Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11p08
(338 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016668-1|AAB66092.1| 257|Caenorhabditis elegans Dehydrogenase... 78 1e-15
Z81592-12|CAB04734.1| 260|Caenorhabditis elegans Hypothetical p... 76 6e-15
Z79696-3|CAB01974.1| 260|Caenorhabditis elegans Hypothetical pr... 76 6e-15
AL031633-8|CAA21012.1| 296|Caenorhabditis elegans Hypothetical ... 58 2e-09
AF063007-4|AAC16429.3| 253|Caenorhabditis elegans Hypothetical ... 53 6e-08
U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,... 52 8e-08
AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenase... 49 7e-07
Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical pr... 49 1e-06
Z74030-5|CAA98438.1| 278|Caenorhabditis elegans Hypothetical pr... 48 2e-06
Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical pr... 48 2e-06
Z49969-4|CAA90268.1| 309|Caenorhabditis elegans Hypothetical pr... 48 2e-06
U41277-4|AAA82475.1| 277|Caenorhabditis elegans Hypothetical pr... 48 2e-06
AF022981-7|AAG24204.1| 280|Caenorhabditis elegans Hypothetical ... 48 2e-06
AC024791-25|AAK29888.4| 255|Caenorhabditis elegans Hypothetical... 48 2e-06
Z54269-2|CAA91019.1| 278|Caenorhabditis elegans Hypothetical pr... 47 4e-06
Z66500-3|CAA91310.1| 309|Caenorhabditis elegans Hypothetical pr... 46 7e-06
AC024791-27|AAM43788.1| 254|Caenorhabditis elegans Hypothetical... 44 2e-05
AC006677-5|AAF39950.1| 280|Caenorhabditis elegans Hypothetical ... 44 4e-05
AC006677-6|AAF39953.1| 279|Caenorhabditis elegans Dehydrogenase... 43 5e-05
AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical... 42 9e-05
AF022978-8|AAG24176.1| 279|Caenorhabditis elegans Hypothetical ... 42 9e-05
Z79756-2|CAB02118.1| 313|Caenorhabditis elegans Hypothetical pr... 42 1e-04
AC006629-7|ABF71723.1| 402|Caenorhabditis elegans Hypothetical ... 41 2e-04
Z72508-2|CAA96635.1| 284|Caenorhabditis elegans Hypothetical pr... 38 0.001
Z81463-2|CAB03851.1| 342|Caenorhabditis elegans Hypothetical pr... 38 0.002
U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical pr... 38 0.002
AC006677-7|AAF39944.1| 281|Caenorhabditis elegans Hypothetical ... 38 0.002
U41277-3|AAA82474.1| 154|Caenorhabditis elegans Hypothetical pr... 34 0.030
Z83238-12|CAB05801.1| 279|Caenorhabditis elegans Hypothetical p... 33 0.040
Z81513-14|CAB04187.1| 279|Caenorhabditis elegans Hypothetical p... 33 0.040
Z81457-3|CAB03815.1| 279|Caenorhabditis elegans Hypothetical pr... 31 0.28
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 31 0.28
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 31 0.28
AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical ... 27 2.6
Z93382-3|CAB07613.1| 292|Caenorhabditis elegans Hypothetical pr... 27 4.5
U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical pr... 27 4.5
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 27 4.5
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 27 4.5
AF077546-7|AAC26319.1| 534|Caenorhabditis elegans Hypothetical ... 27 4.5
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 27 4.5
Z69361-1|CAE17943.1| 468|Caenorhabditis elegans Hypothetical pr... 26 6.0
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 23 6.5
AB259784-1|BAF48662.1| 323|Caenorhabditis elegans ROG-1 protein. 26 7.9
>AF016668-1|AAB66092.1| 257|Caenorhabditis elegans Dehydrogenases,
short chain protein13 protein.
Length = 257
Score = 78.2 bits (184), Expect = 1e-15
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSNVPLKRFGRPEEIAGAVAFLASDDASYITGE 180
VN +APGI+ T F+ + + E+ +K LS + +RFG P+E A AVAFL SD+ASYI+GE
Sbjct: 186 VNSIAPGIIQTDFSQVLFSDESEKQKWLSQIAQRRFGDPDECAEAVAFLVSDEASYISGE 245
Query: 181 TVVVAGGAPARL 216
T+ + GG AR+
Sbjct: 246 TIGINGGMHARI 257
>Z81592-12|CAB04734.1| 260|Caenorhabditis elegans Hypothetical
protein F54F3.4 protein.
Length = 260
Score = 76.2 bits (179), Expect = 6e-15
Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSNVP---LKRFGRPEEIAGAVAFLASDDASYI 171
VN +APG++ TK + + + AEK L+++ L R G P++ AG VA+LASDD+SYI
Sbjct: 186 VNGIAPGVIKTKMSQVLWDGGEDAEKELTDIQEIALGRLGVPDDCAGTVAYLASDDSSYI 245
Query: 172 TGETVVVAGGAPARL 216
TGE +++AGG ARL
Sbjct: 246 TGEMIIIAGGVQARL 260
>Z79696-3|CAB01974.1| 260|Caenorhabditis elegans Hypothetical
protein F54F3.4 protein.
Length = 260
Score = 76.2 bits (179), Expect = 6e-15
Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSNVP---LKRFGRPEEIAGAVAFLASDDASYI 171
VN +APG++ TK + + + AEK L+++ L R G P++ AG VA+LASDD+SYI
Sbjct: 186 VNGIAPGVIKTKMSQVLWDGGEDAEKELTDIQEIALGRLGVPDDCAGTVAYLASDDSSYI 245
Query: 172 TGETVVVAGGAPARL 216
TGE +++AGG ARL
Sbjct: 246 TGEMIIIAGGVQARL 260
>AL031633-8|CAA21012.1| 296|Caenorhabditis elegans Hypothetical
protein Y39A1A.11 protein.
Length = 296
Score = 57.6 bits (133), Expect = 2e-09
Identities = 32/67 (47%), Positives = 39/67 (58%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSNVPLKRFGRPEEIAGAVAFLASDDASYITGE 180
VN V PG + T A+ A S+ VP +R G EEIA AV FLASD +SY+TG
Sbjct: 229 VNAVLPGFIRTPMTEAMPPKVLDAMVSM--VPQRRLGETEEIANAVLFLASDMSSYVTGT 286
Query: 181 TVVVAGG 201
T+ V GG
Sbjct: 287 TLEVTGG 293
>AF063007-4|AAC16429.3| 253|Caenorhabditis elegans Hypothetical
protein R119.3 protein.
Length = 253
Score = 52.8 bits (121), Expect = 6e-08
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSL------SNVPLKRFGRPEEIAGAVAFLASDDA 162
VN V G++ A+ + +G E S +PL R GRP ++A V FLAS A
Sbjct: 176 VNSVVSGMIEGDGTGAVWDHASGEEARQIKQHLESMIPLGRLGRPSDVASYVEFLASTKA 235
Query: 163 SYITGETVVVAGGAPARL 216
YITGE +V GG RL
Sbjct: 236 RYITGENCIVGGGVSYRL 253
>U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,
short chain protein25 protein.
Length = 248
Score = 52.4 bits (120), Expect = 8e-08
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSNVPLKRFGRPEEIAGAVAFLASDDASYITGE 180
VN V PG + T A+ + + +P+ R G EEIA +V +LASD +SY+TG
Sbjct: 181 VNAVLPGFIKTPMTEAMPPTVLA--EICKGIPMGRMGEAEEIANSVLYLASDLSSYVTGA 238
Query: 181 TVVVAGG 201
T+ V GG
Sbjct: 239 TLEVTGG 245
>AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenases,
short chain protein15 protein.
Length = 278
Score = 49.2 bits (112), Expect = 7e-07
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN-------VPLKRFGRPEEIAGAVAFLASDD 159
VN V+PG++ T F A+ + +K+ +P R G+PEEIA +AFLA
Sbjct: 187 VNSVSPGLISTNFLGAVGMGDDVVKKTEEYYSTHRDCIPAGRTGKPEEIASLIAFLADRK 246
Query: 160 AS-YITGETVVVAGG 201
+S YI G+++V+ GG
Sbjct: 247 SSAYIIGQSIVIDGG 261
>Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical
protein F25D1.5 protein.
Length = 277
Score = 48.8 bits (111), Expect = 1e-06
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSNV-------PLKRFGRPEEIAGAVAFLASDD 159
VN V+PG V T F A+ E ++K S + P+ G+PEEIA + FLA +
Sbjct: 185 VNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRN 244
Query: 160 -ASYITGETVVVAGGA 204
+SYI G+++V GG+
Sbjct: 245 LSSYIIGQSIVADGGS 260
>Z74030-5|CAA98438.1| 278|Caenorhabditis elegans Hypothetical
protein D1054.8 protein.
Length = 278
Score = 48.0 bits (109), Expect = 2e-06
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN-------VPLKRFGRPEEIAGAVAFLAS-D 156
VN ++PG+V T F SA+ E ++K S VP G+P++IA +AFLA
Sbjct: 187 VNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRK 246
Query: 157 DASYITGETVVVAGGA 204
+SYI G +VV GG+
Sbjct: 247 TSSYIIGHQLVVDGGS 262
>Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical
protein R08H2.1 protein.
Length = 277
Score = 47.6 bits (108), Expect = 2e-06
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN-------VPLKRFGRPEEIAGAVAFLASDD 159
VN V+PG++ T F A+ E ++K + +P+ G+PEEIA + FLA
Sbjct: 185 VNSVSPGVIATGFLGAMGLPETASDKFYNFMGSQKECIPVGHCGKPEEIANIIVFLADRR 244
Query: 160 -ASYITGETVVVAGGA 204
+SYI G+++V GG+
Sbjct: 245 LSSYIIGQSIVADGGS 260
>Z49969-4|CAA90268.1| 309|Caenorhabditis elegans Hypothetical
protein W01C9.4 protein.
Length = 309
Score = 47.6 bits (108), Expect = 2e-06
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +1
Query: 4 NCVAPGIVVTKFASAITNS-EAG--AEKSLSNVPLKRFGRPEEIAGAVAFLASDDASYIT 174
N V+PG + TK A NS E G AEK P R G PEE+A VAF++SD S++
Sbjct: 203 NAVSPGPIPTKGAWGRLNSGEMGDIAEKMKFLNPEGRVGSPEEVANLVAFISSDHMSFLN 262
Query: 175 GETVVVAGG 201
G + + GG
Sbjct: 263 GAIIDLDGG 271
>U41277-4|AAA82475.1| 277|Caenorhabditis elegans Hypothetical
protein C06E4.3 protein.
Length = 277
Score = 47.6 bits (108), Expect = 2e-06
Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 11/78 (14%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITN----------SEAGAEKSLSNVPLKRFGRPEEIAGAVAFLA 150
VN V PG+V T F + T + GA KS +P GRPE IA A+AFLA
Sbjct: 188 VNTVNPGVVATGFHESCTGLSTEESQKFYDKVGANKSA--IPCGFSGRPEHIAKAIAFLA 245
Query: 151 SDDAS-YITGETVVVAGG 201
D+S YI G+ ++ GG
Sbjct: 246 DRDSSEYIIGQNIIADGG 263
>AF022981-7|AAG24204.1| 280|Caenorhabditis elegans Hypothetical
protein W03F9.9 protein.
Length = 280
Score = 47.6 bits (108), Expect = 2e-06
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSL--------SNVPLKRFGRPEEIAGAVAFLASD 156
VN V PG V T F +A + A + S +P GRPE +A +AFLA
Sbjct: 188 VNIVQPGFVATGFTTAASGMSPDASAKMYEGIGANTSCIPAGYCGRPEHLASVIAFLADR 247
Query: 157 DAS-YITGETVVVAGG 201
AS YI G+T++ GG
Sbjct: 248 KASEYIVGQTIIADGG 263
>AC024791-25|AAK29888.4| 255|Caenorhabditis elegans Hypothetical
protein Y47G6A.21 protein.
Length = 255
Score = 47.6 bits (108), Expect = 2e-06
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAG----AEKSLSNVPLKRFGRPEEIAGAVAFLASDDASY 168
VN V PG++VT A EA EKS + L R G E+A A+ FL+S+ +S+
Sbjct: 178 VNAVCPGVIVTNIHRASGQDEATYAAFLEKSKTTHALGRPGTTSEVAEAILFLSSEKSSF 237
Query: 169 ITGETVVVAGG 201
TG+ + V GG
Sbjct: 238 TTGQLLKVDGG 248
>Z54269-2|CAA91019.1| 278|Caenorhabditis elegans Hypothetical
protein F02C12.2 protein.
Length = 278
Score = 46.8 bits (106), Expect = 4e-06
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Frame = +1
Query: 1 VNCVAPGIVVTKF-ASAITNSEAGAEK-------SLSNVPLKRFGRPEEIAGAVAFLASD 156
VN V PGIV T F A+A +S A+K + + +P GRPE IA A+AFLA
Sbjct: 188 VNTVNPGIVQTGFQANASGSSSDDAQKFYDDMGSNTTAIPCGFAGRPEHIAKAIAFLADR 247
Query: 157 DAS-YITGETVVVAGG 201
++S YI G+ ++ GG
Sbjct: 248 NSSEYIVGQNIIADGG 263
>Z66500-3|CAA91310.1| 309|Caenorhabditis elegans Hypothetical
protein T05C12.3 protein.
Length = 309
Score = 46.0 bits (104), Expect = 7e-06
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +1
Query: 4 NCVAPGIVVTKFA-SAITNSEAG--AEKSLSNVPLKRFGRPEEIAGAVAFLASDDASYIT 174
N V+PG + TK A + + E G AEK P R G PEE+A VAF++SD S++
Sbjct: 203 NAVSPGPIPTKGAWGRLFSGEMGDVAEKMKELNPEGRSGTPEEVANLVAFISSDHMSFMN 262
Query: 175 GETVVVAGG 201
G + + GG
Sbjct: 263 GVIIDLDGG 271
>AC024791-27|AAM43788.1| 254|Caenorhabditis elegans Hypothetical
protein Y47G6A.22 protein.
Length = 254
Score = 44.4 bits (100), Expect = 2e-05
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSE----AGAEKSLSNVPLKRFGRPEEIAGAVAFLASDDASY 168
VN V PG+ VT E A E+S + L R G E+A A+ FLAS+ +S+
Sbjct: 177 VNAVCPGVTVTNLHRTSGQDETTYSAFLERSKTTHALGRPGDANEVAEAIYFLASEKSSF 236
Query: 169 ITGETVVVAGG 201
TGE + V GG
Sbjct: 237 TTGELLRVDGG 247
>AC006677-5|AAF39950.1| 280|Caenorhabditis elegans Hypothetical
protein R05D8.7 protein.
Length = 280
Score = 43.6 bits (98), Expect = 4e-05
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN-------VPLKRFGRPEEIAGAVAFLASDD 159
VN V+PG+V T F +A+ + ++K + +P+ G+PE IA + FLA +
Sbjct: 187 VNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRN 246
Query: 160 AS-YITGETVVVAGG 201
S YI G+++V GG
Sbjct: 247 LSFYILGQSIVADGG 261
>AC006677-6|AAF39953.1| 279|Caenorhabditis elegans Dehydrogenases,
short chain protein14 protein.
Length = 279
Score = 43.2 bits (97), Expect = 5e-05
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAI-----TNSEAG--AEKSLSNVPLKRFGRPEEIAGAVAFLASDD 159
VN V+PG VVT F A+ + + G E +P + G+P +IA +AFLA
Sbjct: 187 VNSVSPGAVVTGFGEAMGMPADMHEKYGHFMESRKECIPCGKMGQPIDIANIIAFLADRK 246
Query: 160 -ASYITGETVVVAGGA 204
+SYI G+++V GG+
Sbjct: 247 LSSYIIGQSIVADGGS 262
>AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical
protein T01G6.10 protein.
Length = 275
Score = 42.3 bits (95), Expect = 9e-05
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN-------VPLKRFGRPEEIAGAVAFLAS-D 156
VN V+PG+V + F A+ SE ++ N +P G+PE+IA + FLA
Sbjct: 185 VNSVSPGVVTSGFLGAMGMSEQVQKQIEENFTSNRACIPAGVCGKPEDIAELIIFLADRK 244
Query: 157 DASYITGETVVVAGG 201
+SYI G+++V GG
Sbjct: 245 RSSYIIGQSIVADGG 259
>AF022978-8|AAG24176.1| 279|Caenorhabditis elegans Hypothetical
protein T01G6.1 protein.
Length = 279
Score = 42.3 bits (95), Expect = 9e-05
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN--------VPLKRFGRPEEIAGAVAFLASD 156
VN V+PGI+ T F A+ E A+K + N +P G+PE+IA + FL+
Sbjct: 185 VNSVSPGIIATNFMGAMGVPEQ-AQKKIVNLFASEKGCIPAGVPGKPEDIAELIVFLSDR 243
Query: 157 DAS-YITGETVVVAGG 201
S YI G+++V GG
Sbjct: 244 KRSFYIVGQSIVADGG 259
>Z79756-2|CAB02118.1| 313|Caenorhabditis elegans Hypothetical
protein F53C11.3 protein.
Length = 313
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Frame = +1
Query: 4 NCVAPGIVVTK------FASAITNSEAGAEKSLSNVPLKRFGRPEEIAGAVAFLASDDAS 165
N +APG + T+ FA + +S + ++VP+ R G PEEIA AF++SD S
Sbjct: 204 NAIAPGPIPTEGAFGRLFAGELKDS---GDAMKASVPVGRLGHPEEIANLAAFMSSDFMS 260
Query: 166 YITGETVVVAGG 201
++ G + GG
Sbjct: 261 WMNGAIIDFDGG 272
>AC006629-7|ABF71723.1| 402|Caenorhabditis elegans Hypothetical
protein F12E12.11 protein.
Length = 402
Score = 41.1 bits (92), Expect = 2e-04
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN-------VPLKRFGRPEEIAGAVAFLASDD 159
VN V+PG+V T A+ EK++ VP +P EIA +AFLA
Sbjct: 29 VNSVSPGVVYTGIGEAMGFPPGAFEKTMKFYESHKECVPCGHMAQPVEIAQVIAFLADRT 88
Query: 160 -ASYITGETVVVAGGA 204
+SYI G++++ GG+
Sbjct: 89 MSSYIIGQSIIADGGS 104
Score = 39.9 bits (89), Expect = 5e-04
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN-------VPLKRFGRPEEIAGAVAFLASDD 159
VN V+PG V T F A+ EK + VP +P EIA +AFLA
Sbjct: 309 VNSVSPGGVYTGFGEAMGFPPGALEKIMKYFESHKECVPCGHMAQPIEIAQVIAFLADRT 368
Query: 160 -ASYITGETVVVAGGA 204
+SYI G++++ GG+
Sbjct: 369 MSSYIIGQSIIADGGS 384
>Z72508-2|CAA96635.1| 284|Caenorhabditis elegans Hypothetical
protein F28H7.2 protein.
Length = 284
Score = 38.3 bits (85), Expect = 0.001
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASA---ITNSEA-------GAEKSLSNVPLKRFGRPEEIAGAVAFLA 150
VN V+PG V T F++ +T ++ GA++ +P PE+IA +AFLA
Sbjct: 187 VNSVSPGAVSTGFSAVSRGLTEEKSKAFYDYLGAQREC--IPRGFCAVPEDIAKVIAFLA 244
Query: 151 SDDAS-YITGETVVVAGG 201
+AS YI G+T+V GG
Sbjct: 245 DRNASNYIIGQTIVADGG 262
>Z81463-2|CAB03851.1| 342|Caenorhabditis elegans Hypothetical
protein C06B8.3 protein.
Length = 342
Score = 37.9 bits (84), Expect = 0.002
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN-------VPLKRFGRPEEIAGAVAFLASDD 159
VN V+PG +T F A+ EK + + +P RP +IA + FLA
Sbjct: 66 VNSVSPGFTLTGFGDAMGFPPGALEKVIKHYASHKECIPSGVVARPGDIAQIILFLADRT 125
Query: 160 -ASYITGETVVVAGGA 204
+SYI G++++ GG+
Sbjct: 126 MSSYIIGQSIIADGGS 141
>U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical
protein C06E4.6 protein.
Length = 274
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN--------VPLKRFGRPEEIAGAVAFLASD 156
+N V PG V T F++A A + +P G+P+ +A +AFL
Sbjct: 187 INVVQPGFVSTGFSTAARGLSADESVKFYDLMGSLPHCIPAGYCGQPDHLASVIAFLVDR 246
Query: 157 DAS-YITGETVVVAGGA 204
S YI G+T++ GG+
Sbjct: 247 KVSEYIVGQTIIADGGS 263
>AC006677-7|AAF39944.1| 281|Caenorhabditis elegans Hypothetical
protein R05D8.9 protein.
Length = 281
Score = 37.5 bits (83), Expect = 0.002
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN-------VPLKRFGRPEEIAGAVAFLASDD 159
VN V+PG V T F A+ E+ + +P +P +IA +AFLA
Sbjct: 188 VNSVSPGGVTTGFGEAMGMPSGAFEEMMKFMESRKECIPSGAVAKPIDIANIIAFLADRK 247
Query: 160 -ASYITGETVVVAGGA 204
+SYI G+++V GG+
Sbjct: 248 LSSYIIGQSIVADGGS 263
>U41277-3|AAA82474.1| 154|Caenorhabditis elegans Hypothetical
protein C06E4.4 protein.
Length = 154
Score = 33.9 bits (74), Expect = 0.030
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSL--------SNVPLKRFGRPEEIAGAVAFLA 150
VN V PG+V T F T + ++ S +P GRPE+IA A+AFL+
Sbjct: 97 VNTVNPGVVATGFMEVATGLSSEQSQTFYDNVGSNPSAIPCGYSGRPEQIAKAIAFLS 154
>Z83238-12|CAB05801.1| 279|Caenorhabditis elegans Hypothetical
protein F26D2.15 protein.
Length = 279
Score = 33.5 bits (73), Expect = 0.040
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN-------VPLKRFGRPEEIAGAVAFLASDD 159
VN V+PG T F A+ +K +S P +P +IA + FLA
Sbjct: 187 VNSVSPGFTKTGFGEAMGFPPIAMKKVISFYESHKECAPSGAIAQPGDIAQVILFLADRT 246
Query: 160 -ASYITGETVVVAGGA 204
+SYI G++++ GG+
Sbjct: 247 MSSYIIGQSIIADGGS 262
>Z81513-14|CAB04187.1| 279|Caenorhabditis elegans Hypothetical
protein F26D2.15 protein.
Length = 279
Score = 33.5 bits (73), Expect = 0.040
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAEKSLSN-------VPLKRFGRPEEIAGAVAFLASDD 159
VN V+PG T F A+ +K +S P +P +IA + FLA
Sbjct: 187 VNSVSPGFTKTGFGEAMGFPPIAMKKVISFYESHKECAPSGAIAQPGDIAQVILFLADRT 246
Query: 160 -ASYITGETVVVAGGA 204
+SYI G++++ GG+
Sbjct: 247 MSSYIIGQSIIADGGS 262
>Z81457-3|CAB03815.1| 279|Caenorhabditis elegans Hypothetical
protein C01G12.5 protein.
Length = 279
Score = 30.7 bits (66), Expect = 0.28
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Frame = +1
Query: 1 VNCVAPGIVVTKFASAITNSEAGAE---KSLSN----VPLKRFGRPEEIAGAVAFLASDD 159
VN V+PG + T + ++ E K + + P+ +P ++A + FLA
Sbjct: 187 VNSVSPGDIRTGIYETMGMNKESVENIYKFMESRKECCPIGTIAQPVDVANIIVFLADRK 246
Query: 160 -ASYITGETVVVAGGA 204
+SYI G+++V GG+
Sbjct: 247 LSSYIIGQSIVADGGS 262
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 30.7 bits (66), Expect = 0.28
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = -1
Query: 233 TLATTQSRAGAPPATTTVSPVM*LASSEAKNATAPAISSGLPNLFNGTFDRLFSAPASEF 54
T AT + P+T + + SS AKN +PA G N TF + S SE
Sbjct: 608 TTATVAPTSSTVPSTPVSNVMAATISSTAKNTPSPA---GSVTTINATFSKPSSRHPSEE 664
Query: 53 VIADANFVTTIPGAT 9
V + T +P A+
Sbjct: 665 VYRSPSQPTNVPWAS 679
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 30.7 bits (66), Expect = 0.28
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = -1
Query: 233 TLATTQSRAGAPPATTTVSPVM*LASSEAKNATAPAISSGLPNLFNGTFDRLFSAPASEF 54
T AT + P+T + + SS AKN +PA G N TF + S SE
Sbjct: 608 TTATVAPTSSTVPSTPVSNVMAATISSTAKNTPSPA---GSVTTINATFSKPSSRHPSEE 664
Query: 53 VIADANFVTTIPGAT 9
V + T +P A+
Sbjct: 665 VYRSPSQPTNVPWAS 679
>AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical
protein H34I24.2 protein.
Length = 458
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 227 ATTQSRAGAPPATTTVSPVM*LASSEAKNATAPAISSG 114
ATTQ+ A + +TVSP ++E +++A ++SG
Sbjct: 64 ATTQAAASSGAPVSTVSPSSGATTAEPSSSSAAPVTSG 101
>Z93382-3|CAB07613.1| 292|Caenorhabditis elegans Hypothetical
protein F45G2.4 protein.
Length = 292
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 322 KEVYLYHSFIDSDASSMPLSEI 257
K+VYLY S+I + +PL EI
Sbjct: 38 KDVYLYRSYIAQGQAFIPLKEI 59
>U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical
protein C49C8.1 protein.
Length = 517
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 202 PLQQPQQSLR*CSWRHPKP 146
PLQ P S+R S +HPKP
Sbjct: 447 PLQSPHISIRKSSSKHPKP 465
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -1
Query: 218 QSRAGAPPATTTVSPVM*LASSEAKNATAPAISSGLP---NLFNG-TFDRL 78
+SR+ T V+PV + K + PA +S LP NL NG FD L
Sbjct: 84 ESRSSPKLVETVVAPVSGARKRKPKERSPPAAASPLPDFSNLMNGFMFDPL 134
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -1
Query: 218 QSRAGAPPATTTVSPVM*LASSEAKNATAPAISSGLP---NLFNG-TFDRL 78
+SR+ T V+PV + K + PA +S LP NL NG FD L
Sbjct: 84 ESRSSPKLVETVVAPVSGARKRKPKERSPPAAASPLPDFSNLMNGFMFDPL 134
>AF077546-7|AAC26319.1| 534|Caenorhabditis elegans Hypothetical
protein T08E11.8 protein.
Length = 534
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 88 NVPLKRFGRPEEIAGAVAFLASDDASYITGETVVV 192
N+P K F EE+ ++ ++ DD + TVV+
Sbjct: 193 NIPFKNFTHFEEVTMPISNISEDDIRALVNVTVVL 227
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -1
Query: 218 QSRAGAPPATTTVSPVM*LASSEAKNATAPAISSGLP---NLFNG-TFDRL 78
+SR+ T V+PV + K + PA +S LP NL NG FD L
Sbjct: 84 ESRSSPKLVETVVAPVSGARKRKPKERSPPAAASPLPDFSNLMNGFMFDPL 134
>Z69361-1|CAE17943.1| 468|Caenorhabditis elegans Hypothetical
protein T13H10.2 protein.
Length = 468
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 219 SKSCGRPSSNHNSLSGDVAGVIRSQKRYGTSNFFWS 112
S+ C RPS H SL G + I K +FF S
Sbjct: 430 SRKCVRPSVRHRSLHGWYSYDIHFSKFLNVESFFCS 465
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 22.6 bits (46), Expect(2) = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 206 GAPPATTTVSPVM*LASSEAKNATA 132
GA PAT+ +P L + A ATA
Sbjct: 218 GAAPATSNAAPTSGLFGNSAPAATA 242
Score = 21.8 bits (44), Expect(2) = 6.5
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 140 ATAPAISSGLPNLFNGTFDRLFSAPASEFVIADANFVTTIPGA 12
+TAPA ++ +G F SAP+S +T P A
Sbjct: 264 STAPATTAATTTATSGLFGAPTSAPSSAPATGGLFGASTAPAA 306
>AB259784-1|BAF48662.1| 323|Caenorhabditis elegans ROG-1 protein.
Length = 323
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 234 DSSDDSKSCGRPSSNHNSLSGD 169
D +D+S S G PSS+H+ L D
Sbjct: 269 DYADESSSYGYPSSHHHHLPHD 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,049,630
Number of Sequences: 27780
Number of extensions: 165238
Number of successful extensions: 594
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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