Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12d10
(591 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064383-1|AAH64383.1| 307|Homo sapiens solute carrier family 3... 113 3e-25
BC047682-1|AAH47682.1| 307|Homo sapiens SLC39A9 protein protein. 113 3e-25
AY358687-1|AAQ89050.1| 307|Homo sapiens DDFI714 protein. 113 3e-25
AK002136-1|BAA92100.1| 307|Homo sapiens protein ( Homo sapiens ... 113 3e-25
AK222547-1|BAD96267.1| 231|Homo sapiens solute carrier family 3... 112 8e-25
AY780789-1|AAV98359.1| 284|Homo sapiens solute carrier family 3... 104 2e-22
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 29 9.3
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 29 9.3
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 29 9.3
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 29 9.3
>BC064383-1|AAH64383.1| 307|Homo sapiens solute carrier family 39
(zinc transporter), member 9 protein.
Length = 307
Score = 113 bits (273), Expect = 3e-25
Identities = 76/156 (48%), Positives = 97/156 (62%), Gaps = 25/156 (16%)
Frame = +3
Query: 198 MDGTWFLILLALVMLVGSYVAGSIPLNVSMSEDKLKKVTIFGAGLLVGTALAVIIPEGVR 377
MD + LL+L MLVG YVAG IPL V+ SE++LK VT+ GAGLL GTALAVI+PEGV
Sbjct: 1 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH 60
Query: 378 ALFEH----PHTPA------VTKDYTAEPT----HEDS-----LYSVIGITLVLGFVFML 500
AL+E H A + D AE + HE S L++ IG++LVLGFVFML
Sbjct: 61 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML 120
Query: 501 LVDQMSSRYNDSSNPIE------RNVTATVGLVVHA 590
LVDQ+ + + S++ E +T T+GLVVHA
Sbjct: 121 LVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHA 156
>BC047682-1|AAH47682.1| 307|Homo sapiens SLC39A9 protein protein.
Length = 307
Score = 113 bits (273), Expect = 3e-25
Identities = 76/156 (48%), Positives = 97/156 (62%), Gaps = 25/156 (16%)
Frame = +3
Query: 198 MDGTWFLILLALVMLVGSYVAGSIPLNVSMSEDKLKKVTIFGAGLLVGTALAVIIPEGVR 377
MD + LL+L MLVG YVAG IPL V+ SE++LK VT+ GAGLL GTALAVI+PEGV
Sbjct: 1 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH 60
Query: 378 ALFEH----PHTPA------VTKDYTAEPT----HEDS-----LYSVIGITLVLGFVFML 500
AL+E H A + D AE + HE S L++ IG++LVLGFVFML
Sbjct: 61 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML 120
Query: 501 LVDQMSSRYNDSSNPIE------RNVTATVGLVVHA 590
LVDQ+ + + S++ E +T T+GLVVHA
Sbjct: 121 LVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHA 156
>AY358687-1|AAQ89050.1| 307|Homo sapiens DDFI714 protein.
Length = 307
Score = 113 bits (273), Expect = 3e-25
Identities = 76/156 (48%), Positives = 97/156 (62%), Gaps = 25/156 (16%)
Frame = +3
Query: 198 MDGTWFLILLALVMLVGSYVAGSIPLNVSMSEDKLKKVTIFGAGLLVGTALAVIIPEGVR 377
MD + LL+L MLVG YVAG IPL V+ SE++LK VT+ GAGLL GTALAVI+PEGV
Sbjct: 1 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH 60
Query: 378 ALFEH----PHTPA------VTKDYTAEPT----HEDS-----LYSVIGITLVLGFVFML 500
AL+E H A + D AE + HE S L++ IG++LVLGFVFML
Sbjct: 61 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML 120
Query: 501 LVDQMSSRYNDSSNPIE------RNVTATVGLVVHA 590
LVDQ+ + + S++ E +T T+GLVVHA
Sbjct: 121 LVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHA 156
>AK002136-1|BAA92100.1| 307|Homo sapiens protein ( Homo sapiens
cDNA FLJ11274 fis, clone PLACE1009368, weakly similar to
METAL HOMEOSTASIS FACTOR ATX2. ).
Length = 307
Score = 113 bits (273), Expect = 3e-25
Identities = 76/156 (48%), Positives = 97/156 (62%), Gaps = 25/156 (16%)
Frame = +3
Query: 198 MDGTWFLILLALVMLVGSYVAGSIPLNVSMSEDKLKKVTIFGAGLLVGTALAVIIPEGVR 377
MD + LL+L MLVG YVAG IPL V+ SE++LK VT+ GAGLL GTALAVI+PEGV
Sbjct: 1 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH 60
Query: 378 ALFEH----PHTPA------VTKDYTAEPT----HEDS-----LYSVIGITLVLGFVFML 500
AL+E H A + D AE + HE S L++ IG++LVLGFVFML
Sbjct: 61 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML 120
Query: 501 LVDQMSSRYNDSSNPIE------RNVTATVGLVVHA 590
LVDQ+ + + S++ E +T T+GLVVHA
Sbjct: 121 LVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHA 156
>AK222547-1|BAD96267.1| 231|Homo sapiens solute carrier family 39
(zinc transporter), member 9 variant protein.
Length = 231
Score = 112 bits (270), Expect = 8e-25
Identities = 75/156 (48%), Positives = 97/156 (62%), Gaps = 25/156 (16%)
Frame = +3
Query: 198 MDGTWFLILLALVMLVGSYVAGSIPLNVSMSEDKLKKVTIFGAGLLVGTALAVIIPEGVR 377
MD + LL+L MLVG YVAG IPL V+ SE++LK VT+ GAGLL GTALAVI+PEGV
Sbjct: 1 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH 60
Query: 378 ALFEH----PHTPA------VTKDYTAEPT----HEDS-----LYSVIGITLVLGFVFML 500
AL+E H A + D AE + HE S L++ IG++LVLGFVFML
Sbjct: 61 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML 120
Query: 501 LVDQMSSRYNDSSNPIE------RNVTATVGLVVHA 590
L+DQ+ + + S++ E +T T+GLVVHA
Sbjct: 121 LMDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHA 156
>AY780789-1|AAV98359.1| 284|Homo sapiens solute carrier family 39
member 9 protein.
Length = 284
Score = 104 bits (250), Expect = 2e-22
Identities = 67/134 (50%), Positives = 86/134 (64%), Gaps = 19/134 (14%)
Frame = +3
Query: 198 MDGTWFLILLALVMLVGSYVAGSIPLNVSMSEDKLKKVTIFGAGLLVGTALAVIIPEGVR 377
MD + LL+L MLVG YVAG IPL V+ SE++LK VT+ GAGLL GTALAVI+PEGV
Sbjct: 1 MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAGLLCGTALAVIVPEGVH 60
Query: 378 ALFEH----PHTPA------VTKDYTAEPT----HEDS-----LYSVIGITLVLGFVFML 500
AL+E H A + D AE + HE S L++ IG++LVLGFVFML
Sbjct: 61 ALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHTQLHAYIGVSLVLGFVFML 120
Query: 501 LVDQMSSRYNDSSN 542
LVDQ+ + + S++
Sbjct: 121 LVDQIGNSHVHSTD 134
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 29.5 bits (63), Expect = 9.3
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -3
Query: 376 RTPSGMITAKAVPTSNPAPNIVTFFSLSSDMLTFNGILPAT*DPTNITSASRI 218
+TP + +A TS PAP VTF S S T + + P+T + I S S++
Sbjct: 473 QTPPVLTSATGTQTS-PAPTTVTFGSTDSSTSTLHTLTPST-ALSTIVSTSQV 523
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 29.5 bits (63), Expect = 9.3
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -3
Query: 376 RTPSGMITAKAVPTSNPAPNIVTFFSLSSDMLTFNGILPAT*DPTNITSASRI 218
+TP + +A TS PAP VTF S S T + + P+T + I S S++
Sbjct: 473 QTPPVLTSATGTQTS-PAPTTVTFGSTDSSTSTLHTLTPST-ALSTIVSTSQV 523
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 29.5 bits (63), Expect = 9.3
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -3
Query: 376 RTPSGMITAKAVPTSNPAPNIVTFFSLSSDMLTFNGILPAT*DPTNITSASRI 218
+TP + +A TS PAP VTF S S T + + P+T + I S S++
Sbjct: 133 QTPPVLTSATGTQTS-PAPTTVTFGSTDSSTSTLHTLTPST-ALSTIVSTSQV 183
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 29.5 bits (63), Expect = 9.3
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -3
Query: 376 RTPSGMITAKAVPTSNPAPNIVTFFSLSSDMLTFNGILPAT*DPTNITSASRI 218
+TP + +A TS PAP VTF S S T + + P+T + I S S++
Sbjct: 133 QTPPVLTSATGTQTS-PAPTTVTFGSTDSSTSTLHTLTPST-ALSTIVSTSQV 183
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,626,327
Number of Sequences: 237096
Number of extensions: 1578246
Number of successful extensions: 2782
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2771
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -