Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12a24
         (637 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075443-1|AAL68256.1|  352|Drosophila melanogaster RE04845p pro...    90   3e-18
AE013599-486|AAF59202.1|  352|Drosophila melanogaster CG1941-PA ...    90   3e-18
AY069178-1|AAL39323.1|  352|Drosophila melanogaster GH22719p pro...    84   1e-16
AE013599-487|AAF59201.1|  352|Drosophila melanogaster CG1942-PA ...    84   1e-16
BT022263-1|AAY54679.1|  268|Drosophila melanogaster IP08159p pro...    79   7e-15
AJ249493-1|CAB55773.1|  358|Drosophila melanogaster hypothetical...    29   5.3  
AE013599-488|AAF59200.1|  226|Drosophila melanogaster CG1946-PA ...    29   5.3  
AE014297-1042|AAF54451.1|  334|Drosophila melanogaster CG12947-P...    28   9.2  

>AY075443-1|AAL68256.1|  352|Drosophila melanogaster RE04845p
           protein.
          Length = 352

 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
 Frame = +3

Query: 147 IEWAPLNVPMSRRLQTLAATAWVC--LAXXXXXXXXXXXXXXXXSDYW-WLGILYAAWML 317
           IEWAP  VPM RR QT A    +   +                 S  W  + ++Y  ++ 
Sbjct: 3   IEWAPKGVPMERRRQTFAMAFLILSFMILSFGSYFFVAAVLFYGSLLWRTIMVIYLVYVY 62

Query: 318 NDIDVCHKGGRTIQWVRNWGWW--NYFRDYFPIKLVKTADLEPSKNYLFACYPHGVLSSG 491
            +    H       W  N   W   ++RDYFP++LVKTA+L P+KNY+ A +PHG+L +G
Sbjct: 63  ANHKRTHSIMDGNGWKINRNNWLFRHYRDYFPVQLVKTAELPPNKNYILASFPHGILGTG 122

Query: 492 AYCSFATNALNFHKLFPGLTPHLIVLGGHFLFPFFRDLILSLG 620
              +   +   + +LFP + P +  L  +FL P  R L+ S G
Sbjct: 123 ISINMGLDISKWLQLFPQVRPKVATLDQNFLTPIVRGLLRSWG 165


>AE013599-486|AAF59202.1|  352|Drosophila melanogaster CG1941-PA
           protein.
          Length = 352

 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
 Frame = +3

Query: 147 IEWAPLNVPMSRRLQTLAATAWVC--LAXXXXXXXXXXXXXXXXSDYW-WLGILYAAWML 317
           IEWAP  VPM RR QT A    +   +                 S  W  + ++Y  ++ 
Sbjct: 3   IEWAPKGVPMERRRQTFAMAFLILSFMILSFGSYFFVAAVLFYGSLLWRTIMVIYLVYVY 62

Query: 318 NDIDVCHKGGRTIQWVRNWGWW--NYFRDYFPIKLVKTADLEPSKNYLFACYPHGVLSSG 491
            +    H       W  N   W   ++RDYFP++LVKTA+L P+KNY+ A +PHG+L +G
Sbjct: 63  ANHKRTHSIMDGNGWKINRNNWLFRHYRDYFPVQLVKTAELPPNKNYILASFPHGILGTG 122

Query: 492 AYCSFATNALNFHKLFPGLTPHLIVLGGHFLFPFFRDLILSLG 620
              +   +   + +LFP + P +  L  +FL P  R L+ S G
Sbjct: 123 ISINMGLDISKWLQLFPQVRPKVATLDQNFLTPIVRGLLRSWG 165


>AY069178-1|AAL39323.1|  352|Drosophila melanogaster GH22719p
           protein.
          Length = 352

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
 Frame = +3

Query: 147 IEWAPLNVPMSRRLQTLAATAWVCLAXXXXXXXXXXXXXXXXSDYWWLGILYAAWMLNDI 326
           IEWAPL VP+ RRLQ L    +  +                      +  L   ++   +
Sbjct: 3   IEWAPLRVPLERRLQILVTAFFTSMLLILLSVSFLLVAGSLIYGGLLVRSLMVTYLAY-V 61

Query: 327 DVCHKGGRTIQWVRNWGWW--------NYFRDYFPIKLVKTADLEPSKNYLFACYPHGVL 482
            V HK  +++  V   GW          ++RDYFP++LVKTA+L  +KNY+ A +PHG+L
Sbjct: 62  FVHHKKTQSV--VDGNGWMITRTNLLHRHYRDYFPVELVKTAELPATKNYILASFPHGIL 119

Query: 483 SSGAYCSFATNALNFHKLFPGLTPHLIVLGGHFLFPFFRDLILSLG 620
            +G   +       + +LFP + P L  L  HF  PF R+++   G
Sbjct: 120 GTGIGINMGLEISKWLELFPQVRPKLGTLDQHFHVPFMREVLRCWG 165


>AE013599-487|AAF59201.1|  352|Drosophila melanogaster CG1942-PA
           protein.
          Length = 352

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
 Frame = +3

Query: 147 IEWAPLNVPMSRRLQTLAATAWVCLAXXXXXXXXXXXXXXXXSDYWWLGILYAAWMLNDI 326
           IEWAPL VP+ RRLQ L    +  +                      +  L   ++   +
Sbjct: 3   IEWAPLRVPLERRLQILVTAFFTSMLLILLSVSFLLVAGSLIYGGLLVRSLMVTYLAY-V 61

Query: 327 DVCHKGGRTIQWVRNWGWW--------NYFRDYFPIKLVKTADLEPSKNYLFACYPHGVL 482
            V HK  +++  V   GW          ++RDYFP++LVKTA+L  +KNY+ A +PHG+L
Sbjct: 62  FVHHKKTQSV--VDGNGWMITRTNLLHRHYRDYFPVELVKTAELPATKNYILASFPHGIL 119

Query: 483 SSGAYCSFATNALNFHKLFPGLTPHLIVLGGHFLFPFFRDLILSLG 620
            +G   +       + +LFP + P L  L  HF  PF R+++   G
Sbjct: 120 GTGIGINMGLEISKWLELFPQVRPKLGTLDQHFHVPFMREVLRCWG 165


>BT022263-1|AAY54679.1|  268|Drosophila melanogaster IP08159p
           protein.
          Length = 268

 Score = 78.6 bits (185), Expect = 7e-15
 Identities = 32/76 (42%), Positives = 51/76 (67%)
 Frame = +3

Query: 381 WNYFRDYFPIKLVKTADLEPSKNYLFACYPHGVLSSGAYCSFATNALNFHKLFPGLTPHL 560
           W Y R+YFP++LVKTA+L P++NY+ A +PHG+L +G   + + +  N+  L+P + P +
Sbjct: 3   WRY-RNYFPVELVKTAELPPNRNYIVASFPHGILGTGTCINMSLDIDNWLSLYPHVRPKI 61

Query: 561 IVLGGHFLFPFFRDLI 608
             L  HF  PF RD++
Sbjct: 62  ATLDHHFKTPFLRDIL 77


>AJ249493-1|CAB55773.1|  358|Drosophila melanogaster hypothetical
           protein protein.
          Length = 358

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 172 PCRGVY-RPWPQPPGCAWRCSGKARCCTSSSHCCTLI 279
           PCR  + RP P+P      C G+ R   + S CC  I
Sbjct: 280 PCRHRWPRPQPRPGPPRTNCDGQRRRRANDSRCCVAI 316


>AE013599-488|AAF59200.1|  226|Drosophila melanogaster CG1946-PA
           protein.
          Length = 226

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 522 NFHKLFPGLTPHLIVLGGHFLFPFFRDLI 608
           N+  L+P + P +  L  HF  PF RD++
Sbjct: 7   NWLSLYPHVRPKIATLDHHFKTPFLRDIL 35


>AE014297-1042|AAF54451.1|  334|Drosophila melanogaster CG12947-PA
           protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -3

Query: 383 PPAPISD--PLYCSTTLVAYVNVV*HPSSVQYSKPP 282
           PP PI D  P  C++TL  + NV    + +++ +PP
Sbjct: 272 PPPPIFDLHPKACTSTLDCFPNVCCQEAGLRHCRPP 307


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,928,826
Number of Sequences: 53049
Number of extensions: 718317
Number of successful extensions: 2775
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2775
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)