Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12b03
(605 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ104207-1|AAZ57203.1| 776|Homo sapiens HOOK3-RET fusion protei... 154 2e-37
BC056146-1|AAH56146.1| 718|Homo sapiens hook homolog 3 (Drosoph... 154 2e-37
BC048304-1|AAH48304.1| 597|Homo sapiens HOOK3 protein protein. 154 2e-37
AF241830-1|AAK29204.1| 718|Homo sapiens golgi-associated microt... 154 2e-37
BC107857-1|AAI07858.1| 300|Homo sapiens HOOK1 protein protein. 143 4e-34
BC011621-1|AAH11621.1| 728|Homo sapiens hook homolog 1 (Drosoph... 143 4e-34
AL035416-6|CAI22779.1| 728|Homo sapiens hook homolog 1 (Drosoph... 143 4e-34
AF044923-1|AAC09298.1| 728|Homo sapiens hook1 protein protein. 143 4e-34
BC012443-1|AAH12443.1| 717|Homo sapiens hook homolog 2 (Drosoph... 140 3e-33
AF044924-1|AAC09299.1| 719|Homo sapiens hook2 protein protein. 140 3e-33
AL035416-5|CAI22778.1| 137|Homo sapiens hook homolog 1 (Drosoph... 132 1e-30
BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain cont... 60 6e-09
BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein. 60 6e-09
BC041160-1|AAH41160.1| 501|Homo sapiens CCDC88A protein protein. 60 6e-09
AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein. 60 6e-09
AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein... 60 6e-09
BC060037-1|AAH60037.1| 622|Homo sapiens CCDC88A protein protein. 59 1e-08
D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein prot... 42 0.002
AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein. 42 0.002
>DQ104207-1|AAZ57203.1| 776|Homo sapiens HOOK3-RET fusion protein
protein.
Length = 776
Score = 154 bits (374), Expect = 2e-37
Identities = 70/142 (49%), Positives = 101/142 (71%)
Frame = +2
Query: 179 AVLCDNLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNW 358
A LC++L+ W+QT N+ A +L++GV +A+ L +I P YF +W +IKT+VG+NW
Sbjct: 10 AELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNW 69
Query: 359 RLKVSNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNC 538
RLK+SNLKKIL+G++DY+ +IL + +F PDV I E +D ++L R+LQL+L CAVNC
Sbjct: 70 RLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLIGEHSDAAELGRMLQLILGCAVNC 129
Query: 539 IKKEEYITRIMEMELSCQRSIM 604
+K+EYI IM ME S Q +M
Sbjct: 130 EQKQEYIQAIMMMEESVQHVVM 151
>BC056146-1|AAH56146.1| 718|Homo sapiens hook homolog 3
(Drosophila) protein.
Length = 718
Score = 154 bits (374), Expect = 2e-37
Identities = 70/142 (49%), Positives = 101/142 (71%)
Frame = +2
Query: 179 AVLCDNLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNW 358
A LC++L+ W+QT N+ A +L++GV +A+ L +I P YF +W +IKT+VG+NW
Sbjct: 10 AELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNW 69
Query: 359 RLKVSNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNC 538
RLK+SNLKKIL+G++DY+ +IL + +F PDV I E +D ++L R+LQL+L CAVNC
Sbjct: 70 RLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLIGEHSDAAELGRMLQLILGCAVNC 129
Query: 539 IKKEEYITRIMEMELSCQRSIM 604
+K+EYI IM ME S Q +M
Sbjct: 130 EQKQEYIQAIMMMEESVQHVVM 151
>BC048304-1|AAH48304.1| 597|Homo sapiens HOOK3 protein protein.
Length = 597
Score = 154 bits (374), Expect = 2e-37
Identities = 70/142 (49%), Positives = 101/142 (71%)
Frame = +2
Query: 179 AVLCDNLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNW 358
A LC++L+ W+QT N+ A +L++GV +A+ L +I P YF +W +IKT+VG+NW
Sbjct: 10 AELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNW 69
Query: 359 RLKVSNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNC 538
RLK+SNLKKIL+G++DY+ +IL + +F PDV I E +D ++L R+LQL+L CAVNC
Sbjct: 70 RLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLIGEHSDAAELGRMLQLILGCAVNC 129
Query: 539 IKKEEYITRIMEMELSCQRSIM 604
+K+EYI IM ME S Q +M
Sbjct: 130 EQKQEYIQAIMMMEESVQHVVM 151
>AF241830-1|AAK29204.1| 718|Homo sapiens golgi-associated
microtubule-binding protein HOOK3 protein.
Length = 718
Score = 154 bits (374), Expect = 2e-37
Identities = 70/142 (49%), Positives = 101/142 (71%)
Frame = +2
Query: 179 AVLCDNLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNW 358
A LC++L+ W+QT N+ A +L++GV +A+ L +I P YF +W +IKT+VG+NW
Sbjct: 10 AELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNW 69
Query: 359 RLKVSNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNC 538
RLK+SNLKKIL+G++DY+ +IL + +F PDV I E +D ++L R+LQL+L CAVNC
Sbjct: 70 RLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLIGEHSDAAELGRMLQLILGCAVNC 129
Query: 539 IKKEEYITRIMEMELSCQRSIM 604
+K+EYI IM ME S Q +M
Sbjct: 130 EQKQEYIQAIMMMEESVQHVVM 151
>BC107857-1|AAI07858.1| 300|Homo sapiens HOOK1 protein protein.
Length = 300
Score = 143 bits (347), Expect = 4e-34
Identities = 65/140 (46%), Positives = 95/140 (67%)
Frame = +2
Query: 185 LCDNLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNWRL 364
LCD+L+ WLQT N + + +L+ GVA+A+ L QI +F SW ++IK DVG+NWR+
Sbjct: 14 LCDSLMIWLQTFNTASPCQDVKQLTSGVAMAQVLHQIDAAWFNESWLSRIKEDVGDNWRI 73
Query: 365 KVSNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNCIK 544
K SN+KK+L+G++ Y+ + L + E PD+ I E +DP +L RLLQL+L CA+NC K
Sbjct: 74 KASNVKKVLQGIMSYYHEFLGQQISEALIPDLNQITECSDPVELGRLLQLILGCAINCEK 133
Query: 545 KEEYITRIMEMELSCQRSIM 604
K+E+I IM +E S Q +M
Sbjct: 134 KQEHIQNIMTLEESVQHVVM 153
>BC011621-1|AAH11621.1| 728|Homo sapiens hook homolog 1
(Drosophila) protein.
Length = 728
Score = 143 bits (347), Expect = 4e-34
Identities = 65/140 (46%), Positives = 95/140 (67%)
Frame = +2
Query: 185 LCDNLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNWRL 364
LCD+L+ WLQT N + + +L+ GVA+A+ L QI +F SW ++IK DVG+NWR+
Sbjct: 14 LCDSLMIWLQTFNTASPCQDVKQLTSGVAMAQVLHQIDAAWFNESWLSRIKEDVGDNWRI 73
Query: 365 KVSNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNCIK 544
K SN+KK+L+G++ Y+ + L + E PD+ I E +DP +L RLLQL+L CA+NC K
Sbjct: 74 KASNVKKVLQGIMSYYHEFLGQQISEALIPDLNQITECSDPVELGRLLQLILGCAINCEK 133
Query: 545 KEEYITRIMEMELSCQRSIM 604
K+E+I IM +E S Q +M
Sbjct: 134 KQEHIQNIMTLEESVQHVVM 153
>AL035416-6|CAI22779.1| 728|Homo sapiens hook homolog 1
(Drosophila) protein.
Length = 728
Score = 143 bits (347), Expect = 4e-34
Identities = 65/140 (46%), Positives = 95/140 (67%)
Frame = +2
Query: 185 LCDNLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNWRL 364
LCD+L+ WLQT N + + +L+ GVA+A+ L QI +F SW ++IK DVG+NWR+
Sbjct: 14 LCDSLMIWLQTFNTASPCQDVKQLTSGVAMAQVLHQIDAAWFNESWLSRIKEDVGDNWRI 73
Query: 365 KVSNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNCIK 544
K SN+KK+L+G++ Y+ + L + E PD+ I E +DP +L RLLQL+L CA+NC K
Sbjct: 74 KASNVKKVLQGIMSYYHEFLGQQISEALIPDLNQITECSDPVELGRLLQLILGCAINCEK 133
Query: 545 KEEYITRIMEMELSCQRSIM 604
K+E+I IM +E S Q +M
Sbjct: 134 KQEHIQNIMTLEESVQHVVM 153
>AF044923-1|AAC09298.1| 728|Homo sapiens hook1 protein protein.
Length = 728
Score = 143 bits (347), Expect = 4e-34
Identities = 65/140 (46%), Positives = 95/140 (67%)
Frame = +2
Query: 185 LCDNLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNWRL 364
LCD+L+ WLQT N + + +L+ GVA+A+ L QI +F SW ++IK DVG+NWR+
Sbjct: 14 LCDSLMIWLQTFNTASPCQDVKQLTSGVAMAQVLHQIDAAWFNESWLSRIKEDVGDNWRI 73
Query: 365 KVSNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNCIK 544
K SN+KK+L+G++ Y+ + L + E PD+ I E +DP +L RLLQL+L CA+NC K
Sbjct: 74 KASNVKKVLQGIMSYYHEFLGQQISEALIPDLNQITECSDPVELGRLLQLILGCAINCEK 133
Query: 545 KEEYITRIMEMELSCQRSIM 604
K+E+I IM +E S Q +M
Sbjct: 134 KQEHIQNIMTLEESVQHVVM 153
>BC012443-1|AAH12443.1| 717|Homo sapiens hook homolog 2
(Drosophila) protein.
Length = 717
Score = 140 bits (340), Expect = 3e-33
Identities = 67/147 (45%), Positives = 96/147 (65%)
Frame = +2
Query: 164 MEGNGAVLCDNLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTD 343
M + A LC +L+ WLQT ++ + +P +LS G+A+A L QI P +F +W I D
Sbjct: 1 MSVDKAELCGSLLTWLQTFHVPSPCASPQDLSSGLAVAYVLNQIDPSWFNEAWLQGISED 60
Query: 344 VGNNWRLKVSNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLS 523
G NW+LKVSNLK +L +V+Y QD+L + E PDV I E +DP++L +LLQLVL
Sbjct: 61 PGPNWKLKVSNLKMVLRSLVEYSQDVLAHPVSEEHLPDVSLIGEFSDPAELGKLLQLVLG 120
Query: 524 CAVNCIKKEEYITRIMEMELSCQRSIM 604
CA++C KK+++I RIM +E S Q +M
Sbjct: 121 CAISCEKKQDHIQRIMTLEESVQHVVM 147
>AF044924-1|AAC09299.1| 719|Homo sapiens hook2 protein protein.
Length = 719
Score = 140 bits (340), Expect = 3e-33
Identities = 67/147 (45%), Positives = 96/147 (65%)
Frame = +2
Query: 164 MEGNGAVLCDNLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTD 343
M + A LC +L+ WLQT ++ + +P +LS G+A+A L QI P +F +W I D
Sbjct: 1 MSVDKAELCGSLLTWLQTFHVPSPCASPQDLSSGLAVAYVLNQIDPSWFNEAWLQGISED 60
Query: 344 VGNNWRLKVSNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLS 523
G NW+LKVSNLK +L +V+Y QD+L + E PDV I E +DP++L +LLQLVL
Sbjct: 61 PGPNWKLKVSNLKMVLRSLVEYSQDVLAHPVSEEHLPDVSLIGEFSDPAELGKLLQLVLG 120
Query: 524 CAVNCIKKEEYITRIMEMELSCQRSIM 604
CA++C KK+++I RIM +E S Q +M
Sbjct: 121 CAISCEKKQDHIQRIMTLEESVQHVVM 147
>AL035416-5|CAI22778.1| 137|Homo sapiens hook homolog 1
(Drosophila) protein.
Length = 137
Score = 132 bits (318), Expect = 1e-30
Identities = 58/124 (46%), Positives = 86/124 (69%)
Frame = +2
Query: 185 LCDNLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNWRL 364
LCD+L+ WLQT N + + +L+ GVA+A+ L QI +F SW ++IK DVG+NWR+
Sbjct: 14 LCDSLMIWLQTFNTASPCQDVKQLTSGVAMAQVLHQIDAAWFNESWLSRIKEDVGDNWRI 73
Query: 365 KVSNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNCIK 544
K SN+KK+L+G++ Y+ + L + E PD+ I E +DP +L RLLQL+L CA+NC K
Sbjct: 74 KASNVKKVLQGIMSYYHEFLGQQISEALIPDLNQITECSDPVELGRLLQLILGCAINCEK 133
Query: 545 KEEY 556
K+E+
Sbjct: 134 KQEH 137
>BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain
containing 88A protein.
Length = 1843
Score = 60.1 bits (139), Expect = 6e-09
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Frame = +2
Query: 197 LINWLQTLN-LKAKHGNPME----LSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNWR 361
L+ W++T L A +G ++ L DGV + + + QI P+ + N K+ D
Sbjct: 18 LVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKLESQRVNKKVNNDAS---- 73
Query: 362 LKVSNLKKILEGVVDYHQDILN-LSLQEFPRPDVV--NIAETADPSDLRRLLQLVLSCAV 532
L++ NL ++ + Y+Q+ L L + P ++ N ++++LL L+L CAV
Sbjct: 74 LRMHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEEVKKLLLLLLGCAV 133
Query: 533 NCIKKEEYITRIMEMELSCQRSI 601
C KKEE+I RI ++ + ++
Sbjct: 134 QCQKKEEFIERIQGLDFDTKAAV 156
>BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein.
Length = 887
Score = 60.1 bits (139), Expect = 6e-09
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Frame = +2
Query: 197 LINWLQTLN-LKAKHGNPME----LSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNWR 361
L+ W++T L A +G ++ L DGV + + + QI P+ + N K+ D
Sbjct: 15 LVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKLESQRVNKKVNNDAS---- 70
Query: 362 LKVSNLKKILEGVVDYHQDILN-LSLQEFPRPDVV--NIAETADPSDLRRLLQLVLSCAV 532
L++ NL ++ + Y+Q+ L L + P ++ N ++++LL L+L CAV
Sbjct: 71 LRMHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEEVKKLLLLLLGCAV 130
Query: 533 NCIKKEEYITRIMEMELSCQRSI 601
C KKEE+I RI ++ + ++
Sbjct: 131 QCQKKEEFIERIQGLDFDTKAAV 153
>BC041160-1|AAH41160.1| 501|Homo sapiens CCDC88A protein protein.
Length = 501
Score = 60.1 bits (139), Expect = 6e-09
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Frame = +2
Query: 197 LINWLQTLN-LKAKHGNPME----LSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNWR 361
L+ W++T L A +G ++ L DGV + + + QI P+ + N K+ D
Sbjct: 18 LVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKLESQRVNKKVNNDAS---- 73
Query: 362 LKVSNLKKILEGVVDYHQDILN-LSLQEFPRPDVV--NIAETADPSDLRRLLQLVLSCAV 532
L++ NL ++ + Y+Q+ L L + P ++ N ++++LL L+L CAV
Sbjct: 74 LRMHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEEVKKLLLLLLGCAV 133
Query: 533 NCIKKEEYITRIMEMELSCQRSI 601
C KKEE+I RI ++ + ++
Sbjct: 134 QCQKKEEFIERIQGLDFDTKAAV 156
>AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein.
Length = 1870
Score = 60.1 bits (139), Expect = 6e-09
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Frame = +2
Query: 197 LINWLQTLN-LKAKHGNPME----LSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNWR 361
L+ W++T L A +G ++ L DGV + + + QI P+ + N K+ D
Sbjct: 18 LVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKLESQRVNKKVNNDAS---- 73
Query: 362 LKVSNLKKILEGVVDYHQDILN-LSLQEFPRPDVV--NIAETADPSDLRRLLQLVLSCAV 532
L++ NL ++ + Y+Q+ L L + P ++ N ++++LL L+L CAV
Sbjct: 74 LRMHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEEVKKLLLLLLGCAV 133
Query: 533 NCIKKEEYITRIMEMELSCQRSI 601
C KKEE+I RI ++ + ++
Sbjct: 134 QCQKKEEFIERIQGLDFDTKAAV 156
>AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein
protein.
Length = 1843
Score = 60.1 bits (139), Expect = 6e-09
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Frame = +2
Query: 197 LINWLQTLN-LKAKHGNPME----LSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNWR 361
L+ W++T L A +G ++ L DGV + + + QI P+ + N K+ D
Sbjct: 18 LVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKLESQRVNKKVNNDAS---- 73
Query: 362 LKVSNLKKILEGVVDYHQDILN-LSLQEFPRPDVV--NIAETADPSDLRRLLQLVLSCAV 532
L++ NL ++ + Y+Q+ L L + P ++ N ++++LL L+L CAV
Sbjct: 74 LRMHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEEVKKLLLLLLGCAV 133
Query: 533 NCIKKEEYITRIMEMELSCQRSI 601
C KKEE+I RI ++ + ++
Sbjct: 134 QCQKKEEFIERIQGLDFDTKAAV 156
>BC060037-1|AAH60037.1| 622|Homo sapiens CCDC88A protein protein.
Length = 622
Score = 59.3 bits (137), Expect = 1e-08
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Frame = +2
Query: 197 LINWLQTLN-LKAKHGNPME----LSDGVAIAEALTQIAPEYFTPSWNTKIKTDVGNNWR 361
L+ W++T L A +G ++ L DGV + + + QI P+ + N K+ D
Sbjct: 18 LVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKLESQRVNKKVNNDAS---- 73
Query: 362 LKVSNLKKILEGVVDYHQDILN-LSLQEFPRPDVV--NIAETADPSDLRRLLQLVLSCAV 532
L++ NL ++ + Y+Q+ L L + P ++ N ++++LL L+L CAV
Sbjct: 74 LRMHNLSILVRQMKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEEVKKLLLLLLGCAV 133
Query: 533 NCIKKEEYITRIMEMELSCQRSI 601
C KKEE+I RI ++ + ++
Sbjct: 134 QCQKKEEFIERIQGLDFDTKAAV 156
>D64159-1|BAA21515.1| 709|Homo sapiens hypothetical protein
protein.
Length = 709
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 374 NLKKILEGVVDYHQDILN-LSLQEFPRPDVV--NIAETADPSDLRRLLQLVLSCAVNCIK 544
NL ++ + Y+Q+ L L + P ++ N ++++LL L+L CAV C K
Sbjct: 3 NLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEEVKKLLLLLLGCAVQCQK 62
Query: 545 KEEYITRIMEMELSCQRSI 601
KEE+I RI ++ + ++
Sbjct: 63 KEEFIERIQGLDFDTKAAV 81
>AF112218-1|AAF17206.1| 742|Homo sapiens unknown protein.
Length = 742
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 374 NLKKILEGVVDYHQDILN-LSLQEFPRPDVV--NIAETADPSDLRRLLQLVLSCAVNCIK 544
NL ++ + Y+Q+ L L + P ++ N ++++LL L+L CAV C K
Sbjct: 3 NLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEEVKKLLLLLLGCAVQCQK 62
Query: 545 KEEYITRIMEMELSCQRSI 601
KEE+I RI ++ + ++
Sbjct: 63 KEEFIERIQGLDFDTKAAV 81
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,695,209
Number of Sequences: 237096
Number of extensions: 1634945
Number of successful extensions: 6129
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6129
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -