Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12c23
         (538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20362-1|AAA86720.1|  824|Homo sapiens Tg737 protein.                  33   0.64 
BC030776-1|AAH30776.2|  833|Homo sapiens intraflagellar transpor...    33   0.64 
AL590096-4|CAM20430.1|  824|Homo sapiens intraflagellar transpor...    33   0.64 
AL590096-3|CAI14390.2|  833|Homo sapiens intraflagellar transpor...    33   0.64 
AL161772-3|CAM13405.1|  824|Homo sapiens intraflagellar transpor...    33   0.64 
AL161772-2|CAH70874.2|  833|Homo sapiens intraflagellar transpor...    33   0.64 

>U20362-1|AAA86720.1|  824|Homo sapiens Tg737 protein.
          Length = 824

 Score = 33.1 bits (72), Expect = 0.64
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = +1

Query: 1   FLHAYVVHTQFYINLIRSFDRFSLVFPLQVQFFSSWSLLDKYV*FGRSGCY 153
           +L AY + TQF+   I+ F+R SL+ P QV+    W L+     F RSG Y
Sbjct: 625 WLGAYYIDTQFWEKAIQYFERASLIQPTQVK----WQLMVASC-FRRSGNY 670


>BC030776-1|AAH30776.2|  833|Homo sapiens intraflagellar transport
           88 homolog (Chlamydomonas) protein.
          Length = 833

 Score = 33.1 bits (72), Expect = 0.64
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = +1

Query: 1   FLHAYVVHTQFYINLIRSFDRFSLVFPLQVQFFSSWSLLDKYV*FGRSGCY 153
           +L AY + TQF+   I+ F+R SL+ P QV+    W L+     F RSG Y
Sbjct: 634 WLGAYYIDTQFWEKAIQYFERASLIQPTQVK----WQLMVASC-FRRSGNY 679


>AL590096-4|CAM20430.1|  824|Homo sapiens intraflagellar transport
           88 homolog (Chlamydomonas) protein.
          Length = 824

 Score = 33.1 bits (72), Expect = 0.64
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = +1

Query: 1   FLHAYVVHTQFYINLIRSFDRFSLVFPLQVQFFSSWSLLDKYV*FGRSGCY 153
           +L AY + TQF+   I+ F+R SL+ P QV+    W L+     F RSG Y
Sbjct: 625 WLGAYYIDTQFWEKAIQYFERASLIQPTQVK----WQLMVASC-FRRSGNY 670


>AL590096-3|CAI14390.2|  833|Homo sapiens intraflagellar transport
           88 homolog (Chlamydomonas) protein.
          Length = 833

 Score = 33.1 bits (72), Expect = 0.64
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = +1

Query: 1   FLHAYVVHTQFYINLIRSFDRFSLVFPLQVQFFSSWSLLDKYV*FGRSGCY 153
           +L AY + TQF+   I+ F+R SL+ P QV+    W L+     F RSG Y
Sbjct: 634 WLGAYYIDTQFWEKAIQYFERASLIQPTQVK----WQLMVASC-FRRSGNY 679


>AL161772-3|CAM13405.1|  824|Homo sapiens intraflagellar transport
           88 homolog (Chlamydomonas) protein.
          Length = 824

 Score = 33.1 bits (72), Expect = 0.64
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = +1

Query: 1   FLHAYVVHTQFYINLIRSFDRFSLVFPLQVQFFSSWSLLDKYV*FGRSGCY 153
           +L AY + TQF+   I+ F+R SL+ P QV+    W L+     F RSG Y
Sbjct: 625 WLGAYYIDTQFWEKAIQYFERASLIQPTQVK----WQLMVASC-FRRSGNY 670


>AL161772-2|CAH70874.2|  833|Homo sapiens intraflagellar transport
           88 homolog (Chlamydomonas) protein.
          Length = 833

 Score = 33.1 bits (72), Expect = 0.64
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = +1

Query: 1   FLHAYVVHTQFYINLIRSFDRFSLVFPLQVQFFSSWSLLDKYV*FGRSGCY 153
           +L AY + TQF+   I+ F+R SL+ P QV+    W L+     F RSG Y
Sbjct: 634 WLGAYYIDTQFWEKAIQYFERASLIQPTQVK----WQLMVASC-FRRSGNY 679


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,244,460
Number of Sequences: 237096
Number of extensions: 1342372
Number of successful extensions: 2008
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2008
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)