Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12d18
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical pr... 239 1e-63
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 227 3e-60
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 35 0.050
Z81576-1|CAB04643.2| 312|Caenorhabditis elegans Hypothetical pr... 33 0.15
AF077542-12|AAC26293.1| 169|Caenorhabditis elegans Hypothetical... 31 0.62
Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical pr... 27 7.6
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical
protein C34F6.8 protein.
Length = 435
Score = 239 bits (584), Expect = 1e-63
Identities = 108/155 (69%), Positives = 129/155 (83%), Gaps = 5/155 (3%)
Frame = +2
Query: 143 LTRNYGTA-----KRVVAAKPVVEMDGDEMTRIIWAKIKERLIFPYVKVDCLYFDLGLPH 307
L RN TA +++ PVV++DGDEMTRIIW +IK +LI PY+ +D Y+DLGL +
Sbjct: 12 LARNVATAATQERQKIKVDNPVVDLDGDEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEY 71
Query: 308 RDATDDQVTIDSAHAILKHNVGIKCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVF 487
RD T+DQVTID+AHAIL+H+VGIKCATITPDE R++EF LKKMWLSPNGTIRNILGGTVF
Sbjct: 72 RDETNDQVTIDAAHAILEHSVGIKCATITPDEARIKEFNLKKMWLSPNGTIRNILGGTVF 131
Query: 488 REPILCQSIPRVVPGWTKPIVIGRHAHGDQYKAQD 592
REPILC++IPR+VPGWT+PI IGRHA GDQYK D
Sbjct: 132 REPILCKNIPRLVPGWTQPITIGRHAFGDQYKCTD 166
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 227 bits (556), Expect = 3e-60
Identities = 102/144 (70%), Positives = 121/144 (84%)
Frame = +2
Query: 164 AKRVVAAKPVVEMDGDEMTRIIWAKIKERLIFPYVKVDCLYFDLGLPHRDATDDQVTIDS 343
A + + +VEM GDEMTRIIW IKE+LI PYV ++ +FDLG+ HRDATDDQVTID+
Sbjct: 2 AAQKIQGGDIVEMQGDEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDA 61
Query: 344 AHAILKHNVGIKCATITPDEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCQSIPRV 523
A+A LK+NV +KCATITPDE RVEEFKLKKMW SPNGTIRNILGGTVFREPI+ +++PR+
Sbjct: 62 ANATLKYNVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRL 121
Query: 524 VPGWTKPIVIGRHAHGDQYKAQDF 595
V W+KPI+IGRHAH DQYKA DF
Sbjct: 122 VNTWSKPIIIGRHAHADQYKATDF 145
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
protein F40H6.5 protein.
Length = 1288
Score = 34.7 bits (76), Expect = 0.050
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 53 HEQW*IHEQYRNMANTSTTKILKCVNQFASLTRNYGTA-KRVVAAKPVVEM-DGDEMTRI 226
++QW I N NT+ + KC++ F +NYG KR+V ++E+ D +T
Sbjct: 730 YQQWTIDTVQMNYQNTNLKYLPKCISIF---QKNYGDLNKRMVNFARIMEVGDNITITGH 786
Query: 227 IWAKIKERLIFPYVKVDCLY 286
IW E YV +D Y
Sbjct: 787 IWQNASESTFNLYVGMDPKY 806
>Z81576-1|CAB04643.2| 312|Caenorhabditis elegans Hypothetical
protein R10E8.1 protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.15
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 197 EMDGDEMTRII-WAKIKERLIFPYVKVDCLYFDLGLPHRDATDDQVTIDSAHAILKHNVG 373
EMD D +T++ W +IK LI ++ L L LP T +TI + + KH +G
Sbjct: 170 EMDCDGLTKLPHWKRIKSLLIEGFIVSAPLEHFLHLPEVTITMQSITIFNLKLLKKHFLG 229
Query: 374 IK 379
+K
Sbjct: 230 LK 231
>AF077542-12|AAC26293.1| 169|Caenorhabditis elegans Hypothetical
protein Y57G7A.9 protein.
Length = 169
Score = 31.1 bits (67), Expect = 0.62
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 320 DDQVTIDSAHAILKHNVGIKCATITPDEQRVE 415
+DQ + H I K N GI+CA + P+ Q E
Sbjct: 29 NDQYFQEVIHRICKRNEGIRCAMLAPNAQHAE 60
>Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 302 PHR---DATDDQVTIDSAHAILKHNVGIKCATITPDEQR 409
PHR DD++ +D + ++LK ++C ++ E+R
Sbjct: 97 PHRLLVKEWDDRILVDKSQSVLKAETKLECLSLCAQEKR 135
>Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 302 PHR---DATDDQVTIDSAHAILKHNVGIKCATITPDEQR 409
PHR DD++ +D + ++LK ++C ++ E+R
Sbjct: 97 PHRLLVKEWDDRILVDKSQSVLKAETKLECLSLCAQEKR 135
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 359 KHNVGIKCATITPDEQRVEEFKLKKMWLSPNGTIRNI 469
KH + T+ PDE+ VE KL K PN T+R +
Sbjct: 2208 KHPHSYRTKTV-PDEEPVEIVKLVKNRRLPNATLREV 2243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,716,883
Number of Sequences: 27780
Number of extensions: 275601
Number of successful extensions: 603
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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