Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12b03
         (605 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.1  
AB264336-1|BAF44091.1|   21|Apis mellifera ecdysone-induced prot...    22   4.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   4.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   5.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   9.4  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 164 MEGNGAVLCDNLINWLQT 217
           ++GN   +C N +NW+ T
Sbjct: 800 IDGNVVFVCHNGMNWMPT 817


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 231 PNMEIQWNSQMEWQ 272
           PN   QWN  + WQ
Sbjct: 97  PNKLQQWNEDLNWQ 110


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 231 PNMEIQWNSQMEWQ 272
           PN   QWN  + WQ
Sbjct: 112 PNKLQQWNEDLNWQ 125


>AB264336-1|BAF44091.1|   21|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 21

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 377 LKKILEGVVDYH 412
           LK IL GVV+YH
Sbjct: 8   LKGILNGVVNYH 19


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 518 KLIVATFLSQTGRLFQQC*LHQVLEILEDSN 426
           KL+  T +   G  FQ+  L Q  E +EDS+
Sbjct: 498 KLVNTTVMRDLGVEFQKIELKQCDEFVEDSD 528


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 481 GCFSNVDYIRSWKFLKTQIQNVLMVINNT 395
           GC   +D +R  K+L+  I   L +I  T
Sbjct: 367 GCDLTIDNLRKAKYLRACITESLRLIPTT 395


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 329 KIKTDVGNNWRLKVSNLKKILEGVVDYHQDILNLSL 436
           KIK +V  + R+  +   + L  + D +Q++LN  L
Sbjct: 356 KIKQNVPQSGRVNNTQRNEYLLALSDRNQNVLNNDL 391


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,999
Number of Sequences: 438
Number of extensions: 3627
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)