Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12c11
(673 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 38 0.001
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 37 0.003
SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone... 34 0.016
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 33 0.037
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 33 0.050
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 32 0.086
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 31 0.11
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 31 0.15
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 31 0.20
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 31 0.20
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 30 0.26
SPBC13E7.08c |||RNA polymerase II associated Paf1 complex |Schiz... 30 0.26
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 30 0.26
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 30 0.35
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.35
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 29 0.46
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 29 0.46
SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|c... 29 0.61
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 29 0.61
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 29 0.61
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 29 0.81
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 28 1.1
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 28 1.1
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 28 1.4
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 1.9
SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces pomb... 27 1.9
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 27 1.9
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 27 1.9
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 27 1.9
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 27 2.5
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 27 3.3
SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr... 27 3.3
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 27 3.3
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 27 3.3
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 27 3.3
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 26 4.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 5.7
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 5.7
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 25 7.5
SPBC18H10.09 |||zinc finger protein, zf-CHY type|Schizosaccharom... 25 9.9
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 25 9.9
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 25 9.9
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 25 9.9
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 37.9 bits (84), Expect = 0.001
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +1
Query: 286 KDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKT---- 453
+DL+ L+ L+++ + D E+ + +N + S ED + +D R+
Sbjct: 3993 EDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESDLVSKEDDNKALEDKDRQEKEDE 4052
Query: 454 EDKDSDETVFDVLEPDSKEEPKLPPPIVED 543
E+ D + D ++PD +E PPP ED
Sbjct: 4053 EEMSDDVGIDDEIQPDIQENNSQPPPENED 4082
Score = 31.5 bits (68), Expect = 0.11
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = +1
Query: 211 KEEQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEID-----SGD 375
KE+ + D+ + + D + E+ + E+N P EN++ +D D
Sbjct: 4034 KEDDNKALEDKDRQEKEDEEEMSDDVGIDDEIQPDIQENNSQPPPENEDHLDLPEDLKLD 4093
Query: 376 GFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKI 555
E ++ ED D ++ D + DE + D +P +E L I +D+
Sbjct: 4094 EKEGDVSKDSDLEDMDMEAADENKEEADAEKDEPMQDFEDP-LEENNTLDEDIQQDDFSD 4152
Query: 556 FLEAQE 573
E E
Sbjct: 4153 LAEDDE 4158
Score = 27.5 bits (58), Expect = 1.9
Identities = 24/102 (23%), Positives = 45/102 (44%)
Frame = +1
Query: 214 EEQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNI 393
E+ + +Q D L E +DE +D ++L + N D +EN +E + + ED +
Sbjct: 4123 EKDEPMQDFEDPLEENNTLDEDIQQDDFSDLAEDDEKMNEDGFEENVQE--NEESTEDGV 4180
Query: 394 ETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPK 519
++ + E + +D A K ++ F E D + K
Sbjct: 4181 KSDEELEQGE-VPEDQAIDNHPKMDAKSTFASAEADEENTDK 4221
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 36.7 bits (81), Expect = 0.003
Identities = 25/104 (24%), Positives = 52/104 (50%)
Frame = +1
Query: 265 LVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNA 444
L+DEG++++ E + D D D+E +++ G + ++ET +S E+ S + +
Sbjct: 196 LIDEGEEEEEREEAELEFVSD--DEDEEEISDLEDWLGSDQSMETSESEEE--ESSESES 251
Query: 445 RKTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFLEAQEI 576
+ ED+D+ + D+K+ K P + E + E ++I
Sbjct: 252 DEDEDEDNKGKIRKRKTDDAKKSRKKRAPHIHIEYEQERENEKI 295
>SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 195
Score = 34.3 bits (75), Expect = 0.016
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +1
Query: 256 EMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEI 363
E+ +D+ DK+L+ DNY+ + + DP Q+NK+++
Sbjct: 109 EIKAIDQYVDKELSPMYDNYVNKPSNDPKQKNKQKL 144
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 33.1 bits (72), Expect = 0.037
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Frame = +1
Query: 250 LSEMILVDEGKDKDLAAELDNYLYEDNRD------PDQENKEEIDSGDGFEDNIETIDSA 411
LS LVDE +++ ++ D L D D+E++EE +S D + +DSA
Sbjct: 117 LSGNFLVDEEDEEEEESDEDYDLSPTEEDLVETVSGDEESEEESESEDNSASEEDELDSA 176
Query: 412 EDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFLEAQE 573
AK +Q ++T+D+ E + ++K++ K+ V+++K F E E
Sbjct: 177 -PAKKAQV-KKKRTKDESEQEEAASPKKNNTKKQ-KVEGTPVKEKKVAFAEKLE 227
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 32.7 bits (71), Expect = 0.050
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +1
Query: 217 EQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNIE 396
E++ Q+ +++ L E K + L + + + D EN +I+ GD DN+
Sbjct: 964 EEEVKQSVSEQVDSAQLTSEPKSESLPKSPEEKSDDTSNDVTTENTNDIN-GDSNMDNVA 1022
Query: 397 TIDSAEDAKNSQQDNARKTEDKDSDE 474
T+D + DA ++ T +E
Sbjct: 1023 TVDKSTDAVDTSTATVAATTTTAEEE 1048
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 31.9 bits (69), Expect = 0.086
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +1
Query: 307 DNYL-YEDNRDPDQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVF 483
DN L + D+ + D+ + EEI+S + F ++TI ++ + S + N K + V
Sbjct: 170 DNELKFNDSDEEDEVDDEEIESFNSFSRKMQTISNSR-YRGSPKPNIEKQSCSSESDRVS 228
Query: 484 DVLEPDSKEEPKLPPPIVEDEKKIFLEAQE 573
+ + + EE EDE+ +E E
Sbjct: 229 QISDDEEDEEGSADE---EDEEDSDVELSE 255
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 31.5 bits (68), Expect = 0.11
Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +1
Query: 271 DEGK-DKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNAR 447
D GK + D+ A+ + + +++D ++KE D + E + + E D
Sbjct: 450 DTGKTETDVKAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEE 509
Query: 448 KTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFLEAQEI 576
KT+ K++ + V D+ E+P +EK ++++++
Sbjct: 510 KTDSKETADKVEQTDSKDTNEKPAKDDNKEANEKAEKVDSKDV 552
Score = 25.8 bits (54), Expect = 5.7
Identities = 25/125 (20%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Frame = +1
Query: 235 AEMDKLSEMILVDEGKDKDLAAELDNY--LYEDNRDPDQENK----EEIDSGDGFEDNIE 396
+++ +E+ E K+ D A L+ + E+ D+ NK ++++ D N +
Sbjct: 391 SDVSDTAEISEKTEAKNADSEANLEEKSDVGEEKESKDENNKASLHKDVEEKDTKITNED 450
Query: 397 TIDSAEDAKNSQQDNAR------KTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIF 558
T + D K + D+ KT+ K++++ V + ++ + K I D+K+
Sbjct: 451 TGKTETDVKAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEK 510
Query: 559 LEAQE 573
+++E
Sbjct: 511 TDSKE 515
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 31.1 bits (67), Expect = 0.15
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 322 EDNRDPDQENKEEIDSGDGFEDNIETID--SAEDAKNSQQDNARKTEDKDSDETVFDVLE 495
E+ D EN + + D F + E +D S ++ +++N + E+ +SDE + E
Sbjct: 128 EEEDSSDLEN-DFLYGADEFSSDEEEMDDISVTSSEEEEEENGARIEELNSDEEDAEQAE 186
Query: 496 PDSKEEPKLPPPIVEDEKKIFLEAQE 573
+ E+P + E K L+ +E
Sbjct: 187 EEILEKPVPKDEVAEKHSKDKLKKEE 212
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 30.7 bits (66), Expect = 0.20
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 340 DQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDE 474
DQ++ D+ DG +D+I + +D +S ++ + ED D +E
Sbjct: 210 DQDDHVYDDTNDGTDDDINNNEYKDDESSSGSESYERDEDVDEEE 254
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 30.7 bits (66), Expect = 0.20
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +1
Query: 238 EMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNIETIDSAED 417
E ++I +DE +D D E + EDN E++ + + + E++ T ++ E+
Sbjct: 1921 EASSHGDVISIDE-EDLDNQGEEFEWEDEDNASSGYEDELDYNEDEVGENDSTTFEAMEN 1979
Query: 418 AKNSQQDNARKTEDKDSDETV-FDVLEPD 501
A DN E+ D V D LE D
Sbjct: 1980 AFTETSDNDDHLEEADHVSPVEIDFLEND 2008
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 30.3 bits (65), Expect = 0.26
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 223 KSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNIETI 402
+S +E + SE V+ K K +AA D+ + D E+ EE + + ED+ E
Sbjct: 52 ESESSEEESESEESEVEVPKKKAVAASEDS-------ESDSESSEEEEETESEEDS-EVS 103
Query: 403 DSAEDAKNSQQDNARKTE-DKDSDET 477
D +E S+ ++ ++E +++SDE+
Sbjct: 104 DESESESESESESEEESESEEESDES 129
Score = 25.0 bits (52), Expect = 9.9
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 322 EDNRDPDQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNA-RKTEDKDSDETVFDVLEP 498
+D+ ++ ++EE S E + E +S E + A +ED +SD + E
Sbjct: 34 DDSSSEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEE 93
Query: 499 DSKEEPKLPPPIVEDEKKIFLEAQE 573
EE E E + E++E
Sbjct: 94 TESEEDSEVSDESESESESESESEE 118
>SPBC13E7.08c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 30.3 bits (65), Expect = 0.26
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +1
Query: 268 VDEGKDKDL----AAELDNYLYEDNRDPDQENKEEIDSGD---GFE-DNIETIDSAEDAK 423
++E ++ DL A E + E+ ++ D+E++EE+ +G GF+ D ++ A K
Sbjct: 327 LEENEEDDLGDFIAEEEEEEEQEEEQEEDEEDEEEVGAGSDIKGFDADKEASVARATINK 386
Query: 424 NSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKK 552
+ + D ETV + D + ++ IVE + +
Sbjct: 387 YEDDEVIPSAVETDRSETVTETSVGDGSVQRRVKRRIVESDSE 429
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 30.3 bits (65), Expect = 0.26
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +1
Query: 325 DNRDPDQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDKD 465
+N + N ++ + D E+N E D+ E+ + ++D+ ED+D
Sbjct: 82 ENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEEDED 128
Score = 26.2 bits (55), Expect = 4.3
Identities = 19/85 (22%), Positives = 38/85 (44%)
Frame = +1
Query: 268 VDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNAR 447
VD + D + DN E+N + N+EE + + E++ E D + + + + R
Sbjct: 85 VDNVNNNDKKEDEDNV--EENEEEADANEEEEEDEEDDEEDEEDEDESGGGRRKRARHDR 142
Query: 448 KTEDKDSDETVFDVLEPDSKEEPKL 522
+ + D + V + E EE ++
Sbjct: 143 RNQFLDIEAEVDEDEEELEDEEDEI 167
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 29.9 bits (64), Expect = 0.35
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +1
Query: 325 DNRDPDQENKEEIDSGDGFEDNI-----ETIDSAEDAKNSQQDNARKTEDKDSDETVFDV 489
+ + PD+ + + DS + N+ E I SA+DAK +Q A + E+K +
Sbjct: 41 ETQSPDEPSPKTTDSTGARDANLSLKTQEPIVSADDAKGAQGKGADEKEEKK------ET 94
Query: 490 LEPDSKEEPKLPPPIVEDEKKIFLEAQE 573
++P EE K PP + E+K EA+E
Sbjct: 95 IQP--PEEVKTEPP--QPEEKEGKEAKE 118
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.9 bits (64), Expect = 0.35
Identities = 31/119 (26%), Positives = 52/119 (43%)
Frame = +1
Query: 217 EQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNIE 396
+ K A DK S + +DE + E D +DN D + E+++ D E+
Sbjct: 1281 DDKQDTASKDKNS-LETIDEKMEDASKIEGDAKTGDDNEMEDLDKMEDLEKPDYAEEKDP 1339
Query: 397 TIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFLEAQE 573
I + ++ Q+ ++T SDE V LEP ++ + V D+ K+ LE E
Sbjct: 1340 YITVMSELRSRIQNVPKRTVTVYSDEGV-ATLEPGAQGDD------VVDKAKMILEKME 1391
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 29.5 bits (63), Expect = 0.46
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +1
Query: 370 GDGFEDN-IETIDSAEDAKNSQQDNARKT--EDKDSDETVFDVLEPDSKEEPKLPPPIVE 540
G+ +DN ++ E AK Q+ + T ED+ SD +D L S E K+ PI++
Sbjct: 172 GELHDDNETDSFRINELAKQIQETSLGATTQEDESSDGICWDELSTTSPESSKVSEPIIQ 231
Query: 541 D 543
D
Sbjct: 232 D 232
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 29.5 bits (63), Expect = 0.46
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 340 DQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDE 474
D+EN E D+ + E DSA++ S ++ ++ D D D+
Sbjct: 173 DKENLLESDASSSNDSESELTDSADNMNESDSESEIESSDSDHDD 217
>SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 449
Score = 29.1 bits (62), Expect = 0.61
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Frame = +1
Query: 211 KEEQKSLQAEMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDN 390
K +K LQ ++ E+ + GK ++A + N D I+S ++
Sbjct: 50 KTSKKILQLAREQKEELDEEENGKPSQISAFISN-----GHQKDTLENPAIESSYEESEH 104
Query: 391 IETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPD-SKEEPKL 522
+ +E + +++ + E D+D +FD P S EE L
Sbjct: 105 ARNVSDSESITSQEEEEYEELEIDDADRDLFDRFLPTVSGEEGDL 149
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 29.1 bits (62), Expect = 0.61
Identities = 22/99 (22%), Positives = 51/99 (51%)
Frame = +1
Query: 238 EMDKLSEMILVDEGKDKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNIETIDSAED 417
E ++ + DE K+ + E ++ +++ + + + + DSGD E+++E + +
Sbjct: 86 EPQTFADEFIDDEAKECE--GEEEDSVFDSDEEHEVKPMFSDDSGD--EEDLELANM--E 139
Query: 418 AKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPI 534
A + + D + E+K+++E + + P E P + PPI
Sbjct: 140 AMSRKLDEEAELEEKEAEEELHTNIHP---EAPTVLPPI 175
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 29.1 bits (62), Expect = 0.61
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 322 EDNRDPDQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPD 501
E++ D EN ++ + D F D + T S ++ RKTE+ +SD + +
Sbjct: 340 EESEFMDSENVDD-EEDDDFLD-VTTATSLQNKSTDYGSVKRKTENLNSDSDIQNKRTKS 397
Query: 502 SKEEPKLPP 528
+E LPP
Sbjct: 398 IEENNSLPP 406
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 28.7 bits (61), Expect = 0.81
Identities = 18/95 (18%), Positives = 41/95 (43%)
Frame = +1
Query: 280 KDKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTED 459
++ ++ + N+ YE + DP+ E ++ + FE+ + D +D + K
Sbjct: 154 EEDSVSTDFQNHDYEKSSDPETERLNDLREREEFEERLRRKDLEAATNEFVEDYSSKF-- 211
Query: 460 KDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFLE 564
S+E L D + KL + + ++ +L+
Sbjct: 212 -SSEELALRKLADDPESWRKLASELRKKSRQQYLK 245
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +1
Query: 253 SEMILVDEGKDKDLAAELDNYLYEDN---RDPDQENKEEIDSGDGFEDNIETIDSAEDAK 423
S+ I V G+D ++ L +Y +N + D E E + I+ + +K
Sbjct: 467 SDNIFVKPGEDLEIPL-LSDYSDSENISEKSSDDEEAFEKQVTSSYSSPIKVKSQGKSSK 525
Query: 424 NSQQDNARKTEDKDSDETVFDVLEPDS 504
S + R+ E D D VF P+S
Sbjct: 526 GSSGLDVREHEGSDDDAEVFVDRSPES 552
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 394 ETIDSAEDAKN---SQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPI 534
ETID +ED+KN ++ +N + S + FD D+++E K PI
Sbjct: 239 ETIDESEDSKNTLVTEDENDDSVFLESSSDKYFDSSSFDAEQEEKHDFPI 288
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.4
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +1
Query: 241 MDKLSEMILVDEGK----DKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNIETIDS 408
+++LS + +EGK D D+AA+ LYE +DP+ G + +
Sbjct: 197 INQLSRSLFYEEGKEFWDDYDIAAKEILSLYE--QDPEGFVNPYSKRGAA------ALAN 248
Query: 409 AEDAKNSQQDNARKTE---DKDSDETVFDVLEPDSKEE 513
+E+ K S+ + KT D DS V + L+PDS E+
Sbjct: 249 SENNKGSEAGVSAKTNPDMDSDSSAIVNEFLKPDSVED 286
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 EGKDKDLAAELDNYLYEDNRDPDQ-ENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARK 450
E K K A+ N + EDN D + + +++ G DN + +++ ED S +A
Sbjct: 17 EVKKKKRQAKSKNSVAEDNVDRESNDGNNQVNEPTG-NDNTQVVENTEDISASNVVSAEG 75
Query: 451 TEDKDSD 471
E D
Sbjct: 76 AEASTGD 82
>SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 298
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 343 QENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEE 513
+E KEEI ++N + AE+A + T ++ +ET + E D K++
Sbjct: 4 EEQKEEIKDISSKQENSSEVPKAEEAGKVVESQKDTTSEEKKEETT-EKKEDDGKKD 59
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 385 DNIETIDSAEDAKNSQQDN---ARKTEDKDSDETVFDVLEPDSKEEPK 519
+NIET+ S EDA++++ + K ED + + + + P ++P+
Sbjct: 192 ENIETLPSKEDAQHARVAHIPIEEKQEDSEKEGNIKEAFVPPKFDQPE 239
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.5 bits (58), Expect = 1.9
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = +1
Query: 277 GKDKDLAAELDNYLYEDNRDPDQENKEEIDSGD--GFEDNIETIDSAEDAKNSQQDNARK 450
G D+ +AE + +D + Q+ + S D G + T D+AED +NS+ DN +
Sbjct: 76 GSDQQYSAEAEANQEDDLNETSQQAPDP-SSYDIRGQALSSATWDNAEDGENSKNDNYNE 134
Query: 451 TEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKKIFL 561
+ + + E D+ EE P ++ K+F+
Sbjct: 135 NQSALTGSGAMESNE-DNAEETS---PFNREDGKMFI 167
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 403 DSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEE 513
+ AE AK+ +QD +K +D + DE ++ + KE+
Sbjct: 9 EKAEAAKSRKQDEEKKKKDAEEDEKWSKGVKTNKKEQ 45
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 313 YLYEDNRDPDQENK-EEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDK 462
Y +D D EN+ EE DS F+D + E + NS+ +N +D+
Sbjct: 65 YALDDLPQVDVENEDEEEDSITSFQDEDDETSHQELSDNSEMNNRDDADDE 115
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 322 EDNRDPDQENKEEIDSGDGF---EDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVL 492
+D D E E ++ D E+ E+ + +EDA + + ED++S E +D L
Sbjct: 937 DDEGDDSVEEVSEYEASDADPSDEEEEESEEYSEDASEEDGYSESEVEDEESGED-WDEL 995
Query: 493 EPDSKEE 513
E +++E
Sbjct: 996 ERKARQE 1002
>SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 382
Score = 26.6 bits (56), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 421 WHLQQNQWFQCYLQNHHRCQFL 356
WH NQ + CY++N FL
Sbjct: 126 WHFIPNQEYNCYVKNKTELSFL 147
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 346 ENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSD 471
E KE + N+ DSAED ++ DN R + + +++
Sbjct: 504 ERKEGGSNSSSNISNVANFDSAEDDNDNDNDNDRDSNNNNNN 545
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 328 NRDPDQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDKD 465
N + N DS + +DN D+ D+ N+ +N T+D D
Sbjct: 511 NSSSNISNVANFDSAE--DDNDNDNDNDRDSNNNNNNNNTNTDDDD 554
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 346 ENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSD 471
E KE + N+ DSAED ++ DN R + + +++
Sbjct: 504 ERKEGGSNSSSNISNVANFDSAEDDNDNDNDNDRDSNNNNNN 545
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 328 NRDPDQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDKD 465
N + N DS + +DN D+ D+ N+ +N T+D D
Sbjct: 511 NSSSNISNVANFDSAE--DDNDNDNDNDRDSNNNNNNNNTNTDDDD 554
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 409 AEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIVED 543
AE + SQ + A D D+ + + D PKLPPP E+
Sbjct: 250 AERERESQSNYADHDLWADDDQATVNQRKLDYAPAPKLPPPSHEE 294
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 322 EDNRDPDQENKEEIDSGDGFE 384
+D DPDQE + S DG+E
Sbjct: 302 DDGSDPDQETSDTAASDDGWE 322
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 5.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 454 EDKDSDE--TVFDVLEPDSKEEPKLPPPIVEDEKKIFLEAQE 573
+D +SDE + + EP+S+ E + P +DE K E QE
Sbjct: 369 DDAESDEMHSPYSTHEPESEPEDQDEPSEKDDENKDVEEEQE 410
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 25.8 bits (54), Expect = 5.7
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 421 KNSQQDNARK-TEDKDSDETVFDVLEPDSKEEPKLPPPIVEDEKK 552
KN Q+ AR T E+ +PD P LPP EDE K
Sbjct: 147 KNIHQNIARNSTVPNPVQESNSSSSQPDPLSFPYLPPTPAEDEHK 191
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 283 DKDLAAELDNYLYEDNRDPDQENKEEIDSGDGFEDNIETIDSAEDAKN 426
D + +L+ E N ++E KE D D ED+ +T + + +KN
Sbjct: 167 DDIMKRKLETEKLEANNKEEKEEKEGKDDKDDKEDSNDTKNDKKISKN 214
>SPBC18H10.09 |||zinc finger protein, zf-CHY
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +1
Query: 373 DGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETVFDVLEPDSKEEPKLPPPIV 537
DG ED+++ ++ +DA ++ D K + +E + P L PI+
Sbjct: 127 DGKEDDLQNVNEPQDAYSNDHDIQSKDTELLGNEYCLEWKNPHLTNVGTLKAPIL 181
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 340 DQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDE 474
D E KEE ++ NIE S+ + K+ RK +D D D+
Sbjct: 302 DGEVKEEEENKVSSSSNIEASQSSLEVKDEAN---RKVDDDDEDD 343
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 363 NFFFIFLIRVSIVFVQII 310
+ F+ FL+ VS +FVQ+I
Sbjct: 349 SIFYFFLLNVSYMFVQVI 366
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 30 HASAHHKTNSKHSIICFKSAQNEV 101
H S HH ++S HS +C + N++
Sbjct: 479 HGSHHHHSHSNHS-MCLPNTTNDI 501
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/80 (18%), Positives = 37/80 (46%)
Frame = +1
Query: 301 ELDNYLYEDNRDPDQENKEEIDSGDGFEDNIETIDSAEDAKNSQQDNARKTEDKDSDETV 480
++ +Y+ D+ QE+ +E+N + D+ + ++D+ ED++ E
Sbjct: 326 QITHYISLDDNLDVQESLGIFHYDPDYEENEKKYDAIKHEILGEEDDDENEEDEEDSEET 385
Query: 481 FDVLEPDSKEEPKLPPPIVE 540
+ E +S + K P +++
Sbjct: 386 SESEEDESVNDEK--PQVID 403
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.133 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,835,367
Number of Sequences: 5004
Number of extensions: 32357
Number of successful extensions: 180
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -