Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12d19
(415 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subuni... 73 4e-13
X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for ... 73 4e-13
CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein. 73 4e-13
CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein. 73 4e-13
BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase su... 73 4e-13
BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase su... 73 4e-13
BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase su... 73 4e-13
AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein. 73 4e-13
BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein. 66 4e-11
BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase su... 66 4e-11
BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase su... 66 4e-11
BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase su... 66 4e-11
BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase su... 66 4e-11
BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase su... 66 4e-11
AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase su... 66 4e-11
AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA seq... 42 8e-04
AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein. 34 0.21
X58139-1|CAA41147.1| 17|Homo sapiens cytochrome-c oxidase prot... 31 2.0
AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein. 30 2.6
AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein. 30 2.6
AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens ... 29 4.6
BC131746-1|AAI31747.1| 599|Homo sapiens DOCK3 protein protein. 29 8.1
AY254099-1|AAP80572.1| 2030|Homo sapiens DOCK3 protein. 29 8.1
AY145303-1|AAN12301.1| 2030|Homo sapiens modifier of cell adhesi... 29 8.1
AK127688-1|BAC87085.1| 129|Homo sapiens protein ( Homo sapiens ... 29 8.1
AB002297-1|BAA20759.1| 1907|Homo sapiens KIAA0299 protein. 29 8.1
>X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subunit
VIb protein.
Length = 86
Score = 72.9 bits (171), Expect = 4e-13
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +2
Query: 158 SYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 310
+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 33 NYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 44.0 bits (99), Expect = 2e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 99 KTAPFDPRFPNQNQTRHCYQ 158
KTAPFD RFPNQNQTR+C+Q
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQ 32
>X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for
cytochrome c oxidase subunit VIb (EC 1.9.3.1). ).
Length = 86
Score = 72.9 bits (171), Expect = 4e-13
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +2
Query: 158 SYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 310
+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 33 NYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 44.0 bits (99), Expect = 2e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 99 KTAPFDPRFPNQNQTRHCYQ 158
KTAPFD RFPNQNQTR+C+Q
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQ 32
>CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 72.9 bits (171), Expect = 4e-13
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +2
Query: 158 SYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 310
+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 33 NYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 44.0 bits (99), Expect = 2e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 99 KTAPFDPRFPNQNQTRHCYQ 158
KTAPFD RFPNQNQTR+C+Q
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQ 32
>CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 72.9 bits (171), Expect = 4e-13
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +2
Query: 158 SYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 310
+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 33 NYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 44.0 bits (99), Expect = 2e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 99 KTAPFDPRFPNQNQTRHCYQ 158
KTAPFD RFPNQNQTR+C+Q
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQ 32
>BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase
subunit VIb protein.
Length = 86
Score = 72.9 bits (171), Expect = 4e-13
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +2
Query: 158 SYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 310
+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 33 NYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 44.0 bits (99), Expect = 2e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 99 KTAPFDPRFPNQNQTRHCYQ 158
KTAPFD RFPNQNQTR+C+Q
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQ 32
>BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 72.9 bits (171), Expect = 4e-13
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +2
Query: 158 SYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 310
+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 33 NYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 44.0 bits (99), Expect = 2e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 99 KTAPFDPRFPNQNQTRHCYQ 158
KTAPFD RFPNQNQTR+C+Q
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQ 32
>BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 72.9 bits (171), Expect = 4e-13
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +2
Query: 158 SYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 310
+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 33 NYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 44.0 bits (99), Expect = 2e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 99 KTAPFDPRFPNQNQTRHCYQ 158
KTAPFD RFPNQNQTR+C+Q
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQ 32
>AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein.
Length = 86
Score = 72.9 bits (171), Expect = 4e-13
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +2
Query: 158 SYVDFHRCQKV---RGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI 310
+Y+DFHRCQK +G C +++RVY+SLCP WV WD QRAEGTF G+I
Sbjct: 33 NYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
Score = 44.0 bits (99), Expect = 2e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 99 KTAPFDPRFPNQNQTRHCYQ 158
KTAPFD RFPNQNQTR+C+Q
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQ 32
>BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein.
Length = 88
Score = 66.1 bits (154), Expect = 4e-11
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 110 FRPTVP*PKSDEALLPSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQ 280
F P P +++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q
Sbjct: 19 FDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQ 78
Query: 281 RAEGTFAGRI 310
G FAG+I
Sbjct: 79 IKNGIFAGKI 88
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 102 TAPFDPRFPNQNQTRHCYQ 158
T PFDPRFP+QNQ R+CYQ
Sbjct: 16 TPPFDPRFPSQNQIRNCYQ 34
>BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 66.1 bits (154), Expect = 4e-11
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 110 FRPTVP*PKSDEALLPSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQ 280
F P P +++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q
Sbjct: 19 FDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQ 78
Query: 281 RAEGTFAGRI 310
G FAG+I
Sbjct: 79 IKNGIFAGKI 88
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 102 TAPFDPRFPNQNQTRHCYQ 158
T PFDPRFP+QNQ R+CYQ
Sbjct: 16 TPPFDPRFPSQNQIRNCYQ 34
>BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 66.1 bits (154), Expect = 4e-11
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 110 FRPTVP*PKSDEALLPSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQ 280
F P P +++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q
Sbjct: 19 FDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQ 78
Query: 281 RAEGTFAGRI 310
G FAG+I
Sbjct: 79 IKNGIFAGKI 88
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 102 TAPFDPRFPNQNQTRHCYQ 158
T PFDPRFP+QNQ R+CYQ
Sbjct: 16 TPPFDPRFPSQNQIRNCYQ 34
>BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 66.1 bits (154), Expect = 4e-11
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 110 FRPTVP*PKSDEALLPSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQ 280
F P P +++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q
Sbjct: 19 FDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQ 78
Query: 281 RAEGTFAGRI 310
G FAG+I
Sbjct: 79 IKNGIFAGKI 88
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 102 TAPFDPRFPNQNQTRHCYQ 158
T PFDPRFP+QNQ R+CYQ
Sbjct: 16 TPPFDPRFPSQNQIRNCYQ 34
>BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 66.1 bits (154), Expect = 4e-11
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 110 FRPTVP*PKSDEALLPSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQ 280
F P P +++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q
Sbjct: 19 FDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQ 78
Query: 281 RAEGTFAGRI 310
G FAG+I
Sbjct: 79 IKNGIFAGKI 88
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 102 TAPFDPRFPNQNQTRHCYQ 158
T PFDPRFP+QNQ R+CYQ
Sbjct: 16 TPPFDPRFPSQNQIRNCYQ 34
>BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 66.1 bits (154), Expect = 4e-11
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 110 FRPTVP*PKSDEALLPSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQ 280
F P P +++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q
Sbjct: 19 FDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQ 78
Query: 281 RAEGTFAGRI 310
G FAG+I
Sbjct: 79 IKNGIFAGKI 88
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 102 TAPFDPRFPNQNQTRHCYQ 158
T PFDPRFP+QNQ R+CYQ
Sbjct: 16 TPPFDPRFPSQNQIRNCYQ 34
>AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb testes-specific isoform precursor protein.
Length = 88
Score = 66.1 bits (154), Expect = 4e-11
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 110 FRPTVP*PKSDEALLPSYVDFHRCQKVR---GEKYEPCYYFKRVYRSLCPNEWVDKWDNQ 280
F P P +++D+HRC K R G+ +PC Y+ RVY SLCP WV+ W+ Q
Sbjct: 19 FDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQ 78
Query: 281 RAEGTFAGRI 310
G FAG+I
Sbjct: 79 IKNGIFAGKI 88
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 102 TAPFDPRFPNQNQTRHCYQ 158
T PFDPRFP+QNQ R+CYQ
Sbjct: 16 TPPFDPRFPSQNQIRNCYQ 34
>AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA
sequence from clone RP4-591N18 on chromosome
22q13.1-13.2.33 Contains the C22orf34 gene for
chromosome 22 open reading frame 34. ).
Length = 108
Score = 41.9 bits (94), Expect = 8e-04
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 161 YVDFHRCQKVR----GEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGR 307
Y+D H +K G C +++ VY+SLCP W WD+ + F GR
Sbjct: 34 YLDLHHFKKAMTAKGGGDVSVCEWYQHVYKSLCPIPWASAWDDHGQKAHFLGR 86
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 99 KTAPFDPRFPNQNQTRHCYQ 158
+TAPFD RFPNQNQTR+ +Q
Sbjct: 13 RTAPFDRRFPNQNQTRNGWQ 32
>AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein.
Length = 901
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +3
Query: 162 TWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKAPS 299
T T++ + + +T H+T+S T +++P + + +G TS P +PS
Sbjct: 10 TETTSHSTPSFSSSTIHSTVSSSTTAITSPFTTAETGVTSTPSSPS 55
>X58139-1|CAA41147.1| 17|Homo sapiens cytochrome-c oxidase
protein.
Length = 17
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 260 VDKWDNQRAEGTFAGRI 310
V WD QRAEGTF G+I
Sbjct: 1 VTDWDEQRAEGTFPGKI 17
>AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 204 TNHATISRECTGLSAPMSGSTSGTTSAPKAPS 299
T ++T+S T +++P + + +G TS P +PS
Sbjct: 1 TIYSTVSSSTTAITSPFTTAETGVTSTPSSPS 32
>AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 204 TNHATISRECTGLSAPMSGSTSGTTSAPKAPS 299
T ++T+S T +++P + + +G TS P +PS
Sbjct: 1 TIYSTVSSSTTAITSPFTTAETGVTSTPSSPS 32
>AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ39453 fis, clone PROST2010046, highly similar to
Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
Length = 577
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = +3
Query: 81 KSPADLKTAPFDPRFPNQNQTRHCYQVTWTSTVARKFAAKNTNHATISRECTGLSAPMSG 260
+SP+ TA P + H +VT TST F +T T T S+
Sbjct: 42 QSPSSFSTAKTSTSLPYHTSSTHHPEVTPTSTTNITFKHTSTGTRTPVAHTTSASSSRLP 101
Query: 261 STSGTTSAPKAPSP 302
+ T S P SP
Sbjct: 102 TPFTTHSPPTGSSP 115
>BC131746-1|AAI31747.1| 599|Homo sapiens DOCK3 protein protein.
Length = 599
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 79 SNRPPTSKQHLSTHGSLTKIRRGTATKLRGLPPLPESSRRKIRTMLL 219
S P+S STH + +++ + RG P LP+ R MLL
Sbjct: 533 SQASPSSSSLSSTHSAPSQMITSAPSSARGSPSLPDKYRHAREMMLL 579
>AY254099-1|AAP80572.1| 2030|Homo sapiens DOCK3 protein.
Length = 2030
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 79 SNRPPTSKQHLSTHGSLTKIRRGTATKLRGLPPLPESSRRKIRTMLL 219
S P+S STH + +++ + RG P LP+ R MLL
Sbjct: 1736 SQASPSSSSLSSTHSAPSQMITSAPSSARGSPSLPDKYRHAREMMLL 1782
>AY145303-1|AAN12301.1| 2030|Homo sapiens modifier of cell adhesion
protein.
Length = 2030
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 79 SNRPPTSKQHLSTHGSLTKIRRGTATKLRGLPPLPESSRRKIRTMLL 219
S P+S STH + +++ + RG P LP+ R MLL
Sbjct: 1736 SQASPSSSSLSSTHSAPSQMITSAPSSARGSPSLPDKYRHAREMMLL 1782
>AK127688-1|BAC87085.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ45786 fis, clone NETRP2008488. ).
Length = 129
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 311 KSYRRRCLRRAGCPTCRPTHWGRET 237
K RR+ LR+A CP+ RP G +T
Sbjct: 67 KGNRRKELRQANCPSLRPQRKGADT 91
>AB002297-1|BAA20759.1| 1907|Homo sapiens KIAA0299 protein.
Length = 1907
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 79 SNRPPTSKQHLSTHGSLTKIRRGTATKLRGLPPLPESSRRKIRTMLL 219
S P+S STH + +++ + RG P LP+ R MLL
Sbjct: 1613 SQASPSSSSLSSTHSAPSQMITSAPSSARGSPSLPDKYRHAREMMLL 1659
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,922,639
Number of Sequences: 237096
Number of extensions: 1416327
Number of successful extensions: 4246
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4230
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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