Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12d03
(617 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 168 5e-43
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 167 1e-42
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 158 7e-40
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 151 8e-38
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 134 1e-32
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 115 5e-27
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 115 6e-27
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 98 8e-22
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 91 9e-20
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 78 9e-16
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 74 2e-14
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 73 3e-14
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 70 3e-13
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 62 8e-11
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 55 7e-09
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 55 7e-09
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 55 9e-09
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 54 2e-08
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 47 3e-06
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 45 1e-05
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 42 7e-05
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 37 0.002
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 31 0.10
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 0.71
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 29 0.71
SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr 2|... 28 0.94
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 28 1.2
SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces... 27 1.6
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 27 1.6
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 27 1.6
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 27 2.2
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 27 2.9
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 26 3.8
SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces p... 26 3.8
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 26 3.8
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 26 5.0
SPCC553.12c ||SPCC794.13|conserved fungal protein|Schizosaccharo... 26 5.0
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 25 6.6
SPBC887.14c |pfh1|pif1|pif1 helicase homolog Pfh1|Schizosaccharo... 25 6.6
SPBC1861.06c |mug131||S. pombe specific UPF0300 family protein 4... 25 6.6
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 25 8.8
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 25 8.8
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 168 bits (409), Expect = 5e-43
Identities = 80/150 (53%), Positives = 105/150 (70%)
Frame = +1
Query: 166 ESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIW 345
+ Y+YLFK ++IG +G GKS+LL F N+F + TIGVEF ++ + + K K QIW
Sbjct: 5 DEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIW 64
Query: 346 DTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPNIVILLVGNK 525
DTAGQER+R++T +YYRGA GAL+VYDIT + SF+ + WL++ R A NIVI+LVGNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNK 124
Query: 526 KDLEDSREVTFTEASQFALENELMFLETSA 615
DL R V+ EA FA EN L F+ETSA
Sbjct: 125 TDLLHLRAVSTEEAQAFAAENNLSFIETSA 154
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 167 bits (405), Expect = 1e-42
Identities = 74/147 (50%), Positives = 108/147 (73%), Gaps = 4/147 (2%)
Frame = +1
Query: 166 ESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIG----GKSTK 333
ESY+YL K ++ G +GTGKS LL F+ N++ + HT+G++F S+I+++G K K
Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63
Query: 334 LQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPNIVILL 513
LQIWDTAGQE+FRSV R+YYRGAAGA+LVYD+T++DSF L++WL D R +A I ++L
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVL 123
Query: 514 VGNKKDLEDSREVTFTEASQFALENEL 594
G+K DL++ R+V+ EA++F E +
Sbjct: 124 AGSKSDLQNQRQVSTEEAAEFCSEKHI 150
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 158 bits (383), Expect = 7e-40
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = +1
Query: 160 MSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQ 339
M+ Y+YLFK L+IG +G GKS LL F + + E TIGV+F + + GK+ KLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Query: 340 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPNIVILLVG 519
IWDTAGQERFR++T SYYRGA G ++VYD+T +DSFN + WL++ A + LLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVG 120
Query: 520 NKKDLEDSREVTFTEASQFALENELMFLETSA 615
NK D+ D + V ++ A +FA + FLETSA
Sbjct: 121 NKSDMVDKKVVEYSVAKEFADSLNIPFLETSA 152
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 151 bits (366), Expect = 8e-38
Identities = 71/151 (47%), Positives = 98/151 (64%)
Frame = +1
Query: 163 SESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQI 342
++SY+YL K L+IG +G GKS LL F + F TIG++F + + + GK KLQI
Sbjct: 3 TKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQI 62
Query: 343 WDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPNIVILLVGN 522
WDTAGQERFR++T +YYRGA G LL+YD+T + SF+ + W + AS N+ +L+GN
Sbjct: 63 WDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGN 122
Query: 523 KKDLEDSREVTFTEASQFALENELMFLETSA 615
K D ED R+V+F + A E + FLE SA
Sbjct: 123 KCDCEDQRQVSFEQGQALADELGVKFLEASA 153
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 134 bits (323), Expect = 1e-32
Identities = 66/155 (42%), Positives = 100/155 (64%), Gaps = 3/155 (1%)
Frame = +1
Query: 160 MSESYEYL---FKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKST 330
MSE+Y + FK + +G GK+SL+ F+ ++F TIG++F SK + + ++
Sbjct: 1 MSENYSFSLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTV 60
Query: 331 KLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPNIVIL 510
+LQ+WDTAGQERFRS+ SY R ++ A++VYDIT+ +SF W+ D R +++I+
Sbjct: 61 RLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIV 120
Query: 511 LVGNKKDLEDSREVTFTEASQFALENELMFLETSA 615
LVGNK DL D R+VT E + A E ++M +ETSA
Sbjct: 121 LVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSA 155
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 115 bits (277), Expect = 5e-27
Identities = 61/158 (38%), Positives = 97/158 (61%), Gaps = 6/158 (3%)
Frame = +1
Query: 160 MSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQ 339
M+ ++L K +++G +G GK+S++N ++ KF +D TIG +F +K V + K LQ
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQ 60
Query: 340 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPN----IVI 507
+WDTAGQERF+S+ ++YRGA +LVYD+ + SF L +W + ASP+
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPF 120
Query: 508 LLVGNKKDLED-SREVTFTEASQFA-LENELMFLETSA 615
+L+GNK D+E+ R V+ ++A F E+ + ETSA
Sbjct: 121 ILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSA 158
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 115 bits (276), Expect = 6e-27
Identities = 61/145 (42%), Positives = 89/145 (61%), Gaps = 2/145 (1%)
Frame = +1
Query: 187 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIG-GKSTKLQIWDTAGQE 363
K +++G + GKSSL+ F+ ++F + R TIG F ++ + I S KL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 364 RFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPNIVILLVGNKKDL-ED 540
R++S+ YYR A A++VYDIT S +W+++ + A IVI L GNK DL ++
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 541 SREVTFTEASQFALENELMFLETSA 615
R V +A +A E L+F ETSA
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSA 160
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 98.3 bits (234), Expect = 8e-22
Identities = 47/132 (35%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
Frame = +1
Query: 160 MSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQ 339
MS K +++G +G GK+ L+N F+ KF + TIG +F +K V + K LQ
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 340 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPN---IVIL 510
+WDTAGQERF+S+ ++YRGA ++VY++ + SF+++ NW ++ S + +
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFI 120
Query: 511 LVGNKKDLEDSR 546
+VGN+ D + S+
Sbjct: 121 IVGNQIDKDASK 132
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 91.5 bits (217), Expect = 9e-20
Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Frame = +1
Query: 160 MSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQ 339
M +Y +K +V+G G GKS+L I + F ++ TI + K I G+ L
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKC-EIDGEGALLD 59
Query: 340 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRD-ARTLASPNIVILLV 516
+ DTAGQE + ++ Y R G LLVY+ITSR SF+ ++ + + R ++LV
Sbjct: 60 VLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLV 119
Query: 517 GNKKDLEDSREVTFTEASQFALENELMFLETSA 615
NK DLE R V+ E Q A +++ETSA
Sbjct: 120 ANKCDLEAERVVSRAEGEQLAKSMHCLYVETSA 152
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 78.2 bits (184), Expect = 9e-16
Identities = 43/144 (29%), Positives = 77/144 (53%)
Frame = +1
Query: 184 FKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQE 363
FK +++G GTGK++ + + +F++ T+GVE + +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 364 RFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPNIVILLVGNKKDLEDS 543
+ + YY ++++D+TSR ++ + +W RD + NI I+L GNK D+++
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCE-NIPIVLCGNKVDVKE- 127
Query: 544 REVTFTEASQFALENELMFLETSA 615
R+V +A F + L + + SA
Sbjct: 128 RKVK-AKAITFHRKKNLQYYDISA 150
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 73.7 bits (173), Expect = 2e-14
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Frame = +1
Query: 196 VIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQERFRS 375
+IG + GK+SL+ ++ F E+ T+GV F K ++I IWD GQ F +
Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 74
Query: 376 VTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPNIVILLVGNKKD------LE 537
+ A L ++D++ + + N++ W R AR + V +L+G K D E
Sbjct: 75 MLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGF-NKTAVPILIGTKYDHFMTFPRE 133
Query: 538 DSREVTFTEASQF--ALENELMFLETS 612
D E+T +A ++ A++ L+F TS
Sbjct: 134 DQEEIT-KQARRYAKAMKASLVFCSTS 159
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 73.3 bits (172), Expect = 3e-14
Identities = 51/145 (35%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Frame = +1
Query: 187 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 366
+ V+GS GKSSL ++ N F E TI F SK + G+ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIIDTAGQDE 66
Query: 367 FRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRD--ARTLASPNIVILLVGNKKDLED 540
+ + + G G +LVY ITS+ SF + +RD + + I++VGNK DL
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFE-MVKIVRDKILNHTGTEWVPIVVVGNKSDLHM 125
Query: 541 SREVTFTEASQFALENELMFLETSA 615
R VT E A E + + E SA
Sbjct: 126 QRAVTAEEGKALANEWKCAWTEASA 150
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 69.7 bits (163), Expect = 3e-13
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +1
Query: 160 MSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQ 339
M +S K +V+G GK+SLL+ F F + T+ + S + GKS +L
Sbjct: 1 MLQSQPIRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDC-RVDGKSVQLA 59
Query: 340 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSF-NALANWLRDARTLASPNIVILLV 516
+WDTAGQE + + Y A L+ + I S DS N W+ + TL PN+ +LV
Sbjct: 60 LWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC-PNVPFILV 118
Query: 517 GNKKDL 534
G K DL
Sbjct: 119 GMKADL 124
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 61.7 bits (143), Expect = 8e-11
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +1
Query: 187 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 366
K +++G GK+SLLN F F + TI + I + G S +L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIF-VDGNSIELSLWDTAGQEE 73
Query: 367 FRSVTRSYYRGAAGALLVYDITSRDSF-NALANWLRDARTLASPNIVILLVGNKKDLEDS 543
+ + Y ++ + + SRDS N + WL + + P + ++LV K DL +
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSS-NCPGVKLVLVALKCDLRGA 132
Query: 544 RE 549
E
Sbjct: 133 DE 134
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 55.2 bits (127), Expect = 7e-09
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +1
Query: 187 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 366
K +V+G GK+ LL ++ NKF D T+ + ++ IG + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVM-IGDEPYTLGLFDTAGQED 63
Query: 367 FRSVTRSYYRGAAGALLVYDITSRDSF-NALANWLRDARTLASPNIVILLVGNKKDLEDS 543
+ + Y L+ + +TS SF N W + P + L+VG + DL D
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHH-HCPGVPCLIVGTQIDLRDD 122
Query: 544 REV 552
V
Sbjct: 123 PSV 125
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 55.2 bits (127), Expect = 7e-09
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Frame = +1
Query: 187 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 366
K +++G GK+ LL F F E T+ + + V + G+ +L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHIELALWDTAGQED 66
Query: 367 FRSVTRSYYRGAAGALLVYDITSRDSF-NALANWLRDARTLASPNIVILLVGNKKDLEDS 543
+ + Y + L+ + + + +S N W+ + S N+ ILLVG K DL +
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCS-NLPILLVGCKVDLRND 125
Query: 544 REVTFTEASQ 573
+ T E S+
Sbjct: 126 PK-TIEELSK 134
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 54.8 bits (126), Expect = 9e-09
Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Frame = +1
Query: 187 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIV-NIGGKSTKLQIWDTAGQE 363
K +V+G G GK+ LL F F E T+ + + I K +L +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 364 RFRSVTRSYYRGAAGALLVYDITSRDSFNALA-NWLRDARTLASPNIVILLVGNKKDLED 540
+ + Y + LL + I S N + W + + P I+LVG K DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFC-PRTPIVLVGLKADLRK 134
Query: 541 SREVT 555
R T
Sbjct: 135 DRNAT 139
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 53.6 bits (123), Expect = 2e-08
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Frame = +1
Query: 187 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 366
K +++G GK+ LL F F E T+ + + V + G+ +L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHVELALWDTAGQED 66
Query: 367 FRSVTRSYYRGAAGALLVYDITSRDSF-NALANWLRDARTLASPNIVILLVGNKKDLEDS 543
+ + Y + L+ + + S DS N W+ + S ++ ILLV K DL +
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCS-SLPILLVACKADLRND 125
Query: 544 REV 552
++
Sbjct: 126 PKI 128
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 46.8 bits (106), Expect = 3e-06
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Frame = +1
Query: 187 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCH---TIGVEFGSKIVNIGGKSTKLQIWDTAG 357
K L++G +G+GKSS+ + N +D TI +E S + +G + L +WD G
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEH-SHVRFLG--NLVLNLWDCGG 60
Query: 358 QERFR----SVTRSY-YRGAAGALLVYDITSRDSFNALANWLR--DARTLASPNIVILLV 516
QE F S R + +R + V+D+ SR+ L + +A SP + +
Sbjct: 61 QEAFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVANSPQARVFCL 120
Query: 517 GNKKDL--EDSREVTFTEASQFALE 585
+K DL ED R++ F E LE
Sbjct: 121 IHKMDLVQEDLRDLVFEERKAILLE 145
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 44.8 bits (101), Expect = 1e-05
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Frame = +1
Query: 187 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 366
+ L++G GK+++L K K ++ G + + K+ K +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILY-----KLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDK 77
Query: 367 FRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASP----NIVILLVGNKKDL 534
R + R Y+ G G + V D S DS N ++ ++ + S + ++L++ NK+DL
Sbjct: 78 IRPLWRHYFTGTKGLIFVVD--SADS-NRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 41.9 bits (94), Expect = 7e-05
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +1
Query: 187 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 366
+ L++G GK+++L K K T G + + ++ +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILY-----KLKLGEIVTTIPTIGFNVETVEYRNISFTVWDVGGQDK 73
Query: 367 FRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPNIVILLV-GNKKDLEDS 543
R + R Y++ G + V D R+ + L+ +LLV NK+DL ++
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDLPNA 133
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 37.1 bits (82), Expect = 0.002
Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Frame = +1
Query: 145 LKVTNMSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGK 324
L + + E + L++G GK+++L + E + FG +I + +
Sbjct: 4 LTILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDVNE-----VSPTFGFQIRTLEVE 58
Query: 325 STKLQIWDTAGQERFRSVTRSYYRGAAGALLVY----DITSRDSFNALANWLRDARTLAS 492
+ IWD GQ+ R+ ++Y+ + V D+ + N L L + + L +
Sbjct: 59 GLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFT 118
Query: 493 PNIVILLVGNKKDL 534
IL++ NK D+
Sbjct: 119 S---ILVLANKSDV 129
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 31.5 bits (68), Expect = 0.10
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 196 VIGSAGTGKSSLLNNFIGNKF 258
V+GS TGKS+LLNN G F
Sbjct: 44 VLGSQSTGKSTLLNNLFGTSF 64
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 28.7 bits (61), Expect = 0.71
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +1
Query: 181 LFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTI--GVEFGSKIVNIGGKSTKLQIWDTA 354
+F V+GS GK++LL++FI N +T+ VEF S + + +
Sbjct: 421 VFLCFVVGSKSCGKTALLSSFINNNTNRLTPNTVVNSVEFQS--------TQRYLVLSEI 472
Query: 355 GQERFRSVTRSYYRGAAGAL-LVYDITSRDSFNALANWL 468
G+ + A L L+YD ++ +SF+ +AN L
Sbjct: 473 GETDLDILAEPKSLEACDILCLLYDSSNPNSFSFIANLL 511
Score = 27.9 bits (59), Expect = 1.2
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Frame = +1
Query: 187 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNI-----GGKSTKLQIWDT 351
+ ++ G G GKSSL++ I +ED +I F I++I L + DT
Sbjct: 5 RVVICGDQGVGKSSLISALI----QEDNVTSIPKVF--PIISIPSNPDSNDDVSLVLVDT 58
Query: 352 AGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALA-NWLRDARTLASPNIVILLVGNK- 525
R + + A LVY + S+ ++ WL R+L N+ I+L NK
Sbjct: 59 QSDSNEREYLAAEIKKANVICLVY--SDNYSYERVSIFWLPYFRSL-GVNVPIVLCENKS 115
Query: 526 KDLEDSREVTFTEASQFALENELMFLE 606
+DL++ + + E L NE +E
Sbjct: 116 EDLDNYQGLHTIEHEMIPLINEFKEIE 142
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 121 YLNPTRLNLKVTNMSESYEYLFKFLVIGSAGTGKSSLL 234
Y + R +L + N+S S E K ++G +G+GKS+L+
Sbjct: 1108 YPDSERNHLALNNVSLSIEAREKVAIVGISGSGKSTLV 1145
>SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 781
Score = 28.3 bits (60), Expect = 0.94
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 193 LVIGSAGTGKSSLLNNFIGNKF 258
+V+GS GKSS+L N +G F
Sbjct: 30 VVVGSQSCGKSSVLENIVGKDF 51
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 184 FKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFG 297
F LV+G +G+GKS+L+N + ++ +FG
Sbjct: 96 FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDFG 133
>SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 735
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 274 HTIGVEFGSKIVNIGGKSTKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDI 429
H + E+G++ VNI G + + W A E + S+ R A GA D+
Sbjct: 663 HRVEAEYGNQGVNIKGVAREGFGWVNASYEVGLTFCNSHMRRALGACTTPDV 714
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 193 LVIGSAGTGKSSLLNNFIGNKF 258
+VIGS +GKSS+L +G++F
Sbjct: 267 VVIGSQSSGKSSVLEAIVGHEF 288
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 196 VIGSAGTGKSSLLNNFIGNKFK 261
+ G G GKSSLL +GN +K
Sbjct: 612 IFGKVGAGKSSLLEACMGNMYK 633
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 415 LVYDITSRDSFNALANWLRDARTLASPNIV 504
L YD T D FN L +W+ + L+SP+ +
Sbjct: 203 LTYDGTV-DVFNGLTDWIYEEEVLSSPSTI 231
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 2.9
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1
Query: 178 YLFKFLVIGSAGTGKSSLLN 237
+ F +V+G +G+GKS+L+N
Sbjct: 31 FQFNVMVVGPSGSGKSTLIN 50
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 26.2 bits (55), Expect = 3.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +1
Query: 193 LVIGSAGTGKSSLLNNFIG----NKFKEDRCHTIGVEFGSKI 306
+VIG G+GKSSL++ +G NK + + GV + S++
Sbjct: 645 IVIGPTGSGKSSLISALLGELSLNKGSYNLPRSKGVSYVSQV 686
>SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 472
Score = 26.2 bits (55), Expect = 3.8
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +1
Query: 220 KSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIW-DTAGQERFRSVTR---S 387
K+ +NN N+F+ED C + ++ S + + T+ + D G R S R S
Sbjct: 255 KAEQMNN--ANQFREDVC-ALELDLQSTMPHYSLFHTEGPLRRDLIGLLRAYSYYRFDTS 311
Query: 388 YYRGAA--GALLVYDITSRDSFNALANWL 468
Y G + GALL+ ++ +FN LAN L
Sbjct: 312 YIPGTSFIGALLLLNMNLTSAFNCLANLL 340
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 196 VIGSAGTGKSSLLNNFIGNKFK 261
++G G GKSSLL +GN K
Sbjct: 614 IVGKVGMGKSSLLEACLGNMQK 635
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +1
Query: 124 LNPTRLNLKVTNMSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVE 291
LN L K N+ + E ++ G++GTGK++ N + ++ + E
Sbjct: 11 LNLDSLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKE 66
>SPCC553.12c ||SPCC794.13|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 521
Score = 25.8 bits (54), Expect = 5.0
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +3
Query: 348 HSWTGTVSICDQI 386
+SWTGTVS+C+ +
Sbjct: 303 YSWTGTVSLCNLV 315
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 196 VIGSAGTGKSSLLNNFIG 249
++G GTGKS+LLN G
Sbjct: 421 IVGKNGTGKSTLLNLITG 438
>SPBC887.14c |pfh1|pif1|pif1 helicase homolog
Pfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 805
Score = 25.4 bits (53), Expect = 6.6
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +1
Query: 202 GSAGTGKSSLLNNFI---GNKFKE--DRCHTIGVEFGSKIVNIGG 321
GSAGTGKS LL I +K+++ DR + G NIGG
Sbjct: 332 GSAGTGKSVLLRKIIEVLKSKYRKQSDRV-AVTASTGLAACNIGG 375
>SPBC1861.06c |mug131||S. pombe specific UPF0300 family protein
4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 25.4 bits (53), Expect = 6.6
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +1
Query: 73 SYNVLILTKY*KPKIVYLNPTRLNLKVTNMSESYEYLFKFLVIGSAGTGKSSLLNNFIGN 252
++N + + P I+Y N N+ V N+ + Y+++ + ++SL + F+
Sbjct: 339 NFNAKLYEECIPPSILYFNKNDENINVGNIEDITNYMYETFI------NEASLCDKFM-- 390
Query: 253 KFKEDRCHTIGVEFGSKIVN 312
K K +R T G +I N
Sbjct: 391 KRKHERIETPLSSQGREISN 410
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 25.0 bits (52), Expect = 8.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 466 LRDARTLASPNIVILLVGNKKDLEDSREVT 555
LR LA N+V L NK+D+ S E++
Sbjct: 147 LRRGIQLAVDNVVEFLQANKRDITTSEEIS 176
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 25.0 bits (52), Expect = 8.8
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1
Query: 178 YLFKFLVIGSAGTGKSSL 231
Y + F+VIG AG+GK+++
Sbjct: 13 YKYVFVVIGPAGSGKTTM 30
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,387,640
Number of Sequences: 5004
Number of extensions: 48535
Number of successful extensions: 196
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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