Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12c10
         (674 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58737-2|AAM69081.1|  479|Caenorhabditis elegans Hypothetical pr...    36   0.020
U58737-1|ABC48238.1|  474|Caenorhabditis elegans Hypothetical pr...    36   0.020
Z22177-5|CAA80150.1|  576|Caenorhabditis elegans Hypothetical pr...    33   0.19 
U58737-3|AAM69082.2|  189|Caenorhabditis elegans Hypothetical pr...    33   0.19 
AF095787-1|AAC64972.1|  563|Caenorhabditis elegans EAT-4 protein.      33   0.19 
Z19153-2|CAA79549.1|  493|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z95559-7|CAB76730.2|  329|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z82285-3|CAD56246.1|  573|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z74030-19|CAA98449.2|  841|Caenorhabditis elegans Hypothetical p...    29   4.0  
Z72508-10|CAA96644.2|  841|Caenorhabditis elegans Hypothetical p...    29   4.0  
AC006675-3|AAK84550.1|  335|Caenorhabditis elegans Serpentine re...    28   7.0  
Z75537-5|CAA99837.3|  335|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>U58737-2|AAM69081.1|  479|Caenorhabditis elegans Hypothetical
           protein ZK54.1a protein.
          Length = 479

 Score = 36.3 bits (80), Expect = 0.020
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = +2

Query: 68  VNHLDLSPHFAGVMLSITNFAGSIGSILTPVGTSLILRNDSV 193
           VNHLDL+P +AG +++ +N   +I  I  P+    I++N ++
Sbjct: 394 VNHLDLAPQYAGHLMATSNTFATIPGIFGPLLVGAIVQNGTI 435


>U58737-1|ABC48238.1|  474|Caenorhabditis elegans Hypothetical
           protein ZK54.1b protein.
          Length = 474

 Score = 36.3 bits (80), Expect = 0.020
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = +2

Query: 68  VNHLDLSPHFAGVMLSITNFAGSIGSILTPVGTSLILRNDSV 193
           VNHLDL+P +AG +++ +N   +I  I  P+    I++N ++
Sbjct: 389 VNHLDLAPQYAGHLMATSNTFATIPGIFGPLLVGAIVQNGTI 430


>Z22177-5|CAA80150.1|  576|Caenorhabditis elegans Hypothetical
           protein ZK512.6 protein.
          Length = 576

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 68  VNHLDLSPHFAGVMLSITNFAGSIGSILTPVGT 166
           VNHLD++P +A +++  +N  G++  +  P  T
Sbjct: 427 VNHLDIAPRYAAILMGFSNGIGTLAGLTCPFVT 459


>U58737-3|AAM69082.2|  189|Caenorhabditis elegans Hypothetical
           protein ZK54.3 protein.
          Length = 189

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 13/42 (30%), Positives = 28/42 (66%)
 Frame = +2

Query: 68  VNHLDLSPHFAGVMLSITNFAGSIGSILTPVGTSLILRNDSV 193
           VNHLDL+P +AG ++++++   +I +I  P     I+++ ++
Sbjct: 108 VNHLDLAPQYAGHLIALSHTLATIPAIFGPSLIKAIVKHGTI 149


>AF095787-1|AAC64972.1|  563|Caenorhabditis elegans EAT-4 protein.
          Length = 563

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 68  VNHLDLSPHFAGVMLSITNFAGSIGSILTPVGT 166
           VNHLD++P +A +++  +N  G++  +  P  T
Sbjct: 414 VNHLDIAPRYAAILMGFSNGIGTLAGLTCPFVT 446


>Z19153-2|CAA79549.1|  493|Caenorhabditis elegans Hypothetical
           protein C38C10.2 protein.
          Length = 493

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = +2

Query: 68  VNHLDLSPHFAGVMLSITNFAGSIGSILTPVGTSLILRN 184
           VN+L+++P F+G ++   N   ++  I++P  +S +  N
Sbjct: 395 VNYLEIAPPFSGTVMGTGNTISALAGIISPAVSSYLTPN 433


>Z95559-7|CAB76730.2|  329|Caenorhabditis elegans Hypothetical
           protein Y41E3.14 protein.
          Length = 329

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 387 PITILKFTSKMLSYKCYKL*VLRIVTNYTETL 482
           PI  + F +K++ Y CYKL V   +T+ + T+
Sbjct: 53  PILYIIFKTKLIRYACYKLIVFLTLTDMSATV 84


>Z82285-3|CAD56246.1|  573|Caenorhabditis elegans Hypothetical
           protein T28F3.4a protein.
          Length = 573

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 77  LDLSPHFAGVMLSITNFAGSIGSILTPVGTSLILRNDSVS 196
           L L+P +   M SI+ F   +G + TP    LI + +++S
Sbjct: 432 LSLAPKYTATMSSISVFCAMMGRLATPAIVGLIKKQNTLS 471


>Z74030-19|CAA98449.2|  841|Caenorhabditis elegans Hypothetical
           protein F28H7.10a protein.
          Length = 841

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
 Frame = -1

Query: 659 CKIIIYIFLVF--CLNLWSIRIFLLLRWVDELTACLPSVSWLLEPIDFYNVNVPPTLRYK 486
           C+I+  I ++F   L+   IR     +W + L A  P+         F  +++P  L   
Sbjct: 507 CEIMTIIVMLFQILLDFGDIRRIGFQKWFNFLKA-FPAKLMFKGAFLFIIISIPCRLACS 565

Query: 485 F*GLSIVSYNSQHL*LIALITQHFTSKF*YSYWLLVPICRPENVLLASKFIKQYAYIYII 306
           F    +   N+  +  I L+TQHF   +  +   + P       ++A+  ++ +A IY I
Sbjct: 566 FHEFFLTIDNTMAIISILLVTQHFL-YYMRAIPFVGPFVLMVYTIIATDLVR-FAMIYSI 623

Query: 305 FRV 297
           F V
Sbjct: 624 FLV 626


>Z72508-10|CAA96644.2|  841|Caenorhabditis elegans Hypothetical
           protein F28H7.10a protein.
          Length = 841

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
 Frame = -1

Query: 659 CKIIIYIFLVF--CLNLWSIRIFLLLRWVDELTACLPSVSWLLEPIDFYNVNVPPTLRYK 486
           C+I+  I ++F   L+   IR     +W + L A  P+         F  +++P  L   
Sbjct: 507 CEIMTIIVMLFQILLDFGDIRRIGFQKWFNFLKA-FPAKLMFKGAFLFIIISIPCRLACS 565

Query: 485 F*GLSIVSYNSQHL*LIALITQHFTSKF*YSYWLLVPICRPENVLLASKFIKQYAYIYII 306
           F    +   N+  +  I L+TQHF   +  +   + P       ++A+  ++ +A IY I
Sbjct: 566 FHEFFLTIDNTMAIISILLVTQHFL-YYMRAIPFVGPFVLMVYTIIATDLVR-FAMIYSI 623

Query: 305 FRV 297
           F V
Sbjct: 624 FLV 626


>AC006675-3|AAK84550.1|  335|Caenorhabditis elegans Serpentine
           receptor, class h protein35 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = -1

Query: 650 IIYIFLVFCLNLWSIRIFLLLRWVDELTACLPSVSWLLEPIDFYNVNVPPTL 495
           II+ F  +C+   S + F +L+W+     C  +  WL        +N  PT+
Sbjct: 28  IIFPFTHYCVLTKSPKSFGILKWIIYFHCCCVTFEWLNNAFLIDIMNFQPTV 79


>Z75537-5|CAA99837.3|  335|Caenorhabditis elegans Hypothetical
           protein F18E2.4 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +3

Query: 387 PITILKFTSKMLSYKCYKL*VLRIVTNYTETLELISQGGWHIYVVEVY 530
           P   + F +K++   CYK+ V   VT+   TL      GW      VY
Sbjct: 53  PTIYMMFRTKLIHLTCYKIIVCLGVTDMLATLTCSIFSGWLFIKGAVY 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,126,572
Number of Sequences: 27780
Number of extensions: 274894
Number of successful extensions: 599
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)