Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt12a21
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 46 2e-05
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 39 0.003
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 39 0.003
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 38 0.005
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 36 0.022
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 36 0.022
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 36 0.029
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 36 0.029
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 36 0.039
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 36 0.039
Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical pr... 33 0.16
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 33 0.27
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 33 0.27
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical pr... 30 1.5
U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF125956-8|AAD14728.2| 678|Caenorhabditis elegans Hypothetical ... 29 3.4
AF125956-7|AAX55694.1| 657|Caenorhabditis elegans Hypothetical ... 29 3.4
AF003146-2|AAB54201.1| 228|Caenorhabditis elegans Hypothetical ... 29 3.4
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Frame = +2
Query: 407 AFDYLKDVTK-LTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQ 583
AF L++V + L+ ++NN+ K +PT AL + + L +K IE + AF N++++
Sbjct: 102 AFTGLENVMQELSLSENNL--KEVPTSALAGLRVLNILSLKCNKIENITTKAFVNMTSLI 159
Query: 584 EITLRGNQIKILEVNAFADHK-DLAILGLDTNAIVENKQRRV 706
++ L NQI + + FA+ K L L LD N + E + V
Sbjct: 160 DVNLGCNQICSMAADTFANVKMSLQNLILDNNCMTEFPSKAV 201
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +2
Query: 452 NNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITLRGNQIKILEVNA 631
+N M P++A++ +++ L IKY I + F NL+++ ++L GN I ++ A
Sbjct: 189 DNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGA 248
Query: 632 FADHKDLAILGLDTN 676
+ +L L L+ N
Sbjct: 249 LQNTPNLHYLYLNEN 263
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +2
Query: 452 NNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITLRGNQIKILEVNA 631
N ++ + L+ K + LD+ + N + F L ++Q + L N+I + A
Sbjct: 261 NENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGA 320
Query: 632 FADHKDLAILGLDTNAIVENKQR 700
FA L +L L N + E Q+
Sbjct: 321 FAG-TPLLLLWLPNNCLTEVSQQ 342
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Frame = +2
Query: 407 AFDYLKDVTK-LTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQ 583
AF L++V + L+ ++NN+ K +PT AL + + L +K IE + AF N++++
Sbjct: 102 AFTGLENVMQELSLSENNL--KEVPTSALAGLRVLNILSLKCNKIENITTKAFVNMTSLI 159
Query: 584 EITLRGNQIKILEVNAFADHK-DLAILGLDTNAIVENKQRRV 706
++ L NQI + + FA+ K L L LD N + E + V
Sbjct: 160 DVNLGCNQICSMAADTFANVKMSLQNLILDNNCMTEFPSKAV 201
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +2
Query: 452 NNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITLRGNQIKILEVNA 631
+N M P++A++ +++ L IKY I + F NL+++ ++L GN I ++ A
Sbjct: 189 DNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGA 248
Query: 632 FADHKDLAILGLDTN 676
+ +L L L+ N
Sbjct: 249 LQNTPNLHYLYLNEN 263
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +2
Query: 452 NNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITLRGNQIKILEVNA 631
N ++ + L+ K + LD+ + N + F L ++Q + L N+I + A
Sbjct: 261 NENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGA 320
Query: 632 FADHKDLAILGLDTNAIVENKQR 700
FA L +L L N + E Q+
Sbjct: 321 FAG-TPLLLLWLPNNCLTEVSQQ 342
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/102 (22%), Positives = 46/102 (45%)
Frame = +2
Query: 410 FDYLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEI 589
F L + L+ N ++ ++P LK + NLD+ + + A NL ++ +
Sbjct: 137 FAGLSQLQTLSIADNRLS--FLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLGGLETL 194
Query: 590 TLRGNQIKILEVNAFADHKDLAILGLDTNAIVENKQRRVWSI 715
L+ N + LE F K+L L + N I + ++ ++ +
Sbjct: 195 KLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIEEGALYGL 236
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/102 (22%), Positives = 46/102 (45%)
Frame = +2
Query: 410 FDYLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEI 589
F L + L+ N ++ ++P LK + NLD+ + + A NL ++ +
Sbjct: 137 FAGLSQLQTLSIADNRLS--FLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLGGLETL 194
Query: 590 TLRGNQIKILEVNAFADHKDLAILGLDTNAIVENKQRRVWSI 715
L+ N + LE F K+L L + N I + ++ ++ +
Sbjct: 195 KLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIEEGALYGL 236
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2
Query: 500 KSVLNLDIKYGNIEKVGAYAFANLSAVQEITLRGNQIKILEVNAFADHKDLAILGLDTNA 679
K + LD++ IE + AYAF L ++ ++L GN I LE + F L L L N
Sbjct: 280 KKLKELDLRVNLIENITAYAFDGLESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNE 339
Query: 680 I 682
I
Sbjct: 340 I 340
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2
Query: 500 KSVLNLDIKYGNIEKVGAYAFANLSAVQEITLRGNQIKILEVNAFADHKDLAILGLDTNA 679
K + LD++ IE + AYAF L ++ ++L GN I LE + F L L L N
Sbjct: 280 KKLKELDLRVNLIENITAYAFDGLESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNE 339
Query: 680 I 682
I
Sbjct: 340 I 340
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/90 (28%), Positives = 44/90 (48%)
Frame = +2
Query: 419 LKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITLR 598
LK + +L N I+ I + A S++ L + ++ + A + L +Q+++ R
Sbjct: 268 LKQLRQLYLAHNKISN--ISSNAFT-NSSIVVLVLSSNELKTLTAGIISGLPNLQQVSFR 324
Query: 599 GNQIKILEVNAFADHKDLAILGLDTNAIVE 688
NQIK + NAF D L +L L N + E
Sbjct: 325 DNQIKTINRNAFYDAASLVMLDLAKNQLTE 354
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 506 VLNLDIKYGNIEKVGAYAFANLSAV-QEITLRGNQIKILEVNAFADHKDLAILGLDTNAI 682
+ LD+ I+K+ AFA ++ V +E+ L N I+ + A A +L L L N+I
Sbjct: 52 IRRLDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSI 111
Query: 683 VENKQRRVW 709
VE +++ ++
Sbjct: 112 VEIQEQEIF 120
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = +2
Query: 431 TKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITLRGNQI 610
T++ +N I+ IP+ + K K++ LD+ I ++ AF L + + L GN I
Sbjct: 290 TEIRLEQNQISS--IPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNI 347
Query: 611 KILEVNAFADHKDLAILGLDTNAI 682
L+ + F L +L L+ N +
Sbjct: 348 TDLKSDTFEGLGSLQLLLLNANQL 371
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +2
Query: 425 DVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITLRGN 604
D T+L N I IP L S+ LD+ + + + F+NL+ + + + N
Sbjct: 705 DTTELYLDANYINE--IPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYN 762
Query: 605 QIKILEVNAFADHKDLAILGLDTNAI 682
+++ L+ AF L IL L N I
Sbjct: 763 KLRCLQPLAFNGLNALRILSLHGNDI 788
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 509 LNLDIKYGNIEKVGAYAFANLSAVQEITLRGNQIKILEVNAFADHKDLAILGLDTNAI 682
+ LD++ I K+G F++L ++ + L NQI + +F+ L L L N I
Sbjct: 47 IRLDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRI 104
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = +2
Query: 431 TKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITLRGNQI 610
T++ +N I+ IP+ + K K++ LD+ I ++ AF L + + L GN I
Sbjct: 290 TEIRLEQNQISS--IPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNI 347
Query: 611 KILEVNAFADHKDLAILGLDTNAI 682
L+ + F L +L L+ N +
Sbjct: 348 TDLKSDTFEGLGSLQLLLLNANQL 371
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +2
Query: 425 DVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITLRGN 604
D T+L N I IP L S+ LD+ + + + F+NL+ + + + N
Sbjct: 705 DTTELYLDANYINE--IPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYN 762
Query: 605 QIKILEVNAFADHKDLAILGLDTNAI 682
+++ L+ AF L IL L N I
Sbjct: 763 KLRCLQPLAFNGLNALRILSLHGNDI 788
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 509 LNLDIKYGNIEKVGAYAFANLSAVQEITLRGNQIKILEVNAFADHKDLAILGLDTNAI 682
+ LD++ I K+G F++L ++ + L NQI + +F+ L L L N I
Sbjct: 47 IRLDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRI 104
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/67 (29%), Positives = 38/67 (56%)
Frame = +2
Query: 419 LKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITLR 598
+KD+T + ++N + + +PT L+Y K + L++ Y NIE + ANL + + L
Sbjct: 102 MKDLTIIDLSRNQL--REVPTN-LEYAKGSIVLNLSYNNIETIPNSVCANLIDLLFLDLS 158
Query: 599 GNQIKIL 619
N++ +L
Sbjct: 159 NNKLDML 165
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/67 (29%), Positives = 38/67 (56%)
Frame = +2
Query: 419 LKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITLR 598
+KD+T + ++N + + +PT L+Y K + L++ Y NIE + ANL + + L
Sbjct: 102 MKDLTIIDLSRNQL--REVPTN-LEYAKGSIVLNLSYNNIETIPNSVCANLIDLLFLDLS 158
Query: 599 GNQIKIL 619
N++ +L
Sbjct: 159 NNKLDML 165
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/92 (22%), Positives = 42/92 (45%)
Frame = +2
Query: 407 AFDYLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQE 586
A ++ + K+ + N I Y L K + +D+ ++ +G Y F++ S +
Sbjct: 419 AIGKVEQLKKVDLSHNRIAKVY--QYVLNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHS 476
Query: 587 ITLRGNQIKILEVNAFADHKDLAILGLDTNAI 682
+ + N+I +L +AFA L + + N I
Sbjct: 477 LDVSNNEISLLFKDAFARCPKLRKISMKMNKI 508
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/92 (22%), Positives = 42/92 (45%)
Frame = +2
Query: 407 AFDYLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQE 586
A ++ + K+ + N I Y L K + +D+ ++ +G Y F++ S +
Sbjct: 419 AIGKVEQLKKVDLSHNRIAKVY--QYVLNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHS 476
Query: 587 ITLRGNQIKILEVNAFADHKDLAILGLDTNAI 682
+ + N+I +L +AFA L + + N I
Sbjct: 477 LDVSNNEISLLFKDAFARCPKLRKISMKMNKI 508
>Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical
protein T01G9.3 protein.
Length = 603
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/90 (24%), Positives = 44/90 (48%)
Frame = +2
Query: 365 LFAEHVKPEDDTWTAFDYLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEK 544
L+ H A D + + +L NN+ M +PT+ L+ + LD+ + +I++
Sbjct: 213 LYLNHCNLSSIYSLALDRIPQLRQLGIGGNNLKM--VPTKELRSLPQLSVLDLSHNSIQE 270
Query: 545 VGAYAFANLSAVQEITLRGNQIKILEVNAF 634
+ A AF N + + ++ L N + I + + F
Sbjct: 271 ITACAFCNTN-ISKLDLSHNLLGISKDSPF 299
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 515 LDIKYGNIEKVGAYAFANLSAVQEITLRGNQIKILEVNAFADHKDLAILGLDTNAI 682
LD+ NIE F + ++ + L N + IL F + L L L N I
Sbjct: 116 LDLHSNNIEHATMSNFGGMPKLRVLDLSSNHLNILPTGVFTYLRALRSLSLSNNTI 171
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 515 LDIKYGNIEKVGAYAFANLSAVQEITLRGNQIKILEVNAFADHK--DLAILGLDTNAI 682
LD+ + N+ + +A L ++Q + L N+I +L N F + + +L L LD N +
Sbjct: 6 LDLSHNNLSVIPTWALTYLHSLQILHLENNRIDVLRSNTFDETQLNNLQFLYLDNNQL 63
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/91 (25%), Positives = 41/91 (45%)
Frame = +2
Query: 416 YLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITL 595
YL V + ++N I+ Y+P ++ LD+ +I +G F++ + + + L
Sbjct: 145 YLAAVRSVDLSRNLIS--YLPKPTTSAKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKL 202
Query: 596 RGNQIKILEVNAFADHKDLAILGLDTNAIVE 688
N I L +F+ + L L L N I E
Sbjct: 203 ARNHITTLNQFSFSRLRKLESLDLTRNMIRE 233
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/91 (25%), Positives = 41/91 (45%)
Frame = +2
Query: 416 YLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITL 595
YL V + ++N I+ Y+P ++ LD+ +I +G F++ + + + L
Sbjct: 145 YLAAVRSVDLSRNLIS--YLPKPTTSAKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKL 202
Query: 596 RGNQIKILEVNAFADHKDLAILGLDTNAIVE 688
N I L +F+ + L L L N I E
Sbjct: 203 ARNHITTLNQFSFSRLRKLESLDLTRNMIRE 233
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +2
Query: 452 NNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITLRGNQIKILEVNA 631
N+ + PT ++ ++ I ++ V F NLS + + L NQI + A
Sbjct: 88 NSTLQSFSPTAWRHVEATIEHITINGNELKTVPV--FGNLSTLMSMNLNSNQISSIPDKA 145
Query: 632 FADHKDLAILGLDTNAIVE 688
F L L L+ NAI +
Sbjct: 146 FNGLSALTQLRLENNAICD 164
>U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical
protein ZK682.5 protein.
Length = 575
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/76 (19%), Positives = 34/76 (44%)
Frame = +2
Query: 407 AFDYLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQE 586
AF + + KN ++ + + + + ++D++ I+ V FANL A+
Sbjct: 325 AFQRTPQIQAIVLNKNRLSQ--VRADFFEGLNDLYSIDLQGNRIDNVQPLGFANLPAISH 382
Query: 587 ITLRGNQIKILEVNAF 634
+ + N ++ + N F
Sbjct: 383 LDISYNLLQTMPSNVF 398
>U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical
protein K03A1.2b protein.
Length = 584
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 422 KDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAF-ANLSAVQEITLR 598
K V+ L + N I ++I + K ++ L + + ++ V F A + + + L
Sbjct: 204 KFVSILDVSYNEI--RFIDNDVFKPFTNLTKLYLSHNVLQTVKKDVFDAAKNTLHRLDLG 261
Query: 599 GNQIKILEVNAFADHKDLAILGLDTNAI 682
N+IK++ N+F L +L LD N I
Sbjct: 262 YNRIKVVSDNSFDTLSKLKVLSLDGNPI 289
Score = 27.9 bits (59), Expect = 7.8
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 422 KDVTKLT--FTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITL 595
KD +T FTKN I+ K+ K V LD+ Y I + F + + ++ L
Sbjct: 176 KDFEPITAKFTKNKISRLQNDKVLPKFEKFVSILDVSYNEIRFIDNDVFKPFTNLTKLYL 235
Query: 596 RGNQIKILEVNAF-ADHKDLAILGLDTNAI 682
N ++ ++ + F A L L L N I
Sbjct: 236 SHNVLQTVKKDVFDAAKNTLHRLDLGYNRI 265
>U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical
protein K03A1.2a protein.
Length = 586
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 422 KDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAF-ANLSAVQEITLR 598
K V+ L + N I ++I + K ++ L + + ++ V F A + + + L
Sbjct: 204 KFVSILDVSYNEI--RFIDNDVFKPFTNLTKLYLSHNVLQTVKKDVFDAAKNTLHRLDLG 261
Query: 599 GNQIKILEVNAFADHKDLAILGLDTNAI 682
N+IK++ N+F L +L LD N I
Sbjct: 262 YNRIKVVSDNSFDTLSKLKVLSLDGNPI 289
Score = 27.9 bits (59), Expect = 7.8
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 422 KDVTKLT--FTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLSAVQEITL 595
KD +T FTKN I+ K+ K V LD+ Y I + F + + ++ L
Sbjct: 176 KDFEPITAKFTKNKISRLQNDKVLPKFEKFVSILDVSYNEIRFIDNDVFKPFTNLTKLYL 235
Query: 596 RGNQIKILEVNAF-ADHKDLAILGLDTNAI 682
N ++ ++ + F A L L L N I
Sbjct: 236 SHNVLQTVKKDVFDAAKNTLHRLDLGYNRI 265
>AF125956-8|AAD14728.2| 678|Caenorhabditis elegans Hypothetical
protein DC2.7a protein.
Length = 678
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Frame = +2
Query: 389 EDDTWTAFDYLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNL----DIKYGNIEKVGAY 556
E D W FDY K ++ K + YIP + + T+S KY + +G
Sbjct: 285 EADPWFTFDYAK---RIASQKPSARSCYIP-KTMSATESTTTTPPASTEKYQVLGLLGKG 340
Query: 557 AFANLSAVQEITLRGNQIKILEVNAFADHKDLAILGLDTNAIVENK 694
F + ++ +L G + + E+ A +H + L + I+ +
Sbjct: 341 TFGKVLLIELESLPGEAVAMKEIEASGEHVEQITLNVKKEYILTKR 386
>AF125956-7|AAX55694.1| 657|Caenorhabditis elegans Hypothetical
protein DC2.7c protein.
Length = 657
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Frame = +2
Query: 389 EDDTWTAFDYLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNL----DIKYGNIEKVGAY 556
E D W FDY K ++ K + YIP + + T+S KY + +G
Sbjct: 285 EADPWFTFDYAK---RIASQKPSARSCYIP-KTMSATESTTTTPPASTEKYQVLGLLGKG 340
Query: 557 AFANLSAVQEITLRGNQIKILEVNAFADHKDLAILGLDTNAIVENK 694
F + ++ +L G + + E+ A +H + L + I+ +
Sbjct: 341 TFGKVLLIELESLPGEAVAMKEIEASGEHVEQITLNVKKEYILTKR 386
>AF003146-2|AAB54201.1| 228|Caenorhabditis elegans Hypothetical
protein F56F4.4 protein.
Length = 228
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +2
Query: 407 AFDYLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEKVGAYAFANLS--AV 580
+FD + V++L F KNN T++ I TE K + + K I KV + N + AV
Sbjct: 43 SFDLMYSVSQLNFNKNNSTLQ-IYTE----KKPNVGVHFKIQKIGKVYVHHLCNFTDFAV 97
Query: 581 QEITLR-GNQIKILEVNAF 634
+ + N +K+L+++ F
Sbjct: 98 KYLHYNTSNFLKLLQISTF 116
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical
protein C14C10.5 protein.
Length = 1908
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 154 NDSSNFLF-KNNSLESHYNIIALFKFRTRHILRIRYVRQGNTSTRLRGLT 8
N +F+ NN L + + ++ L K + ILR++ R T R R LT
Sbjct: 374 NQVESFMHPSNNGLHTQHIMVLLSKLLSNTILRLKRERSEKTQHRTRTLT 423
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,416,006
Number of Sequences: 27780
Number of extensions: 304517
Number of successful extensions: 790
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -