Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12b08
(636 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY279382-1|AAP42277.1| 348|Homo sapiens cancer-associated gene ... 156 7e-38
BC009037-1|AAH09037.1| 348|Homo sapiens ATP binding domain 3 pr... 153 5e-37
BC125269-1|AAI25270.1| 515|Homo sapiens hypothetical protein LO... 35 0.21
BC108659-1|AAI08660.1| 515|Homo sapiens hypothetical protein LO... 35 0.21
BC080540-1|AAH80540.1| 507|Homo sapiens LOC348180 protein protein. 35 0.21
BC063512-1|AAH63512.1| 589|Homo sapiens LOC348180 protein protein. 34 0.37
AY358654-1|AAQ89017.1| 772|Homo sapiens CDH19 protein. 30 6.0
AJ007607-1|CAC13126.1| 772|Homo sapiens cadherin-19 protein. 30 6.0
Z32684-1|CAA83632.2| 444|Homo sapiens membrane transport protei... 30 7.9
DQ062746-1|AAY43132.1| 444|Homo sapiens Kell blood group precur... 30 7.9
BC036019-1|AAH36019.1| 444|Homo sapiens X-linked Kx blood group... 30 7.9
AY534238-1|AAT07087.1| 444|Homo sapiens XK-related protein 1 pr... 30 7.9
>AY279382-1|AAP42277.1| 348|Homo sapiens cancer-associated gene
protein protein.
Length = 348
Score = 156 bits (378), Expect = 7e-38
Identities = 82/173 (47%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Frame = +1
Query: 136 MPVPCKRGC-GNNAVLKRPKTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASG 312
MP P C A L+RP +G A+C CF AFE E+ +T+ G+L G VAV ASG
Sbjct: 1 MPAPPCASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASG 60
Query: 313 GKDSTVLAHTLKTLNERYNYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEMPLKILSY 492
GKDSTVLAH L+ L R G++L L+++DEGI GYRD +L V++ +E+PL +++Y
Sbjct: 61 GKDSTVLAHVLRALAPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAY 118
Query: 493 KDLY-GWTMDEI---VAQIGRKNN-CTFCGVFRRQALDRGAAMLNVKCIATGH 636
+DL+ GWTMD + A GR + CTFCGV RR+AL+ GA + I TGH
Sbjct: 119 EDLFGGWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGH 171
>BC009037-1|AAH09037.1| 348|Homo sapiens ATP binding domain 3
protein.
Length = 348
Score = 153 bits (371), Expect = 5e-37
Identities = 81/173 (46%), Positives = 109/173 (63%), Gaps = 6/173 (3%)
Frame = +1
Query: 136 MPVPCKRGC-GNNAVLKRPKTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASG 312
MP P C A L+RP +G A+C CF AFE E+ +T+ G+L G VAV ASG
Sbjct: 1 MPAPPCASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASG 60
Query: 313 GKDSTVLAHTLKTLNERYNYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEMPLKILSY 492
GKDSTVLAH + L R G++L L+++DEGI GYRD +L V++ +E+PL +++Y
Sbjct: 61 GKDSTVLAHVRRALAPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAVRWELPLTVVAY 118
Query: 493 KDLY-GWTMDEI---VAQIGRKNN-CTFCGVFRRQALDRGAAMLNVKCIATGH 636
+DL+ GWTMD + A GR + CTFCGV RR+AL+ GA + I TGH
Sbjct: 119 EDLFGGWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGH 171
>BC125269-1|AAI25270.1| 515|Homo sapiens hypothetical protein
LOC348180 protein.
Length = 515
Score = 35.1 bits (77), Expect = 0.21
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 190 KTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASGG-KDSTVLAHTLKTLNERY 366
+ GDA C++CF + + + K +L G+ V +A SGG S+++ L+ L++
Sbjct: 41 RAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDS 100
Query: 367 NYGLNLM--LLSIDEG 408
L + ++ +DEG
Sbjct: 101 AKRLRFVAGVIFVDEG 116
>BC108659-1|AAI08660.1| 515|Homo sapiens hypothetical protein
LOC348180 protein.
Length = 515
Score = 35.1 bits (77), Expect = 0.21
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 190 KTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASGG-KDSTVLAHTLKTLNERY 366
+ GDA C++CF + + + K +L G+ V +A SGG S+++ L+ L++
Sbjct: 41 RAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDS 100
Query: 367 NYGLNLM--LLSIDEG 408
L + ++ +DEG
Sbjct: 101 AKRLRFVAGVIFVDEG 116
>BC080540-1|AAH80540.1| 507|Homo sapiens LOC348180 protein protein.
Length = 507
Score = 35.1 bits (77), Expect = 0.21
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 190 KTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASGG-KDSTVLAHTLKTLNERY 366
+ GDA C++CF + + + K +L G+ V +A SGG S+++ L+ L++
Sbjct: 33 RAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDS 92
Query: 367 NYGLNLM--LLSIDEG 408
L + ++ +DEG
Sbjct: 93 AKRLRFVAGVIFVDEG 108
>BC063512-1|AAH63512.1| 589|Homo sapiens LOC348180 protein protein.
Length = 589
Score = 34.3 bits (75), Expect = 0.37
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 190 KTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASGGKDST 327
+ GDA C++CF + + + K +L G+ V +A SGG S+
Sbjct: 44 RAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSS 89
>AY358654-1|AAQ89017.1| 772|Homo sapiens CDH19 protein.
Length = 772
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 235 ETEIHYTITKGKLFNKGDSVAVAASGGKDSTVLA-HTLK-TLNERYN 369
++ I Y+IT+ K+FN D+ + S D + A + L T E+YN
Sbjct: 401 KSPIRYSITRSKVFNINDNGTITTSNSLDREISAWYNLSITATEKYN 447
>AJ007607-1|CAC13126.1| 772|Homo sapiens cadherin-19 protein.
Length = 772
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 235 ETEIHYTITKGKLFNKGDSVAVAASGGKDSTVLA-HTLK-TLNERYN 369
++ I Y+IT+ K+FN D+ + S D + A + L T E+YN
Sbjct: 401 KSPIRYSITRSKVFNINDNGTITTSNSLDREISAWYNLSITATEKYN 447
>Z32684-1|CAA83632.2| 444|Homo sapiens membrane transport protein
protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +1
Query: 256 ITKGKLFNKGDSVAVAASGGKDSTVLAHTLKTLNERYNYGLNLML-LSIDEGITGYRDDS 432
IT F++ SV A G L + + + G +L++ +S+ + G +
Sbjct: 130 ITHRSAFSRA-SVIQAFLGSAPQLTLQLYISVMQQDVTVGRSLLMTISLLSIVYGALRCN 188
Query: 433 LETVKQNRDDYEMPLKILSYKDLYGWTMDEIVAQI 537
+ +K D+YE+ +K L+Y ++ W EI ++
Sbjct: 189 ILAIKIKYDEYEVKVKPLAYVCIFLWRSFEIATRV 223
>DQ062746-1|AAY43132.1| 444|Homo sapiens Kell blood group precursor
(McLeod phenotype) protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +1
Query: 256 ITKGKLFNKGDSVAVAASGGKDSTVLAHTLKTLNERYNYGLNLML-LSIDEGITGYRDDS 432
IT F++ SV A G L + + + G +L++ +S+ + G +
Sbjct: 130 ITHRSAFSRA-SVIQAFLGSAPQLTLQLYISVMQQDVTVGRSLLMTISLLSIVYGALRCN 188
Query: 433 LETVKQNRDDYEMPLKILSYKDLYGWTMDEIVAQI 537
+ +K D+YE+ +K L+Y ++ W EI ++
Sbjct: 189 ILAIKIKYDEYEVKVKPLAYVCIFLWRSFEIATRV 223
>BC036019-1|AAH36019.1| 444|Homo sapiens X-linked Kx blood group
(McLeod syndrome) protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +1
Query: 256 ITKGKLFNKGDSVAVAASGGKDSTVLAHTLKTLNERYNYGLNLML-LSIDEGITGYRDDS 432
IT F++ SV A G L + + + G +L++ +S+ + G +
Sbjct: 130 ITHRSAFSRA-SVIQAFLGSAPQLTLQLYISVMQQDVTVGRSLLMTISLLSIVYGALRCN 188
Query: 433 LETVKQNRDDYEMPLKILSYKDLYGWTMDEIVAQI 537
+ +K D+YE+ +K L+Y ++ W EI ++
Sbjct: 189 ILAIKIKYDEYEVKVKPLAYVCIFLWRSFEIATRV 223
>AY534238-1|AAT07087.1| 444|Homo sapiens XK-related protein 1
protein.
Length = 444
Score = 29.9 bits (64), Expect = 7.9
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +1
Query: 256 ITKGKLFNKGDSVAVAASGGKDSTVLAHTLKTLNERYNYGLNLML-LSIDEGITGYRDDS 432
IT F++ SV A G L + + + G +L++ +S+ + G +
Sbjct: 130 ITHRSAFSRA-SVIQAFLGSAPQLTLQLYISVMQQDVTVGRSLLMTISLLSIVYGALRCN 188
Query: 433 LETVKQNRDDYEMPLKILSYKDLYGWTMDEIVAQI 537
+ +K D+YE+ +K L+Y ++ W EI ++
Sbjct: 189 ILAIKIKYDEYEVKVKPLAYVCIFLWRSFEIATRV 223
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,821,695
Number of Sequences: 237096
Number of extensions: 1984593
Number of successful extensions: 7836
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7832
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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