Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12b04
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical pr... 32 0.29
U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical p... 31 0.66
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 30 1.5
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 30 1.5
U88314-6|AAF99886.1| 240|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 29 2.7
AL032647-5|CAA21693.1| 370|Caenorhabditis elegans Hypothetical ... 28 4.6
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 28 6.1
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 28 6.1
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81015-5|CAB02661.1| 342|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 27 8.1
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical
protein F35E8.7 protein.
Length = 288
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 495 KSTTGPLLDISTVAPATLVDELV-SVSTVAVLPSAVTETSAATDLT 361
+ T+GP ST APA + +V T P+AVT T+A T T
Sbjct: 189 RCTSGPTATTSTAAPAAPTTTVAPAVVTTTAAPAAVTTTAAVTTTT 234
>U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical
protein ZK1127.10 protein.
Length = 392
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -3
Query: 468 ISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVSD 307
+S + TL + L ++A LPS +T S + + G+T + R++V + D
Sbjct: 320 LSALKVFTLAESLGGYESLAELPSIMTHASVPAETRIVLGITDNLIRISVGIED 373
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -3
Query: 534 ATTAVVEIAASV-IKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTF 358
+T+ V I S + STT P + T P T S ST + + + ++ T +T+
Sbjct: 255 STSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATS-TSTSTASTTTTTPSTSTHTTTVTY 313
Query: 357 LEGVTSS 337
TSS
Sbjct: 314 STNATSS 320
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -3
Query: 534 ATTAVVEIAASV-IKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTF 358
+T+ V I S + STT P + T P T S ST + + + ++ T +T+
Sbjct: 237 STSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATS-TSTSTASTTTTTPSTSTHTTTVTY 295
Query: 357 LEGVTSS 337
TSS
Sbjct: 296 STNATSS 302
>U88314-6|AAF99886.1| 240|Caenorhabditis elegans Hypothetical
protein C46H11.7 protein.
Length = 240
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -3
Query: 558 PSEGEASFATTAVVEIAAS-VIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTET 382
P +G T V ++AA TT PL+ +T A T D STV SAVT T
Sbjct: 26 PCDGGILVCQTQVCDVAAGQCCPVTTVPLVTSTTAAVVTDSDG----STVTTTASAVTVT 81
Query: 381 SAAT 370
S +T
Sbjct: 82 STST 85
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = -3
Query: 603 TIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAPATLVDELVS 424
TI + S E S + + TTA + S+T P+ +T AP T E S
Sbjct: 813 TITAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAPETTSTEPPS 872
Query: 423 VSTVAVLPSAVT 388
ST V + +T
Sbjct: 873 SSTTPVQTTTIT 884
Score = 28.7 bits (61), Expect = 3.5
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = -3
Query: 603 TIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAPATLVDELVS 424
T + S E S + + TTA + S+T P+ +T AP T E S
Sbjct: 100 TTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAPETTSTEAPS 159
Query: 423 VSTVAVLPSAVTETSAATDLTFLEGVTSS 337
ST V T T+ A + T E +SS
Sbjct: 160 SSTTPV----QTTTTTAPETTSTEPPSSS 184
Score = 27.9 bits (59), Expect = 6.1
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = -3
Query: 603 TIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAPATLVDELVS 424
T + S E S + + TTA + S+T P+ +T AP T E S
Sbjct: 146 TTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAPETTSTEPPS 205
Query: 423 VSTVAVLPSAVTETSAATDLTFLEGVTSS 337
ST V T T+ A + T E +SS
Sbjct: 206 SSTTPV----QTTTTTAPETTSTEPPSSS 230
>AL032647-5|CAA21693.1| 370|Caenorhabditis elegans Hypothetical
protein Y57A10B.6 protein.
Length = 370
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = -3
Query: 438 DELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVSDF 304
D +VSV T+ +L T S TDL F++ S RL +LV DF
Sbjct: 95 DGIVSVHTLKLL----TAVSFFTDLDFVKCSFSILSRLDLLVEDF 135
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 27.9 bits (59), Expect = 6.1
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = -3
Query: 609 IVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAPATLVDEL 430
+V + + T S + AS TT +V V+KSTT ST+ T+
Sbjct: 441 VVIKTSKSVAESTTTSQLKQTVASEKTTFIVSAFEKVLKSTTSTPSPSSTIVTTTIKVPT 500
Query: 429 VSVSTVAVLPSAVTET 382
V+ ST LP T++
Sbjct: 501 VTFST---LPDPTTKS 513
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = -3
Query: 558 PSEGEASFATTAVVEIAA----SVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAV 391
P E + FAT + +++ + STT +T P+T + +T P+
Sbjct: 565 PIEKKQGFATLPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTS 624
Query: 390 TETSAATDLTFLEGVTSS 337
T TS +T T T++
Sbjct: 625 TSTSTSTTTTTTTSTTAT 642
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = -3
Query: 558 PSEGEASFATTAVVEIAA----SVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAV 391
P E + FAT + +++ + STT +T P+T + +T P+
Sbjct: 565 PIEKKQGFATLPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTS 624
Query: 390 TETSAATDLTFLEGVTSS 337
T TS +T T T++
Sbjct: 625 TSTSTSTTTTTTTSTTAT 642
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 272 SETALPASDAEKSETNTVSLWNDDVTPSKN 361
S T LP AE ++ + S W + +PS N
Sbjct: 117 SATGLPTVPAEPNKARSSSYWKTEASPSNN 146
>Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical
protein F22B8.6 protein.
Length = 392
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -3
Query: 468 ISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVSD 307
+S + TL + L ++A LPS +T S + G+T + R++V + D
Sbjct: 320 LSALKVFTLAESLGGCESLAELPSIMTHASVPSATRAELGITDNLIRISVGIED 373
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 272 SETALPASDAEKSETNTVSLWNDDVTPSKN 361
S T LP AE ++ + S W + +PS N
Sbjct: 117 SATGLPTVPAEPNKARSSSYWKTEASPSNN 146
>Z81015-5|CAB02661.1| 342|Caenorhabditis elegans Hypothetical
protein C11E4.7 protein.
Length = 342
Score = 27.5 bits (58), Expect = 8.1
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -3
Query: 573 ETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAPATLV----DELVSVSTVAV 406
E Y + G +S T + A SVI S+ GP + IS ++ TL+ + S+ T+ +
Sbjct: 3 ELYDVKGLGLSSMDTN--IRNAPSVITSSPGPSVSISLISGLTLLPTSCPQCHSLHTLDI 60
Query: 405 --LPSAVTETSAATDLT 361
L S+++ + AT +T
Sbjct: 61 NKLMSSISSLNTATKIT 77
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 272 SETALPASDAEKSETNTVSLWNDDVTPSKN 361
S T LP AE ++ + S W + +PS N
Sbjct: 117 SATGLPTVPAEPNKARSSSYWKTEASPSNN 146
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = -3
Query: 471 DISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVSD 307
++ T P T S +T S TS +TD T E T S T +D
Sbjct: 173 NVLTDIPVTTTTSTTSSTTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTD 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,937,643
Number of Sequences: 27780
Number of extensions: 161197
Number of successful extensions: 661
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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