTVKQNNILNEKTNNETDFDISKY 396
E + S +N T+ NN NN+ +++ + Y
Sbjct: 78 EPKIISSLSNKTIHNNNNYKYNYNNKYNYNNNNY 111
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 563 PRVYIDCGHIELIRRERLYEY 625
P YID + +IRR LY +
Sbjct: 215 PEPYIDITFVVIIRRRTLYYF 235
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 250 EPALELRLTSDGCKDENNVEHSKNNNTVKQN 342
EP + L++ + NN +++ NNN N
Sbjct: 78 EPKIISSLSNKTIHNNNNYKYNYNNNNYNNN 108
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 250 EPALELRLTSDGCKDENNVEHSKNNNTVKQN 342
EP + L++ + NN +++ NNN N
Sbjct: 78 EPKIISSLSNKTIHNNNNYKYNYNNNNYNNN 108
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 250 EPALELRLTSDGCKDENNVEHSKNNNTVKQN 342
EP + L++ + NN +++ NNN N
Sbjct: 78 EPKIISSLSNKTIHNNNNYKYNYNNNNYNNN 108
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 349 LNEKTNNETDFDISKYEAMEFTP 417
L+EK D D+ KYE + TP
Sbjct: 299 LDEKLERN-DLDLEKYEGISSTP 320
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 250 EPALELRLTSDGCKDENNVEHSKNNNTVKQN 342
EP + L++ + NN +++ NNN N
Sbjct: 78 EPKIISSLSNRTIHNNNNYKYNYNNNNYNNN 108
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 324 VIFGVLHIIFVFTSIR 277
VIFGVL ++F F R
Sbjct: 17 VIFGVLFVLFSFLRTR 32
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 324 VIFGVLHIIFVFTSIR 277
VIFGVL ++F F R
Sbjct: 17 VIFGVLFVLFSFLRTR 32
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 256 QVPLLLCKLQCSVAPEPW*CNVKFV 182
QV L ++ S+ PW C KF+
Sbjct: 909 QVTLNARLVELSLGSNPWSCRCKFL 933
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 341 FCLTVLLFLEC 309
FCL L+F EC
Sbjct: 453 FCLLFLMFFEC 463
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 341 FCLTVLLFLEC 309
FCL L+F EC
Sbjct: 506 FCLLFLMFFEC 516
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +1
Query: 217 QQNIEVCTEVMEPALELRLTSDGCKDEN 300
Q+N+++C+E+ E T C +N
Sbjct: 650 QENVQLCSEISESYSSNNKTLCKCDAQN 677
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/42 (21%), Positives = 21/42 (50%)
Frame = +1
Query: 283 GCKDENNVEHSKNNNTVKQNNILNEKTNNETDFDISKYEAME 408
GC +V N KQN+ + +++++ + + Y++ E
Sbjct: 927 GCSSLVDVSTPVNKKVYKQNDYIVDESSSSSFYSSFLYKSSE 968
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,838
Number of Sequences: 438
Number of extensions: 5033
Number of successful extensions: 45
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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