Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12d14
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical pr... 170 9e-43
AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical ... 117 6e-27
Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical pr... 113 8e-26
Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical pr... 100 1e-21
U41270-5|AAA82442.2| 364|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr... 29 2.9
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 29 2.9
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 29 2.9
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 3.9
U56961-5|AAK39298.2| 156|Caenorhabditis elegans Hypothetical pr... 27 9.0
L14714-1|AAA28180.2| 244|Caenorhabditis elegans Temporarily ass... 27 9.0
DQ298419-1|ABC33802.1| 230|Caenorhabditis elegans metaxin 2 pro... 27 9.0
>Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical
protein C37E2.1 protein.
Length = 379
Score = 170 bits (413), Expect = 9e-43
Identities = 82/153 (53%), Positives = 110/153 (71%), Gaps = 3/153 (1%)
Frame = +1
Query: 214 ALQPRATKEGRIKCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLE 393
A +P ++K T+IPGDGVGPEL+Y VQ++ K IP++FE F SEV+ T S+ +E
Sbjct: 32 APRPPTELNQKLKVTIIPGDGVGPELIYTVQDIVKQTGIPIEFEEIFLSEVHYTRSSSIE 91
Query: 394 DVVNSIA-VNKICIKGILATPDFSHT-GELQTLNMKLRNALDLYANVVHVKSLPNVKCRH 567
+ V SI N + +KG + HT GELQ LNM+LR +LDL+ANVVH+K+L +K RH
Sbjct: 92 NAVESIGRNNNVALKGAIEESAVLHTEGELQGLNMRLRRSLDLFANVVHIKTLDGIKTRH 151
Query: 568 -QDVDCIIIREQTEGEYSALEHESVPGVVECLK 663
+ +D +I+REQTEGEYS+LEHE VPGV+ECLK
Sbjct: 152 GKQLDFVIVREQTEGEYSSLEHELVPGVIECLK 184
>AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical
protein C30F12.7 protein.
Length = 373
Score = 117 bits (282), Expect = 6e-27
Identities = 58/147 (39%), Positives = 87/147 (59%)
Frame = +1
Query: 223 PRATKEGRIKCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVV 402
P A GR +PGDG+GPE++ ++ +F PV+FE S + L ++ +
Sbjct: 28 PLAKYGGRHTVCALPGDGIGPEMIAHIRNIFSFCHAPVNFEEVQVS--SSLLDGDMDAAM 85
Query: 403 NSIAVNKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKCRHQDVDC 582
+I N + IKG + T + + N++LR LDLYAN++H ++P V RH +D
Sbjct: 86 LAIERNGVAIKGNIETKH--DDPQFNSRNVELRTKLDLYANILHCVTIPTVPTRHSGIDI 143
Query: 583 IIIREQTEGEYSALEHESVPGVVECLK 663
++IRE TEGEYS LEHE+VPG+VE +K
Sbjct: 144 VLIRENTEGEYSGLEHEAVPGIVESIK 170
>Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical
protein F35G12.2 protein.
Length = 396
Score = 113 bits (273), Expect = 8e-26
Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 10/197 (5%)
Frame = +1
Query: 103 LSRNIFRAVMQGSQHVGKGVHTSSVTTEKNVCYAPFGA--LQPRATK----EGRIKCTLI 264
+S N+ ++ S++V V + V T N F + LQ TK GR T++
Sbjct: 1 MSSNVLGHTLRSSKNV---VQKAFVATSPNSDMLRFRSPVLQTNTTKLARYGGRHNVTVL 57
Query: 265 PGDGVGPELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGIL 444
PGDG+GPE+++ V+ + A PVDFE + S L + + +I N + +KG +
Sbjct: 58 PGDGIGPEMLHHVERILSAVQAPVDFEVVNLTSKEDA-SEDLAEAITAIKRNGVALKGNI 116
Query: 445 ATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKCRHQDVDCIIIREQTEGEYSAL 624
T F + + N++LR L+LYANV+H ++P V RH +D +IIRE TEGEYS
Sbjct: 117 ETK-FDNPSFVSR-NLELRRQLNLYANVLHCSTIPTVPSRHTGIDMVIIRENTEGEYSGN 174
Query: 625 EHESV----PGVVECLK 663
EHE+V P VVE LK
Sbjct: 175 EHEAVNAPHPRVVESLK 191
>Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical
protein F43G9.1 protein.
Length = 358
Score = 100 bits (239), Expect = 1e-21
Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Frame = +1
Query: 250 KCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFFFSEV---NPTLSAPLEDVVNSIAVN 420
+ TLIPGDG+GPE+ +VQ++F+AA P+ ++ + V + P + + N
Sbjct: 26 RVTLIPGDGIGPEISASVQKIFEAADAPIAWDPVDVTPVKGRDGVFRIPSR-CIELMHAN 84
Query: 421 KICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKCRHQDVDCIIIREQ 600
K+ +KG L TP G ++LN+ +R LYANV +SL K + +VD + IRE
Sbjct: 85 KVGLKGPLETP--IGKGH-RSLNLAVRKEFSLYANVRPCRSLEGHKTLYDNVDVVTIREN 141
Query: 601 TEGEYSALEHESVPGVVECLK 663
TEGEYS +EHE VPGVV+ +K
Sbjct: 142 TEGEYSGIEHEIVPGVVQSIK 162
>U41270-5|AAA82442.2| 364|Caenorhabditis elegans Hypothetical
protein AH9.4 protein.
Length = 364
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 421 KICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKCRH 567
+ I G T FSHTGE TL+ K AL + ++ + P+VK H
Sbjct: 217 RYAISGPATTKRFSHTGETDTLDNKAHVALAI--SITASTNTPSVKRIH 263
>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical
protein F11A10.4 protein.
Length = 1646
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/49 (24%), Positives = 31/49 (63%)
Frame = +1
Query: 514 LYANVVHVKSLPNVKCRHQDVDCIIIREQTEGEYSALEHESVPGVVECL 660
+ ++++ + S+P+++ R + +DC++ QT+G + L S P V++ +
Sbjct: 836 IISSLLALCSIPHIQVRRRQLDCVMSLMQTDGAF--LLSTSWPNVIQII 882
>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical
protein F11A10.4 protein.
Length = 1646
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/49 (24%), Positives = 31/49 (63%)
Frame = +1
Query: 514 LYANVVHVKSLPNVKCRHQDVDCIIIREQTEGEYSALEHESVPGVVECL 660
+ ++++ + S+P+++ R + +DC++ QT+G + L S P V++ +
Sbjct: 836 IISSLLALCSIPHIQVRRRQLDCVMSLMQTDGAF--LLSTSWPNVIQII 882
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 469 GELQTLNMKLRNALDLYANVVHVKSLPNVKCRH 567
G LQT++ +N LDLY+ + K K RH
Sbjct: 169 GSLQTIHFLTKNLLDLYSQLFSRKITAEFKTRH 201
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 469 GELQTLNMKLRNALDLYANVVHVKSLPNVKCRH 567
G LQT++ +N LDLY+ + K K RH
Sbjct: 169 GSLQTIHFLTKNLLDLYSQLFSRKITAEFKTRH 201
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +1
Query: 343 ESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILATPDFSHTGELQTLNMKLRNALDLYA 522
ES S N L PL D+ N + + +GI+ F H G+++ +++ ++
Sbjct: 795 ESVILSMANDNLE-PLGDLKNLNQKSTVKCEGIICATTFVHRGQIRFSGLEVNILTPIF- 852
Query: 523 NVVHVKSLPNVKCRHQDVDCIII 591
VH L NV+ + V + I
Sbjct: 853 --VHEGRLTNVENKQNHVKHLFI 873
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +1
Query: 343 ESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILATPDFSHTGELQTLNMKLRNALDLYA 522
ES S N L PL D+ N + + +GI+ F H G+++ +++ ++
Sbjct: 795 ESVILSMANDNLE-PLGDLKNLNQKSTVKCEGIICATTFVHRGQIRFSGLEVNILTPIF- 852
Query: 523 NVVHVKSLPNVKCRHQDVDCIII 591
VH L NV+ + V + I
Sbjct: 853 --VHEGRLTNVENKQNHVKHLFI 873
>U56961-5|AAK39298.2| 156|Caenorhabditis elegans Hypothetical
protein T19D7.6 protein.
Length = 156
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 418 NKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVK 558
N + + P F++ EL N K+RN L AN+ K+ PN++
Sbjct: 55 NNVLTENSFNMPKFANLKELSVRNNKIRNLGVLLANI--QKNCPNIE 99
>L14714-1|AAA28180.2| 244|Caenorhabditis elegans Temporarily
assigned gene nameprotein 354, isoform a protein.
Length = 244
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 298 AVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILATPDFSH-TGE 474
AVQ + S+P + N +P + VV + +NK I G A DF H G
Sbjct: 31 AVQTFLRMTSLPFNVRQ----RPNVDFISP-DGVVPLLKINKTLITGFNAIVDFVHKKGV 85
Query: 475 LQTLNMKLRNALDLYANVVHVKSL 546
T ++ D+ AN+ ++ L
Sbjct: 86 TLTSHLSETQVADMRANISMIEHL 109
>DQ298419-1|ABC33802.1| 230|Caenorhabditis elegans metaxin 2
protein.
Length = 230
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 298 AVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILATPDFSH-TGE 474
AVQ + S+P + N +P + VV + +NK I G A DF H G
Sbjct: 47 AVQTFLRMTSLPFNVRQ----RPNVDFISP-DGVVPLLKINKTLITGFNAIVDFVHKKGV 101
Query: 475 LQTLNMKLRNALDLYANVVHVKSL 546
T ++ D+ AN+ ++ L
Sbjct: 102 TLTSHLSETQVADMRANISMIEHL 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,983,021
Number of Sequences: 27780
Number of extensions: 357286
Number of successful extensions: 1015
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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