BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12c16
(525 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003170-1|AAO24925.1| 720|Drosophila melanogaster SD10041p pro... 29 2.9
AY089292-1|AAL90030.1| 915|Drosophila melanogaster AT08673p pro... 29 2.9
AF197914-1|AAF04853.1| 711|Drosophila melanogaster protein kina... 29 2.9
AE014134-3265|AAF53911.1| 711|Drosophila melanogaster CG2615-PA... 29 2.9
AE014134-3264|AAN11082.1| 720|Drosophila melanogaster CG2615-PB... 29 2.9
AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-P... 29 2.9
BT022880-1|AAY55296.1| 866|Drosophila melanogaster IP12895p pro... 28 8.9
BT022845-1|AAY55261.1| 866|Drosophila melanogaster IP12995p pro... 28 8.9
AE014134-2866|AAF53629.3| 876|Drosophila melanogaster CG15145-P... 28 8.9
>BT003170-1|AAO24925.1| 720|Drosophila melanogaster SD10041p
protein.
Length = 720
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +2
Query: 296 KTIVKTIILQCLFHIIRAITWYFLNFFIVLNSVARKHVYHLPDVKRTSRI 445
KT+V T +L L R TW F FF + + RK V H+ RTS +
Sbjct: 276 KTLV-TPLLAGLLEENREKTWSFDRFFHEVTLILRKRVIHVFFTNRTSSV 324
>AY089292-1|AAL90030.1| 915|Drosophila melanogaster AT08673p
protein.
Length = 915
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 47 CGLFFFENRESFRVIMVNTFNVSGFKRESSPVCGISFHMSDSLINFY*CEHI--FLKCEI 220
CG+ E E F +V F ++G + S CG SF S+ L EH+ LKC +
Sbjct: 211 CGMSLPEQSE-FERHVVGHFLITGSEFNCSSSCGKSFAKSEDLQQHLLSEHVLTLLKCSL 269
>AF197914-1|AAF04853.1| 711|Drosophila melanogaster protein kinase
DIK2 protein.
Length = 711
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +2
Query: 296 KTIVKTIILQCLFHIIRAITWYFLNFFIVLNSVARKHVYHLPDVKRTSRI 445
KT+V T +L L R TW F FF + + RK V H+ RTS +
Sbjct: 276 KTLV-TPLLAGLLEENREKTWSFDRFFHEVTLILRKRVIHVFFTNRTSSV 324
>AE014134-3265|AAF53911.1| 711|Drosophila melanogaster CG2615-PA,
isoform A protein.
Length = 711
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +2
Query: 296 KTIVKTIILQCLFHIIRAITWYFLNFFIVLNSVARKHVYHLPDVKRTSRI 445
KT+V T +L L R TW F FF + + RK V H+ RTS +
Sbjct: 276 KTLV-TPLLAGLLEENREKTWSFDRFFHEVTLILRKRVIHVFFTNRTSSV 324
>AE014134-3264|AAN11082.1| 720|Drosophila melanogaster CG2615-PB,
isoform B protein.
Length = 720
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +2
Query: 296 KTIVKTIILQCLFHIIRAITWYFLNFFIVLNSVARKHVYHLPDVKRTSRI 445
KT+V T +L L R TW F FF + + RK V H+ RTS +
Sbjct: 276 KTLV-TPLLAGLLEENREKTWSFDRFFHEVTLILRKRVIHVFFTNRTSSV 324
>AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-PA
protein.
Length = 1290
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 47 CGLFFFENRESFRVIMVNTFNVSGFKRESSPVCGISFHMSDSLINFY*CEHI--FLKCEI 220
CG+ E E F +V F ++G + S CG SF S+ L EH+ LKC +
Sbjct: 586 CGMSLPEQSE-FERHVVGHFLITGSEFNCSSSCGKSFAKSEDLQQHLLSEHVLTLLKCSL 644
>BT022880-1|AAY55296.1| 866|Drosophila melanogaster IP12895p
protein.
Length = 866
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 237 IIMRKNISHFKNMCSH**KFINESDIWKDIPQTGEDSRLKPLTLKVFTMITRKLSRFSKK 58
+++ + SH +N+ S F E +W+ +PQT D P T +I R+L +K
Sbjct: 760 VVVHRAYSH-ENLTSSA-NFRLEKGVWQQLPQTESDFSYDPST----KIIKRQLLSLERK 813
Query: 57 NKPQAV 40
N V
Sbjct: 814 NSSSTV 819
>BT022845-1|AAY55261.1| 866|Drosophila melanogaster IP12995p
protein.
Length = 866
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 237 IIMRKNISHFKNMCSH**KFINESDIWKDIPQTGEDSRLKPLTLKVFTMITRKLSRFSKK 58
+++ + SH +N+ S F E +W+ +PQT D P T +I R+L +K
Sbjct: 760 VVVHRAYSH-ENLTSSA-NFRLEKGVWQQLPQTESDFSYDPST----KIIKRQLLSLERK 813
Query: 57 NKPQAV 40
N V
Sbjct: 814 NSSSTV 819
>AE014134-2866|AAF53629.3| 876|Drosophila melanogaster CG15145-PA
protein.
Length = 876
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 237 IIMRKNISHFKNMCSH**KFINESDIWKDIPQTGEDSRLKPLTLKVFTMITRKLSRFSKK 58
+++ + SH +N+ S F E +W+ +PQT D P T +I R+L +K
Sbjct: 770 VVVHRAYSH-ENLTSSA-NFRLEKGVWQQLPQTESDFSYDPST----KIIKRQLLSLERK 823
Query: 57 NKPQAV 40
N V
Sbjct: 824 NSSSTV 829
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,566,874
Number of Sequences: 53049
Number of extensions: 416503
Number of successful extensions: 940
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -