Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11p06
(686 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 35 0.010
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.039
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 32 0.068
SPBC839.05c |rps1701|rps17-1|40S ribosomal protein S17|Schizosac... 30 0.27
SPCC24B10.09 |rps1702|rps17-2, rps17|40S ribosomal protein S17|S... 30 0.27
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 30 0.36
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 29 0.63
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 29 0.63
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.83
SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subuni... 29 0.83
SPACUNK4.11c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.83
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 28 1.5
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 1.5
SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces pomb... 28 1.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.5
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 1.9
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 27 2.5
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 27 2.5
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 2.5
SPAC140.04 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.5
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.9
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 26 5.9
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 26 5.9
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 25 7.8
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 25 7.8
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 25 7.8
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 25 7.8
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 35.1 bits (77), Expect = 0.010
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +3
Query: 192 TRDKYENMLAALREENKMLSQQHLLELNSLKAKIAYEIQEREK--ERADHVAMMKELHL- 362
T + YE + K+L +H+LEL + YE RE+ R + +K+ H
Sbjct: 252 TSEIYEETHCDFLKLKKLLINRHMLELINTTETNIYERYRREQLTNRKSGIPKLKKEHYE 311
Query: 363 KLNSERKTKEKLEDRVVNSTEAQASQAELEKRV 461
+LN+E++ ++ ++ N TE+ QA+ EK +
Sbjct: 312 RLNNEKRAIQQKITQMTNETES-FFQAKEEKMI 343
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 33.1 bits (72), Expect = 0.039
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 222 ALREENKMLSQQHLLELNSLKAKIAYEIQEREKE-RADHVAMMKELHLKLNSERKTKEKL 398
AL+ + LSQQ E N I E+ E K+ V+ KE+ + EK
Sbjct: 247 ALQRKVSSLSQQ-FTESNLRYQNIVAELSEMRKQYEFSQVSFEKEISSQKQISELWMEKC 305
Query: 399 EDRVVNSTEAQASQAELEKRVRDLSSS 479
ED + E Q S ELEK + SS
Sbjct: 306 EDCSLRLKELQNSNGELEKLLEAAQSS 332
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 32.3 bits (70), Expect = 0.068
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Frame = +3
Query: 171 FQADKK---VTRDKYENMLAALREENKMLSQQHLLELNSLKAKIAYEIQEREKERADHVA 341
+ A+KK V + K + +++ + K+ + NS K + E ++ K A+ A
Sbjct: 155 YLAEKKNAVVEKGKSKPSKKSVKAKKKLRLAEKPASNNSKAGKSSQESKKSSKAPAESAA 214
Query: 342 -MMKELHLKLNSERKTKEKLEDRVV-NSTEAQASQAELEKRVRDLSSS 479
++KE K++ +K+K+K + V NST +QAS+ +K+ ++ SS
Sbjct: 215 AVIKED--KVSDRKKSKKKPKKTPVSNSTASQASENASDKKTKEKKSS 260
>SPBC839.05c |rps1701|rps17-1|40S ribosomal protein
S17|Schizosaccharomyces pombe|chr 2|||Manual
Length = 131
Score = 30.3 bits (65), Expect = 0.27
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Frame = +3
Query: 156 RMEEAFQADKKVTRDKYENMLAALREENKMLSQQ-HLLEL--NSLKAKIAYEIQEREKER 326
R+ FQ +K++ + ++A+ R NK+ HL++ I++++QE E+ER
Sbjct: 23 RLTLDFQTNKRIVDEVA--IIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERER 80
Query: 327 AD-HVAMMKELHL-KLNSERKTKEKLE----DRVVNSTEAQASQAELEKR 458
D +V + EL + ++N ++ TK+ L+ D++ A A Q +R
Sbjct: 81 KDQYVPEVSELEVDRVNVDQDTKDMLKSLGYDQIPVRVLAPAPQERFRRR 130
>SPCC24B10.09 |rps1702|rps17-2, rps17|40S ribosomal protein
S17|Schizosaccharomyces pombe|chr 3|||Manual
Length = 132
Score = 30.3 bits (65), Expect = 0.27
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Frame = +3
Query: 156 RMEEAFQADKKVTRDKYENMLAALREENKMLSQQ-HLLEL--NSLKAKIAYEIQEREKER 326
R+ FQ +K++ + ++A+ R NK+ HL++ I++++QE E+ER
Sbjct: 23 RLTLDFQTNKRIVDEVA--IIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERER 80
Query: 327 AD-HVAMMKELHL-KLNSERKTKEKLE 401
D +V + EL K+N ++ TK+ L+
Sbjct: 81 KDQYVPEVSELEKDKINVDQDTKDMLK 107
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 29.9 bits (64), Expect = 0.36
Identities = 37/166 (22%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Frame = +3
Query: 153 ARMEEAFQADKKVTRDKYENMLAALREE-----NKMLSQQHLLELNSLKAKIAYEIQERE 317
A +EE+ + ++ T + E ALRE+ NK++SQ+ + L + + +
Sbjct: 197 AMLEESLEVERSRTSELQEQFSVALREKAEAEANKIVSQKGMESLEIM-------LNSMK 249
Query: 318 KERADHVAMMKELHLKL--NSERKTKEKLEDRVVNSTEAQASQAELEKRVRDLSSSXXXX 491
E +AM++E H ++ +E + + +L+D ++ E +A+ +E + +L S+
Sbjct: 250 SENHQRMAMLEENHARVMETAELQHQAELQD-FASNIEQKANSLIMEYK-NELQSA---E 304
Query: 492 XXXXXXXXXXTVETPAQLVRLQQK----LALIEQSHSVAIREEQIK 617
T E ++ RLQ++ L +++ S+A++ Q K
Sbjct: 305 EHFSHKIKELTSENELKISRLQEEKDSLLKKVQEGASLAMQRVQNK 350
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 29.1 bits (62), Expect = 0.63
Identities = 20/88 (22%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Frame = +3
Query: 147 EKARMEEAFQADKKVT---RDKYENMLAALREENKMLSQQHLLELNSLKAKIAYE--IQE 311
+ + MEE +++ +DK E+ +L E+ + ++ Q+ L +AK+ + +
Sbjct: 84 DSSEMEEYLLGRRRLDDLLKDKIEDQNNSL-EKTEFIALQNANSLQDTQAKLRLDPLLAI 142
Query: 312 REKERADHVAMMKELHLKLNSERKTKEK 395
+++E+ +M++ L+S+RK+KE+
Sbjct: 143 KQQEQKQLQTLMEKRKYSLDSDRKSKER 170
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 29.1 bits (62), Expect = 0.63
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +3
Query: 198 DKYENMLAALREENKMLSQQHLLELNSLKAKIAYEIQEREKERADHVAMMKELHLKLNSE 377
D+ L +L EE+K +SQ+ K + Y+I + + A E +L +E
Sbjct: 639 DEMTQRLVSLDEESKAVSQR--------KLDLEYKINNSKTQLATATEEYHEHSKQLEAE 690
Query: 378 RKTKEKLED--RVVNSTEAQASQAELEKRVR 464
++ KLED + VN TE +A + E++ R
Sbjct: 691 KQELSKLEDGLKSVNLTE-EAPKPEVDSTPR 720
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.7 bits (61), Expect = 0.83
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Frame = +3
Query: 168 AFQADKKVTRDKYENMLAALREENKMLSQQHLL--ELNSLKAKIAYEIQEREK------E 323
A QA +K K + REE ++ +Q EL K + + +EREK +
Sbjct: 621 AEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQ 680
Query: 324 RADHVAMMKELHLK------LNSERKTKEKLEDRVVNSTEAQASQAELEKRVRDL 470
AD M +E L+ + ERK +EKL+ + + E E++ R L
Sbjct: 681 EADREKMAREQRLREEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRL 735
>SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subunit
Rad15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 772
Score = 28.7 bits (61), Expect = 0.83
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 156 RMEEAFQADKKVTRDKYENMLAALREENKMLSQQHLLELNSLKAKIAYEIQEREKERADH 335
++ E Q+D K +D+Y+ ++ L++ N + + L + E RA+H
Sbjct: 268 KVNEVKQSDSKKLQDEYQKLVRGLQDANAANDEDQFMANPVLPEDVLKEAVPGNIRRAEH 327
Query: 336 -VAMMKELHLKLNSERK 383
+A +K L + K
Sbjct: 328 FIAFLKRFVEYLKTRMK 344
>SPACUNK4.11c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 188
Score = 28.7 bits (61), Expect = 0.83
Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +3
Query: 183 KKVTRD-KYENMLAALREENKMLSQQHLLELNSLKAKIAYEIQERE--KERADHVAMMKE 353
+K+TR+ +YE+ L EEN + + H E N ++ + ++ + +E +E D + K
Sbjct: 47 QKMTRNVEYESGYGGLIEENDL--ESHSNEPNLVQGRASFGLFNKELGEENVDEKDVSKN 104
Query: 354 LHLKLNSERKT-KEKLEDRVVNSTEAQASQAELEKRV 461
+ +N + T +L +R E + +AE +++
Sbjct: 105 EEVDVNGTKITDTSELTERERRKQELVSKKAEASRKM 141
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 270 APANVAAIAFYSPLSVPLTCSHTYPL 193
AP+N A+ YSP VPLT ++YPL
Sbjct: 29 APSNSASSTPYSPQQVPLT-HNSYPL 53
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.9 bits (59), Expect = 1.5
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Frame = +3
Query: 147 EKARMEEAFQADKKVTRDKYENMLAALREENKMLSQQHLLELNSLKAKIAYEIQEREKER 326
EKA + +K TR YE + E+ K L + S++A +++E E E
Sbjct: 412 EKAAKVKNDCTSEKKTRQSYEQQTVKIEEQLKFLLNKEKKLKKSIEA-LSFEKSEAENSL 470
Query: 327 ADH-------VAMMKELHLKLNSERKTKEKLEDRVVNSTEAQASQAELEKR 458
+ H + + +L L+L E + + + + TE ++ E +++
Sbjct: 471 SSHDIDSQKLNSEIADLSLRLQQEELSLDDIRKSLQGKTEGISNAIEEKQK 521
>SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 415
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +3
Query: 276 SLKAKIAYEIQEREKERADHVAMMKELHLKLNSERKTKEKLEDRVVNSTEAQASQAELEK 455
S + + A Q+ + + DH+ + K+ H+KLN+ + K D + E + E
Sbjct: 4 STQTRHATYFQDENQLQKDHIYVKKKSHIKLNTGVRAPFKAVDNINQQDEPTLIEGNNES 63
Query: 456 RV 461
+
Sbjct: 64 SI 65
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.9 bits (59), Expect = 1.5
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 5/202 (2%)
Frame = -2
Query: 685 SSSATLSS*RAQIFLADSSALFAFICSSLIATECDCSISANFC*SLTNWAGVSTVRA-SA 509
SSS T SS + + S A + SSL ++ + + SA S T+ + ST + SA
Sbjct: 131 SSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSA 190
Query: 508 RCSLLWAASKELLRSLTRFSSSACDA*ASVELTTRXXXXXXXXXXXXXFKCNSFIIAT*S 329
S L ++S S T SSS AS T+ +S I +T S
Sbjct: 191 TSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVS 250
Query: 328 ALS--FSLSCIS*AILAFRLLSSSKCCCDSILFSSLSAANMFSYLSLVTFLSAWKA--SS 161
+ + S + + A A SS++ S+L SS ++ S + T SA +S
Sbjct: 251 SSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTS 310
Query: 160 MRAFSTVRVERDRVRAVTESSS 95
+ + +T + +V+ ++S
Sbjct: 311 VNSTTTTSASSTPLSSVSSANS 332
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.5 bits (58), Expect = 1.9
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +3
Query: 147 EKARME-EAFQADKKVTRDKYENMLAALREENKMLSQQHLLELNSLKAKIAYEIQEREKE 323
EK R E + Q+ V +YEN+L + NK L + N LK I +Q+ E
Sbjct: 1035 EKKRAENDDLQSKLSVVSSEYENLLLISSQTNKSLED----KTNQLK-YIEKNVQKLLDE 1089
Query: 324 RADHVAMMKELHLKLNSERKTKEKLEDRVVNSTEAQASQAEL 449
+ ++EL K + +++D ++ + Q +L
Sbjct: 1090 KDQRNVELEELTSKYGKLGEENAQIKDELLALRKKSKKQHDL 1131
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 27.1 bits (57), Expect = 2.5
Identities = 23/103 (22%), Positives = 53/103 (51%)
Frame = +3
Query: 150 KARMEEAFQADKKVTRDKYENMLAALREENKMLSQQHLLELNSLKAKIAYEIQEREKERA 329
K ++E A QA + +YE +AA E+ ++ ++ + + + E QERE++
Sbjct: 850 KRQLERAIQA-----QIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEKQERERQLQ 904
Query: 330 DHVAMMKELHLKLNSERKTKEKLEDRVVNSTEAQASQAELEKR 458
+ M+E L+ RK+++K + ++ ++ + Q+ +K+
Sbjct: 905 EERQKMQEEVLEW---RKSQQKASEDDMSLSDDEEKQSGKKKK 944
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 2.5
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +3
Query: 228 REENKMLSQQHLLELNSLKAKIAYEIQERE--KERADHVAMMKELHLKLNS-----ERKT 386
REEN ++++ L N L + E Q K A + +K L+S E +
Sbjct: 217 REENVTITRKTKLSSNILYSDSDTERQSDSGSKNVARQFSRIKRKRKVLSSSSEDDESSS 276
Query: 387 KEKLEDRVVNSTEAQASQAELEKRVRDL 470
E L ++ STE + ELE+ V+DL
Sbjct: 277 PEDLLKPIIRSTEEMENLNELEQEVQDL 304
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 234 ENKMLSQQHLLELNSLKAKIAYEIQ-EREKERADHVAMMKELHLKLNSERKTKEKLEDRV 410
+ K L +Q E ++ K A ++ E+E+++ + ++E + K EKLE
Sbjct: 76 KEKKLQKQRAQE-ERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKER 134
Query: 411 VNSTEAQASQAELEKRVRD 467
+ E Q + E ++++R+
Sbjct: 135 IRLQEQQRRKEERDQKLRE 153
>SPAC140.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 295
Score = 27.1 bits (57), Expect = 2.5
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 282 KAKIAYEIQEREKERADHVAMMKELHLKLNSERK 383
K Y+ EKER + + +KE+H K+ +++
Sbjct: 221 KGTAFYQFSFDEKEREEQLLSLKEIHAKVTQQQR 254
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 5.9
Identities = 54/219 (24%), Positives = 90/219 (41%)
Frame = -2
Query: 685 SSSATLSS*RAQIFLADSSALFAFICSSLIATECDCSISANFC*SLTNWAGVSTVRASAR 506
SS T SS + L SS A + SS T + SIS++ SL++ S S+
Sbjct: 125 SSEYTPSSTESSSLLDPSSVSSAILPSS---TSVEVSISSS---SLSS----SDPLTSST 174
Query: 505 CSLLWAASKELLRSLTRFSSSACDA*ASVELTTRXXXXXXXXXXXXXFKCNSFIIAT*SA 326
S L +++ S++ SSS + A ++ +S T S+
Sbjct: 175 FSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSS 234
Query: 325 LSFSLSCIS*AILAFRLLSSSKCCCDSILFSSLSAANMFSYLSLVTFLSAWKASSMRAFS 146
LS S + + + S S S SS S++++ S S + +S++ + S
Sbjct: 235 LSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSS 294
Query: 145 TVRVERDRVRAVTESSSLPSIVFSVLLSAFKLISNASFS 29
+ + SSS S FS LS+ + S++SFS
Sbjct: 295 SSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFS 333
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 234 ENKMLSQQHLLELNS--LKAKIAYEIQEREKERADHVAMMKELHLKLNSERKTKEKLEDR 407
E+++LS+ ++ S L + ++QE+ DH E L+L S R+ EK +
Sbjct: 161 EHRLLSKDETDDIESAYLNLRSHLQVQEQVYAEKDH-----EYSLQLQSYREAAEKAKQD 215
Query: 408 VVNSTEAQASQAEL 449
++ + E +S+ +
Sbjct: 216 ILETKENLSSELSI 229
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 25.8 bits (54), Expect = 5.9
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = -2
Query: 592 TECDCSISANFC*SLTNWAGVSTVRASARCS 500
T C + N+C NW V +V + CS
Sbjct: 446 TLCTVFSAPNYCGEFDNWGAVMSVNSELLCS 476
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 25.4 bits (53), Expect = 7.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 212 VLILIPCNFFVCLESFFH 159
+LI++PC F+C E H
Sbjct: 756 LLIIVPCGHFLCRECLTH 773
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 278 SESQDSLRDTREGEGES*SCCYDERVAFEIEQRKEDERE 394
SES+ S ++ ES S +E V + E++KE E
Sbjct: 101 SESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSE 139
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Frame = +3
Query: 555 QQKLALIE-QSHSV----AIREEQIKAKRAEESARK 647
++++ LIE Q H +++EQI AKR EE AR+
Sbjct: 149 KERIRLIEEQKHKENEQRRLKQEQIDAKRKEEEARE 184
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 150 KARMEEAFQADKKVTRDKYENMLAALREENKMLSQQHLLEL 272
+ R EEA +K +D +++ + + N+M ++H L+L
Sbjct: 527 RKRTEEAVLCIQKDVKDNFDSAVLPVFHANQMFIKKHRLQL 567
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,215,717
Number of Sequences: 5004
Number of extensions: 37543
Number of successful extensions: 182
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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