Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12c10
         (674 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.0  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   2.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.5  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   6.1  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 587 RWVDELTACLPSVSWLLEPIDFYNV 513
           +WV  LT CL   S  + PI  YNV
Sbjct: 295 QWVYPLTGCLYYFSTTINPI-LYNV 318


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 127 EVGYREHHAGKVWRQVQVIY 68
           E  Y+EH  GK+ R++Q  Y
Sbjct: 97  EKRYQEHPNGKILRELQTDY 116


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -3

Query: 198  ILTESLRNIRLVPTGVSILPILPAK 124
            I T+S RNI+++P+G  +L  L ++
Sbjct: 1353 IRTDSTRNIQILPSGELMLSNLQSQ 1377


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -3

Query: 198  ILTESLRNIRLVPTGVSILPILPAK 124
            I T+S RNI+++P+G  +L  L ++
Sbjct: 1349 IRTDSTRNIQILPSGELMLSNLQSQ 1373


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -2

Query: 391 IGYWFQFVGQKMFYWHQSL 335
           + YW + +G  + +WH  L
Sbjct: 196 VAYWREDIGINLHHWHWHL 214


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 595 YYLDGWTSLQLAYL 554
           YYL  WT L LA L
Sbjct: 30  YYLPNWTDLVLAGL 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,724
Number of Sequences: 438
Number of extensions: 3440
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)