Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12b03
         (605 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48362-1|AAC47261.1|  679|Drosophila melanogaster hook protein.       161   7e-40
AY069337-1|AAL39482.1|  679|Drosophila melanogaster LD05265p pro...   161   7e-40
AF044925-1|AAC09300.1|  679|Drosophila melanogaster hook protein...   161   7e-40
AE014134-3018|AAF53742.1|  679|Drosophila melanogaster CG10653-P...   161   7e-40
AY051512-1|AAK92936.1|  525|Drosophila melanogaster GH16485p pro...    34   0.13 
AE014296-149|AAF47424.1|  525|Drosophila melanogaster CG12191-PA...    34   0.13 
AY113238-1|AAM29243.1| 1566|Drosophila melanogaster AT11515p pro...    29   4.9  
AE014134-2480|AAF53382.2| 1566|Drosophila melanogaster CG15287-P...    29   4.9  

>U48362-1|AAC47261.1|  679|Drosophila melanogaster hook protein.
          Length = 679

 Score =  161 bits (391), Expect = 7e-40
 Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
 Frame = +2

Query: 194 NLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTD-VGNNWRLKV 370
           +L+ W +TLNL A H +   L+DGVA+A+AL Q APE FT +W +KIK   VG+NWRL++
Sbjct: 11  SLLEWFKTLNLNAPHADAESLADGVALAQALNQFAPESFTDAWLSKIKASAVGSNWRLRM 70

Query: 371 SNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNCIKKE 550
           SNLKK+ + V DY+ D+LN SL +F +PD+  IAE  D  +L RLLQLVL CAVNC +K+
Sbjct: 71  SNLKKVTQSVYDYYSDVLNYSLSDFSKPDLQRIAEKCDLGELERLLQLVLGCAVNCAEKQ 130

Query: 551 EYITRIMEMELSCQRSIM 604
            YIT IM +E   Q +IM
Sbjct: 131 SYITEIMCLEEELQANIM 148


>AY069337-1|AAL39482.1|  679|Drosophila melanogaster LD05265p
           protein.
          Length = 679

 Score =  161 bits (391), Expect = 7e-40
 Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
 Frame = +2

Query: 194 NLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTD-VGNNWRLKV 370
           +L+ W +TLNL A H +   L+DGVA+A+AL Q APE FT +W +KIK   VG+NWRL++
Sbjct: 11  SLLEWFKTLNLNAPHADAESLADGVALAQALNQFAPESFTDAWLSKIKASAVGSNWRLRM 70

Query: 371 SNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNCIKKE 550
           SNLKK+ + V DY+ D+LN SL +F +PD+  IAE  D  +L RLLQLVL CAVNC +K+
Sbjct: 71  SNLKKVTQSVYDYYSDVLNYSLSDFSKPDLQRIAEKCDLGELERLLQLVLGCAVNCAEKQ 130

Query: 551 EYITRIMEMELSCQRSIM 604
            YIT IM +E   Q +IM
Sbjct: 131 SYITEIMCLEEELQANIM 148


>AF044925-1|AAC09300.1|  679|Drosophila melanogaster hook protein
           protein.
          Length = 679

 Score =  161 bits (391), Expect = 7e-40
 Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
 Frame = +2

Query: 194 NLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTD-VGNNWRLKV 370
           +L+ W +TLNL A H +   L+DGVA+A+AL Q APE FT +W +KIK   VG+NWRL++
Sbjct: 11  SLLEWFKTLNLNAPHADAESLADGVALAQALNQFAPESFTDAWLSKIKASAVGSNWRLRM 70

Query: 371 SNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNCIKKE 550
           SNLKK+ + V DY+ D+LN SL +F +PD+  IAE  D  +L RLLQLVL CAVNC +K+
Sbjct: 71  SNLKKVTQSVYDYYSDVLNYSLSDFSKPDLQRIAEKCDLGELERLLQLVLGCAVNCAEKQ 130

Query: 551 EYITRIMEMELSCQRSIM 604
            YIT IM +E   Q +IM
Sbjct: 131 SYITEIMCLEEELQANIM 148


>AE014134-3018|AAF53742.1|  679|Drosophila melanogaster CG10653-PA
           protein.
          Length = 679

 Score =  161 bits (391), Expect = 7e-40
 Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
 Frame = +2

Query: 194 NLINWLQTLNLKAKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIKTD-VGNNWRLKV 370
           +L+ W +TLNL A H +   L+DGVA+A+AL Q APE FT +W +KIK   VG+NWRL++
Sbjct: 11  SLLEWFKTLNLNAPHADAESLADGVALAQALNQFAPESFTDAWLSKIKASAVGSNWRLRM 70

Query: 371 SNLKKILEGVVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNCIKKE 550
           SNLKK+ + V DY+ D+LN SL +F +PD+  IAE  D  +L RLLQLVL CAVNC +K+
Sbjct: 71  SNLKKVTQSVYDYYSDVLNYSLSDFSKPDLQRIAEKCDLGELERLLQLVLGCAVNCAEKQ 130

Query: 551 EYITRIMEMELSCQRSIM 604
            YIT IM +E   Q +IM
Sbjct: 131 SYITEIMCLEEELQANIM 148


>AY051512-1|AAK92936.1|  525|Drosophila melanogaster GH16485p
           protein.
          Length = 525

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
 Frame = +2

Query: 161 TMEGNGAVLCDNLINWLQTLNLK-AKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIK 337
           T++   ++  +  I+ LQ   +   +H    E  D     + LT +    +T     K++
Sbjct: 280 TVQAGSSIHLNCRISLLQDKTVSWVRHNTQDEGKDNGNALDLLT-VGMHTYTGDKRYKME 338

Query: 338 TDVGNNWRLKVSNLKK----ILEGVVDYHQD-ILNLSLQEFPRPDVVNIAETADPSDLRR 502
               NNWRLK++N+KK    I E  +  H   ++ ++L     P V+ + E  DP    +
Sbjct: 339 FQYPNNWRLKITNVKKDDEAIYECQISTHPPRVIQINL-HVNAPKVMIVDEVGDPLQ-EK 396

Query: 503 LLQLVLSCAVNCIKKEEYIT 562
             ++  +  ++C+ +   +T
Sbjct: 397 YYEIDSTLQLSCVVRNVAMT 416


>AE014296-149|AAF47424.1|  525|Drosophila melanogaster CG12191-PA
           protein.
          Length = 525

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
 Frame = +2

Query: 161 TMEGNGAVLCDNLINWLQTLNLK-AKHGNPMELSDGVAIAEALTQIAPEYFTPSWNTKIK 337
           T++   ++  +  I+ LQ   +   +H    E  D     + LT +    +T     K++
Sbjct: 280 TVQAGSSIHLNCRISLLQDKTVSWVRHNTQDEGKDNGNALDLLT-VGMHTYTGDKRYKME 338

Query: 338 TDVGNNWRLKVSNLKK----ILEGVVDYHQD-ILNLSLQEFPRPDVVNIAETADPSDLRR 502
               NNWRLK++N+KK    I E  +  H   ++ ++L     P V+ + E  DP    +
Sbjct: 339 FQYPNNWRLKITNVKKDDEAIYECQISTHPPRVIQINL-HVNAPKVMIVDEVGDPLQ-EK 396

Query: 503 LLQLVLSCAVNCIKKEEYIT 562
             ++  +  ++C+ +   +T
Sbjct: 397 YYEIDSTLQLSCVVRNVAMT 416


>AY113238-1|AAM29243.1| 1566|Drosophila melanogaster AT11515p
           protein.
          Length = 1566

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = +2

Query: 398 VVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNCIKKEEYITRIMEM 577
           V+D  +++   + Q F R      A + D   L  L  +VL C  NC+++ + IT+ +E 
Sbjct: 60  VIDLDKEVAEANYQ-FQRKSRTKKAGSLDMKSLDPL-NIVLQCIQNCVEEFDRITKQIES 117

Query: 578 E 580
           E
Sbjct: 118 E 118


>AE014134-2480|AAF53382.2| 1566|Drosophila melanogaster CG15287-PA
           protein.
          Length = 1566

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = +2

Query: 398 VVDYHQDILNLSLQEFPRPDVVNIAETADPSDLRRLLQLVLSCAVNCIKKEEYITRIMEM 577
           V+D  +++   + Q F R      A + D   L  L  +VL C  NC+++ + IT+ +E 
Sbjct: 60  VIDLDKEVAEANYQ-FQRKSRTKKAGSLDMKSLDPL-NIVLQCIQNCVEEFDRITKQIES 117

Query: 578 E 580
           E
Sbjct: 118 E 118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,341,848
Number of Sequences: 53049
Number of extensions: 509110
Number of successful extensions: 1128
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)