Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12c16
         (525 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060840-1|AAH60840.1|  298|Homo sapiens N-ethylmaleimide-sensit...    31   3.3  
BC047426-1|AAH47426.1|  204|Homo sapiens NAPB protein protein.         31   3.3  
AL096677-4|CAI20156.1|  298|Homo sapiens N-ethylmaleimide-sensit...    31   3.3  
AK096494-1|BAC04804.1|  276|Homo sapiens protein ( Homo sapiens ...    31   3.3  

>BC060840-1|AAH60840.1|  298|Homo sapiens N-ethylmaleimide-sensitive
           factor attachment protein, beta protein.
          Length = 298

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -3

Query: 487 IGHFPEIPTSYLLEDPTRSLNVRQM-IYMLACDAIQYNKKVQKIPRDGSYNMKKTLQNYS 311
           I H+ +    Y  E+   S N   + +   A    QY K ++   + G+  M   L  YS
Sbjct: 142 IAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYS 201

Query: 310 FHDCFFKFSI*H 275
             D FFK ++ H
Sbjct: 202 AKDYFFKAALCH 213


>BC047426-1|AAH47426.1|  204|Homo sapiens NAPB protein protein.
          Length = 204

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -3

Query: 487 IGHFPEIPTSYLLEDPTRSLNVRQM-IYMLACDAIQYNKKVQKIPRDGSYNMKKTLQNYS 311
           I H+ +    Y  E+   S N   + +   A    QY K ++   + G+  M   L  YS
Sbjct: 48  IAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYS 107

Query: 310 FHDCFFKFSI*H 275
             D FFK ++ H
Sbjct: 108 AKDYFFKAALCH 119


>AL096677-4|CAI20156.1|  298|Homo sapiens N-ethylmaleimide-sensitive
           factor attachment protein, beta protein.
          Length = 298

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -3

Query: 487 IGHFPEIPTSYLLEDPTRSLNVRQM-IYMLACDAIQYNKKVQKIPRDGSYNMKKTLQNYS 311
           I H+ +    Y  E+   S N   + +   A    QY K ++   + G+  M   L  YS
Sbjct: 142 IAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYS 201

Query: 310 FHDCFFKFSI*H 275
             D FFK ++ H
Sbjct: 202 AKDYFFKAALCH 213


>AK096494-1|BAC04804.1|  276|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39175 fis, clone OCBBF2003593, highly similar to
           BETA-SOLUBLE NSF ATTACHMENT PROTEIN. ).
          Length = 276

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -3

Query: 487 IGHFPEIPTSYLLEDPTRSLNVRQM-IYMLACDAIQYNKKVQKIPRDGSYNMKKTLQNYS 311
           I H+ +    Y  E+   S N   + +   A    QY K ++   + G+  M   L  YS
Sbjct: 142 IAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYS 201

Query: 310 FHDCFFKFSI*H 275
             D FFK ++ H
Sbjct: 202 AKDYFFKAALCH 213


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,374,514
Number of Sequences: 237096
Number of extensions: 1321810
Number of successful extensions: 2099
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2099
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)