Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt12a22
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058532-1|AAL13761.1|  294|Drosophila melanogaster LD23816p pro...    30   3.4  
AE014134-367|AAN10452.2|  294|Drosophila melanogaster CG7085-PE,...    30   3.4  
AE014134-366|AAX53593.1|  294|Drosophila melanogaster CG7085-PD,...    30   3.4  
AE014134-365|AAF51284.1|  294|Drosophila melanogaster CG7085-PA,...    30   3.4  
BT030122-1|ABN49261.1|  540|Drosophila melanogaster IP13510p pro...    29   5.9  
AE014134-2225|AAF53207.2|  634|Drosophila melanogaster CG15485-P...    29   5.9  

>AY058532-1|AAL13761.1|  294|Drosophila melanogaster LD23816p
           protein.
          Length = 294

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +1

Query: 502 NKVYFKILNTERNQYLVLGVGTNPNGDHMAFG--VNSV-DSFRAQWYLQPAKYDKRQFVL 672
           N V   +L TE+  +L+  + T+P  D++     V  + DS  ++W   P + DKR   L
Sbjct: 176 NLVEKGVLTTEKQNFLLFDMTTHPLSDNVVKCRLVKKIQDSVLSKWVNDPQRMDKRMLAL 235


>AE014134-367|AAN10452.2|  294|Drosophila melanogaster CG7085-PE,
           isoform E protein.
          Length = 294

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +1

Query: 502 NKVYFKILNTERNQYLVLGVGTNPNGDHMAFG--VNSV-DSFRAQWYLQPAKYDKRQFVL 672
           N V   +L TE+  +L+  + T+P  D++     V  + DS  ++W   P + DKR   L
Sbjct: 176 NLVEKGVLTTEKQNFLLFDMTTHPLSDNVVKCRLVKKIQDSVLSKWVNDPQRMDKRMLAL 235


>AE014134-366|AAX53593.1|  294|Drosophila melanogaster CG7085-PD,
           isoform D protein.
          Length = 294

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +1

Query: 502 NKVYFKILNTERNQYLVLGVGTNPNGDHMAFG--VNSV-DSFRAQWYLQPAKYDKRQFVL 672
           N V   +L TE+  +L+  + T+P  D++     V  + DS  ++W   P + DKR   L
Sbjct: 176 NLVEKGVLTTEKQNFLLFDMTTHPLSDNVVKCRLVKKIQDSVLSKWVNDPQRMDKRMLAL 235


>AE014134-365|AAF51284.1|  294|Drosophila melanogaster CG7085-PA,
           isoform A protein.
          Length = 294

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +1

Query: 502 NKVYFKILNTERNQYLVLGVGTNPNGDHMAFG--VNSV-DSFRAQWYLQPAKYDKRQFVL 672
           N V   +L TE+  +L+  + T+P  D++     V  + DS  ++W   P + DKR   L
Sbjct: 176 NLVEKGVLTTEKQNFLLFDMTTHPLSDNVVKCRLVKKIQDSVLSKWVNDPQRMDKRMLAL 235


>BT030122-1|ABN49261.1|  540|Drosophila melanogaster IP13510p
           protein.
          Length = 540

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = +1

Query: 466 KVSWKFIALWENNKVYFKILNTERNQYLVLGVGTN---PNGDHMAFGVNS 606
           K +W   A   N K  ++ L ++ N+++++GV TN    +GD++A  V +
Sbjct: 395 KTNWWSSASLRNFKERYRCLESQYNKFILMGVQTNGSLTSGDNIADNVGT 444


>AE014134-2225|AAF53207.2|  634|Drosophila melanogaster CG15485-PA
           protein.
          Length = 634

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = +1

Query: 466 KVSWKFIALWENNKVYFKILNTERNQYLVLGVGTN---PNGDHMAFGVNS 606
           K +W   A   N K  ++ L ++ N+++++GV TN    +GD++A  V +
Sbjct: 489 KTNWWSSASLRNFKERYRCLESQYNKFILMGVQTNGSLTSGDNIADNVGT 538


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,567,847
Number of Sequences: 53049
Number of extensions: 570770
Number of successful extensions: 2130
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2126
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)