Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12d10
         (591 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81110-4|CAB03256.1|  381|Caenorhabditis elegans Hypothetical pr...    85   5e-17
Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical pr...    33   0.15 
Z81101-6|CAE53732.1|  840|Caenorhabditis elegans Hypothetical pr...    31   0.61 
Z81101-5|CAB03199.3|  705|Caenorhabditis elegans Hypothetical pr...    31   0.61 
AB125702-1|BAD01496.1|  705|Caenorhabditis elegans D2-like dopam...    31   0.61 
AB125701-1|BAD01495.1|  840|Caenorhabditis elegans D2-like dopam...    31   0.61 
Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AL110485-26|CAB60359.3|  779|Caenorhabditis elegans Hypothetical...    28   5.7  

>Z81110-4|CAB03256.1|  381|Caenorhabditis elegans Hypothetical
           protein T01D3.5 protein.
          Length = 381

 Score = 84.6 bits (200), Expect = 5e-17
 Identities = 39/63 (61%), Positives = 52/63 (82%)
 Frame = +3

Query: 198 MDGTWFLILLALVMLVGSYVAGSIPLNVSMSEDKLKKVTIFGAGLLVGTALAVIIPEGVR 377
           M+G  FL++L+  M  GSY+AGSIPL  S+SE +++ V+IFGAGLLVGTAL+VIIPEG+ 
Sbjct: 1   MEGVSFLLVLSSAMFFGSYMAGSIPLMFSLSESRIRLVSIFGAGLLVGTALSVIIPEGIE 60

Query: 378 ALF 386
           AL+
Sbjct: 61  ALY 63



 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
 Frame = +3

Query: 390 HPHTPAVTKDYTAEPTHEDSLYSVIGITLVLGFVFMLLVDQMSS---RYNDSSNPIERNV 560
           H +     K++  +     ++++ IG +LVLGFV MLLVDQ+ S     ND +      +
Sbjct: 149 HSNNEHDEKEHEEKQHSHGNIHAQIGYSLVLGFVLMLLVDQIGSVTVARNDRAGRSRIGI 208

Query: 561 TATVGLVVHA 590
           +AT+GLVVHA
Sbjct: 209 SATIGLVVHA 218


>Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical
           protein T28F3.3 protein.
          Length = 393

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +3

Query: 300 LKKVTIFGAGLLVGTALAVIIPEGVRAL-FEHPHTPAVTKDYTAEPTHEDSLYSVIGITL 476
           LK +  FGAG L+G AL  IIP  +      H H          + +H+ S    +G  +
Sbjct: 115 LKILLAFGAGGLLGDALLHIIPHSLSPHDHSHDHHDHNHSHKEHDHSHDHSNQLRVGTFV 174

Query: 477 VLGFVFMLLVDQM 515
           + G +  ++V+Q+
Sbjct: 175 IAGILVFMMVEQL 187


>Z81101-6|CAE53732.1|  840|Caenorhabditis elegans Hypothetical
           protein K09G1.4b protein.
          Length = 840

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
 Frame = +3

Query: 219 ILLALVMLVGSYVAGSIPLNVSMSEDKLKKV-TIFGAGLLVGTALAVIIPEGVRALFEHP 395
           ILL  V+    Y A S+P+  S     +K+V T+     LV   LA  +  GV  +    
Sbjct: 126 ILLLAVISFDRYRAVSLPIQYSRQSQNVKRVWTLIAVIWLVSLTLASPMVFGVN-VRPPD 184

Query: 396 HTPAVTKDYTAEPTHEDSLYS-VIGITLVLGFVFMLLVDQMSSRYNDSSNPIERNVTA 566
             P   + Y AE +   S+ S VI   LVL FV++ ++  +  R   +    E+N  A
Sbjct: 185 ANPYECRFYNAEFSILSSMISFVIPCFLVL-FVYIRIIIALKKREKAAKMRREKNTIA 241


>Z81101-5|CAB03199.3|  705|Caenorhabditis elegans Hypothetical
           protein K09G1.4a protein.
          Length = 705

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
 Frame = +3

Query: 219 ILLALVMLVGSYVAGSIPLNVSMSEDKLKKV-TIFGAGLLVGTALAVIIPEGVRALFEHP 395
           ILL  V+    Y A S+P+  S     +K+V T+     LV   LA  +  GV  +    
Sbjct: 126 ILLLAVISFDRYRAVSLPIQYSRQSQNVKRVWTLIAVIWLVSLTLASPMVFGVN-VRPPD 184

Query: 396 HTPAVTKDYTAEPTHEDSLYS-VIGITLVLGFVFMLLVDQMSSRYNDSSNPIERNVTA 566
             P   + Y AE +   S+ S VI   LVL FV++ ++  +  R   +    E+N  A
Sbjct: 185 ANPYECRFYNAEFSILSSMISFVIPCFLVL-FVYIRIIIALKKREKAAKMRREKNTIA 241


>AB125702-1|BAD01496.1|  705|Caenorhabditis elegans D2-like dopamine
           receptor shortvariant protein.
          Length = 705

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
 Frame = +3

Query: 219 ILLALVMLVGSYVAGSIPLNVSMSEDKLKKV-TIFGAGLLVGTALAVIIPEGVRALFEHP 395
           ILL  V+    Y A S+P+  S     +K+V T+     LV   LA  +  GV  +    
Sbjct: 126 ILLLAVISFDRYRAVSLPIQYSRQSQNVKRVWTLIAVIWLVSLTLASPMVFGVN-VRPPD 184

Query: 396 HTPAVTKDYTAEPTHEDSLYS-VIGITLVLGFVFMLLVDQMSSRYNDSSNPIERNVTA 566
             P   + Y AE +   S+ S VI   LVL FV++ ++  +  R   +    E+N  A
Sbjct: 185 ANPYECRFYNAEFSILSSMISFVIPCFLVL-FVYIRIIIALKKREKAAKMRREKNTIA 241


>AB125701-1|BAD01495.1|  840|Caenorhabditis elegans D2-like dopamine
           receptor longvariant protein.
          Length = 840

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
 Frame = +3

Query: 219 ILLALVMLVGSYVAGSIPLNVSMSEDKLKKV-TIFGAGLLVGTALAVIIPEGVRALFEHP 395
           ILL  V+    Y A S+P+  S     +K+V T+     LV   LA  +  GV  +    
Sbjct: 126 ILLLAVISFDRYRAVSLPIQYSRQSQNVKRVWTLIAVIWLVSLTLASPMVFGVN-VRPPD 184

Query: 396 HTPAVTKDYTAEPTHEDSLYS-VIGITLVLGFVFMLLVDQMSSRYNDSSNPIERNVTA 566
             P   + Y AE +   S+ S VI   LVL FV++ ++  +  R   +    E+N  A
Sbjct: 185 ANPYECRFYNAEFSILSSMISFVIPCFLVL-FVYIRIIIALKKREKAAKMRREKNTIA 241


>Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical
           protein H13N06.5 protein.
          Length = 462

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +3

Query: 267 IPLNVSMSEDKLKKVTIFGAGLLVGTALAVIIPEGVRALFEHPHT 401
           I  N S S   LK +  FG+G L+G A   +IP    A   H H+
Sbjct: 181 IQANTSESGPLLKVLLAFGSGGLLGDAFLHLIPHATPAGDGHGHS 225


>AL110485-26|CAB60359.3|  779|Caenorhabditis elegans Hypothetical
           protein Y46G5A.17 protein.
          Length = 779

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 342 FRRAIRRQILSPFSVYPQT 286
           FRR + RQ +SPFS+ P+T
Sbjct: 283 FRRMVDRQEVSPFSISPRT 301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,091,996
Number of Sequences: 27780
Number of extensions: 256573
Number of successful extensions: 610
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)