BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12d18
(595 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 24 3.2
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 23 5.6
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 24.2 bits (50), Expect = 3.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 137 ASLTRNYGTAKRVVAAKPVVEMDGDEMTRIIW 232
ASL Y KR +AA+ ++ ++ R++W
Sbjct: 1021 ASLVDGYRYRKRYIAAQGPLQETAEDFWRMLW 1052
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 23.4 bits (48), Expect = 5.6
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = -3
Query: 581 CIGRRAHDGLSQ*VSSNQAQPS---GYSDTISVHGILYRPK-CYGSFRSDL 441
C A DG++ S+NQ+QP+ G + TI+ G ++ C S+R+ L
Sbjct: 312 CTKAPAQDGVAVASSNNQSQPARTGGSAVTITSEGQRFQCNLCDMSYRTKL 362
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,979
Number of Sequences: 2352
Number of extensions: 11490
Number of successful extensions: 53
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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