Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11p01
(529 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 45 3e-05
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 42 2e-04
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 40 0.001
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 39 0.003
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 34 0.061
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 33 0.11
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 33 0.14
01_01_0990 + 7847066-7847478,7847713-7848679 33 0.19
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 33 0.19
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 32 0.25
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 32 0.33
01_05_0421 + 21990034-21990392,21991691-21992681 32 0.33
12_02_0916 - 24271151-24271894 31 0.43
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 31 0.43
09_02_0366 + 7941550-7942161,7942230-7942775 31 0.43
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 31 0.57
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 31 0.57
01_06_1284 + 35994595-35995074 26 0.85
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 30 1.0
07_03_0507 - 18871260-18871361,18871444-18871560,18871792-188721... 30 1.0
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 25 1.3
03_04_0188 - 18241815-18242477 30 1.3
02_05_0340 + 28105222-28105960,28106844-28106987,28107083-281072... 30 1.3
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 30 1.3
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 30 1.3
02_05_0877 + 32403363-32404662,32406545-32406630,32406709-324070... 29 1.7
09_06_0259 - 21906612-21907109 29 2.3
09_04_0564 + 18565583-18566449,18569662-18570123 29 2.3
08_02_1172 + 24898290-24899141,24900864-24901328 29 2.3
03_05_0026 + 19966616-19966703,19967992-19968058,19968599-199686... 29 2.3
12_02_0903 - 24179533-24180120 29 3.1
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 29 3.1
01_06_1412 - 37140654-37141088,37141549-37142214 29 3.1
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 28 4.0
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 28 4.0
06_03_0743 + 24069752-24070483,24071890-24072345 28 4.0
11_03_0135 - 10547460-10547558,10547926-10548086,10548183-105483... 28 5.3
03_02_0040 + 5221015-5221322,5221423-5222254 28 5.3
06_03_0925 - 25992699-25992836,25992920-25993033,25993199-259933... 27 7.1
05_05_0022 + 21592403-21593083,21593720-21594208 27 7.1
06_03_1454 - 30261240-30261470,30261896-30262615,30262700-302628... 27 9.3
03_06_0607 + 35037467-35038624 27 9.3
03_05_0981 - 29391027-29391099,29391227-29391350,29391443-293915... 27 9.3
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 45.2 bits (102), Expect = 3e-05
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 8/140 (5%)
Frame = +3
Query: 3 AYLKLHMQLHNDVKKFKC--SKCEDMLPTKNCLKIHMKKHTKVKNFKC--DYCHKLFVSK 170
A+LK HMQ H+D + F C C K+ L HM KH + K F C D C + F K
Sbjct: 73 AHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKH-QGKLFTCSMDGCGRKFSIK 131
Query: 171 ITMERH-RQTHEGQPIDCQVKCTQCDRTMHSTLLR--THIARAHSSSLDDDVKRPYKCTT 341
M+RH ++ HE + + C + + + + + + S + D C
Sbjct: 132 ANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEESHVKLDYVEVVCCEP 191
Query: 342 -CGKSFIVKINLNLHIRVCH 398
C K+F L H + CH
Sbjct: 192 GCMKTFTNVECLRAHNQACH 211
Score = 35.5 bits (78), Expect = 0.027
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Frame = +3
Query: 63 CEDMLPTKNCLKIHMKK-HTKVKNFKCDYCHKLFVSKITMERHRQTHEGQPIDCQVKCT- 236
C CL+ H + H V+ CD C + + K ++RH + HE P ++KC+
Sbjct: 193 CMKTFTNVECLRAHNQACHQYVQ---CDICGEKHLKK-NIKRHLRAHEEVPSTERIKCSF 248
Query: 237 ---QCDRTMHSTLLRTHIARAHSSSLDDDVKRPYKC--TTCGKSFIVK 365
+C + S L + HI +H D VK P+ C T C K F K
Sbjct: 249 EGCECSFSNKSNLTK-HIKASH-----DQVK-PFACRFTGCEKVFPYK 289
Score = 32.7 bits (71), Expect = 0.19
Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 24/154 (15%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVK------------------NF 134
+++ H D++++KC C + K ++ HM H K + +
Sbjct: 1 MRVEATQHRDIRRYKCEFCTVVRSKKCLIRAHMVAHHKEELDKSEIYKSNGEKVVHEGDH 60
Query: 135 KCDYCHKLFVSKITMERHRQTHEGQ-----PI-DCQVKCTQCDRTMHSTLLRTHIARAHS 296
C C F +++H Q+H + P+ DC + D ++ +L+ H + +
Sbjct: 61 TCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDH-LNRHMLK-HQGKLFT 118
Query: 297 SSLDDDVKRPYKCTTCGKSFIVKINLNLHIRVCH 398
S+D CG+ F +K N+ H++ H
Sbjct: 119 CSMDG----------CGRKFSIKANMQRHVKEIH 142
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 42.3 bits (95), Expect = 2e-04
Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 9/139 (6%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSK--CEDMLPTKNC--LKIHMKKHTKVKNFKCDY--CHKLFVSK 170
LK H +H K F C C +L LK HMK H+ C Y C + F +
Sbjct: 89 LKRHFLIHTGEKNFVCPHEGCGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQE 148
Query: 171 ITMERH-RQTHEGQPIDCQVKCTQCDRTMHSTLLRTHIARAHSSSLDDDVKRPYKCTT-- 341
+ H +Q HE + + +H + ++ RPY C
Sbjct: 149 SKLRAHIKQQHEKGGLQNPGGSATNRSGLADHSHNSHTPKPSAAPPTPSADRPYVCPYDG 208
Query: 342 CGKSFIVKINLNLHIRVCH 398
C K++I + LNLH++ H
Sbjct: 209 CAKAYIHEYKLNLHLKKEH 227
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 63 CEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERHRQTHEGQPIDCQVKCTQC 242
C CLK H K + + CD C + K +RH++ HEG + +V+C
Sbjct: 392 CMKAFTNLECLKAHNKSCHR--HVVCDVCGTKQLKK-NFKRHQRMHEGSCVTERVRCHLK 448
Query: 243 DRTMHSTLLRTHIARAHSSSLDDDVKRPYKC--TTCGKSFIVK 365
D + S ++++ + H ++ + KRP+ C + CGKSF K
Sbjct: 449 DCKL-SFSKKSNLDK-HVKAVHEQ-KRPFVCGFSGCGKSFSYK 488
Score = 34.7 bits (76), Expect = 0.046
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Frame = +3
Query: 96 KIHMK--KHTKVKN-FKC--DYCHKLFVSKITMERHRQTHEGQPIDCQVKCTQCDRTMHS 260
K+H + HT + F C D C + K + RH TH+G+ C ++ T+
Sbjct: 272 KLHQECLVHTLFQRPFSCHVDGCPFSYSRKDHLNRHLLTHQGKLFACPMEGCNRKFTIKG 331
Query: 261 TLLRTHIARAHSSSLDDDVKRPYKC--TTCGKSFIVKINLNLH 383
+ R H+ H + K+ + C CGK+F L H
Sbjct: 332 NIQR-HVQEMHKDGSPCESKKEFICPEENCGKTFKYASKLQKH 373
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 38.7 bits (86), Expect = 0.003
Identities = 41/154 (26%), Positives = 57/154 (37%), Gaps = 24/154 (15%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSK--CEDMLPTKNCLKIHMKKHTKVKNFKCDY--CHKLFVSKIT 176
LK H +H K F C C L+ H+K H C + C K F S
Sbjct: 133 LKRHHLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSK 192
Query: 177 MERHRQTHE--GQPIDCQ---------------VKCTQCDRTMHSTLLRTHIARAHSSSL 305
++ H + HE G PI Q T T +T T + ++
Sbjct: 193 LKSHVKGHEKTGTPITAQYVPSSDKPQSSSKPATPATTKPTTPAATKTTTPASTKPTTPA 252
Query: 306 DDD-VKRPYKCTT--CGKSFIVKINLNLHIRVCH 398
+RPY C CGK++I LNLH++ H
Sbjct: 253 PTSFAERPYVCPYDGCGKAYIHSYKLNLHLKTQH 286
Score = 33.9 bits (74), Expect = 0.081
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +3
Query: 132 FKCDY--CHKLFVSKITMERHRQTHEGQPIDCQVKCTQCDRTMHSTLLRTHIARAHSSSL 305
F C Y C K FV + +H H + CQ S L R H+ H+
Sbjct: 87 FLCSYENCGKTFVDVAALRKHAHVHNERQYICQEPGCGKKFVDSSKLKRHHL--IHTGQK 144
Query: 306 DDDVKRPYKCTTCGKSFIVKINLNLHIR 389
D P CGK+F + NL H++
Sbjct: 145 DFICPHP----GCGKAFSLDFNLRSHLK 168
Score = 28.7 bits (61), Expect = 3.1
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Frame = +3
Query: 105 MKKHTKVKN---FKCDY--CHKLFVSKITMERHRQTHEGQPIDCQVKCTQCDRTMHSTL- 266
++KH V N + C C K FV ++RH H GQ D C +
Sbjct: 104 LRKHAHVHNERQYICQEPGCGKKFVDSSKLKRHHLIHTGQK-DFICPHPGCGKAFSLDFN 162
Query: 267 LRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLHIR 389
LR+H+ + H +L++ P+ CGK F L H++
Sbjct: 163 LRSHL-KTH--ALENYHVCPF--PACGKRFTSDSKLKSHVK 198
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 34.3 bits (75), Expect = 0.061
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 5/123 (4%)
Frame = +3
Query: 42 KKFKCS--KCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERHRQTH-EGQP 212
K+F+C C + L +H K VK+ C + F S + RH+ H + P
Sbjct: 538 KRFQCEIDYCRMTFKNRAELSVHKKNTCTVKS-----CGRHFRSHKYLRRHQSIHNDDMP 592
Query: 213 IDCQVKCTQCDRTMHSTLLRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKI--NLNLHI 386
C + C + R + H+ KRPYKCTT G S I K + H
Sbjct: 593 YKCPWE--GCSMAFKWSWDRGEHFQVHAG------KRPYKCTTPGCSKIYKFVSDFTRHK 644
Query: 387 RVC 395
R C
Sbjct: 645 RRC 647
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Frame = +3
Query: 6 YLKLHMQLHNDVKKFKC--SKCEDMLPTKNCLKIHMKKHTKVKNFKCDY--CHKL--FVS 167
YL+ H +HND +KC C H + H + +KC C K+ FVS
Sbjct: 579 YLRRHQSIHNDDMPYKCPWEGCSMAFKWSWDRGEHFQVHAGKRPYKCTTPGCSKIYKFVS 638
Query: 168 KITMERHR 191
T + R
Sbjct: 639 DFTRHKRR 646
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKV---KNFKCDYCHKLFVSKITM 179
+K H + KK+KC +C K ++ K HTK+ K ++CD C +F K +
Sbjct: 129 IKKHYSRKHGEKKWKCDRCS----KKYAVQSDWKAHTKICGTKEYRCD-CGTIFSRKDSF 183
Query: 180 ERHR 191
HR
Sbjct: 184 ITHR 187
Score = 28.3 bits (60), Expect = 4.0
Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 18/124 (14%)
Frame = +3
Query: 78 PTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERHRQTH--------------EGQPI 215
P + + K + C+ CHK F ++ HR+ H + +
Sbjct: 48 PDVEVVALSPKTLLATNRYICEVCHKGFQRDQNLQLHRRGHNLPWKLKQRSSTEAKKKVY 107
Query: 216 DC-QVKCTQCDRTM---HSTLLRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLH 383
C ++ C D T T ++ H +R H ++ +KC C K + V+ + H
Sbjct: 108 VCPEITCPHHDATRALGDLTGIKKHYSRKHG-------EKKWKCDRCSKKYAVQSDWKAH 160
Query: 384 IRVC 395
++C
Sbjct: 161 TKIC 164
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 33.1 bits (72), Expect = 0.14
Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 13/105 (12%)
Frame = +3
Query: 51 KCSKCEDMLPTKNCLKIHMKK-HTK-----VKNFKCDYCHKLFVSKITMERHRQTHEGQ- 209
KC C L +H + H K + + C C F ++ +ERH Q G
Sbjct: 464 KCKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERHVQEKHGAQ 523
Query: 210 --PIDCQVKCTQCDRT-MHSTLLRTHIARAHS---SSLDDDVKRP 326
++C C+ +++ LL HI HS S LD +RP
Sbjct: 524 YLQYSTLLRCISCNSNFLNTDLLWQHIVSDHSRDFSLLDHVPRRP 568
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERH 188
+K H + KK+KC KC ++ K H K + ++CD C LF + + H
Sbjct: 88 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAH-SKTCGTREYRCD-CGTLFSRRDSFITH 145
Query: 189 R 191
R
Sbjct: 146 R 146
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERH 188
+K H + KK+KC KC + K H K + ++CD C LF + + H
Sbjct: 138 IKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAH-SKVCGTREYRCD-CGTLFSRRDSFITH 195
Query: 189 R 191
R
Sbjct: 196 R 196
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERH 188
+K H + KK+KC KC ++ K H K + ++CD C LF + + H
Sbjct: 107 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAH-SKICGTREYRCD-CGTLFSRRDSFITH 164
Query: 189 R 191
R
Sbjct: 165 R 165
Score = 27.5 bits (58), Expect = 7.1
Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 19/125 (15%)
Frame = +3
Query: 78 PTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERHRQTH-------EGQPIDCQVK-- 230
P + + K F C+ C+K F + ++ HR+ H + P Q +
Sbjct: 25 PDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPAQAQRRRV 84
Query: 231 --CTQCDRTMHS--------TLLRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNL 380
C + H T ++ H R H ++ +KC C K + V+ +
Sbjct: 85 YLCPEPTCVHHDPARALGDLTGIKKHFCRKHG-------EKKWKCDKCSKRYAVQSDWKA 137
Query: 381 HIRVC 395
H ++C
Sbjct: 138 HSKIC 142
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERH 188
+K H + KK+KC KC ++ K H K + ++CD C LF + + H
Sbjct: 111 IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKT-CGSREYRCD-CGTLFSRRDSFITH 168
Query: 189 R 191
R
Sbjct: 169 R 169
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERH 188
+K H + KK+KC KC + K H K + +KCD C +F + + H
Sbjct: 70 IKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAH-SKICGTREYKCD-CGTIFSRRDSFITH 127
Query: 189 R 191
R
Sbjct: 128 R 128
>12_02_0916 - 24271151-24271894
Length = 247
Score = 31.5 bits (68), Expect = 0.43
Identities = 23/88 (26%), Positives = 33/88 (37%)
Frame = +3
Query: 135 KCDYCHKLFVSKITMERHRQTHEGQPIDCQVKCTQCDRTMHSTLLRTHIARAHSSSLDDD 314
+C C K F S + H+ +H P V + + T + A S
Sbjct: 92 RCSVCGKAFASYQALGGHKASHRKPPPPAMVDDDEVVVETKPAAIATPSSSASGVS-GGG 150
Query: 315 VKRPYKCTTCGKSFIVKINLNLHIRVCH 398
R ++C CGK+F L H R CH
Sbjct: 151 GGRAHECNVCGKAFPTGQALGGHKR-CH 177
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERH 188
+K H + K+++C +C + K H+ K+ + ++CD C LF K ++ H
Sbjct: 111 IKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHV-KNCGTREYRCD-CGILFSRKDSLLTH 168
Query: 189 R 191
R
Sbjct: 169 R 169
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 267 LRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLHIRVC 395
L+TH R H + RPY C CGK F V+ + H + C
Sbjct: 266 LQTHYRRKHGA-------RPYACRRCGKRFAVRGDWRTHEKNC 301
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 31.1 bits (67), Expect = 0.57
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERH 188
+K H + KK++C KC ++ K H K + ++CD C LF + + H
Sbjct: 111 IKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAH-SKTCGTREYRCD-CGTLFSRRDSFITH 168
Query: 189 R 191
R
Sbjct: 169 R 169
>03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 31.1 bits (67), Expect = 0.57
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = +3
Query: 6 YLKLHMQLHNDVKKFKC--SKCEDMLPTKNCLKIHMKKHTKVKNFKCDY--CHKLFVSKI 173
YLK H +H D + FKC C H++ HT + +KC C + F
Sbjct: 833 YLKRHQCVHRDERPFKCPWDGCPMTFKWLWAQTEHIRVHTGERPYKCSAPDCGQSFRYVS 892
Query: 174 TMERHRQ 194
RHR+
Sbjct: 893 DYSRHRK 899
>01_06_1284 + 35994595-35995074
Length = 159
Score = 25.8 bits (54), Expect(2) = 0.85
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 246 RTMHSTL---LRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLHIR 389
RT H+ L L + A A +++ + D R ++C CG F + L H+R
Sbjct: 54 RTSHTRLQAKLLSDPAAAAAAAAERDRARVHECAVCGVEFSMGQALGGHMR 104
Score = 23.4 bits (48), Expect(2) = 0.85
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +3
Query: 48 FKCSKCEDMLPTKNCLKIHMKKHTKVK 128
F+C C P+ L H HT+++
Sbjct: 35 FECKTCSKRFPSFQALGGHRTSHTRLQ 61
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +3
Query: 6 YLKLHMQLHNDVKKFKCS--KCEDMLPTKNCLKIHMKKHTKVKNFKCDY--CHKLFVSKI 173
YL H ++H D + KC+ C+ HM+ HT V+ ++C C + F
Sbjct: 1269 YLLQHRKVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYECQEPGCGQTFRFVS 1328
Query: 174 TMERHRQ 194
RH++
Sbjct: 1329 DFSRHKR 1335
>07_03_0507 -
18871260-18871361,18871444-18871560,18871792-18872120,
18872704-18872871,18873592-18873685,18873707-18873766,
18874702-18874762,18875258-18875319,18875729-18875856,
18876783-18876852,18877472-18877630
Length = 449
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +3
Query: 135 KCDYCHKLFVSKITMERHRQTHEGQPIDCQVKCTQCDRTMHST--LLRTHIARAHSSSLD 308
+C H++ K R + + QPIDC + T D T ++ ++ HS L
Sbjct: 371 RCFIPHQILPEKYCYHRKVEDNTNQPIDCVICMTTIDLTQRTSEYMVAPCEHIFHSGCLQ 430
Query: 309 DDVKRPYKCTTCGKS 353
+ +C TC +S
Sbjct: 431 RWMDIKMECPTCRRS 445
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 24.6 bits (51), Expect(2) = 1.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 45 KFKCSKCEDMLPTKNCLKIHMKKHTKVKN 131
K C+KC+ + N L HM H V N
Sbjct: 117 KHCCNKCDKSFRSGNALGGHMSCHRSVGN 145
Score = 23.8 bits (49), Expect(2) = 1.3
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = +3
Query: 135 KCDYCHKLFVSKITMERHRQTHEGQPI 215
+C C K+F + ++ H H G+ +
Sbjct: 179 QCQMCSKVFSTSGSLREHMMMHGGEKV 205
>03_04_0188 - 18241815-18242477
Length = 220
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/89 (25%), Positives = 33/89 (37%)
Frame = +3
Query: 132 FKCDYCHKLFVSKITMERHRQTHEGQPIDCQVKCTQCDRTMHSTLLRTHIARAHSSSLDD 311
F+C C K F S + H+ +H P L ++ S+S
Sbjct: 73 FRCTVCGKAFASYQALGGHKSSHRKPPSPGD---HYGAAAAAQQLASAGDSKEDSASSAA 129
Query: 312 DVKRPYKCTTCGKSFIVKINLNLHIRVCH 398
P++CT C +SF L H R CH
Sbjct: 130 GSTGPHRCTICRRSFATGQALGGHKR-CH 157
>02_05_0340 +
28105222-28105960,28106844-28106987,28107083-28107235,
28107418-28107533,28107819-28107986,28108792-28109016,
28110445-28110483,28110497-28110592
Length = 559
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 184 DIVRRMRDSRSTVKLNAHSVIELCTPHYCAH 276
D++RRM + R +L AH V LC P C H
Sbjct: 325 DLIRRMLNPRPKERLTAHEV--LCHPWICDH 353
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLF 161
+K H + KK+KC KC ++ K H K + ++CD C LF
Sbjct: 159 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAH-SKICGTREYRCD-CGTLF 207
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 19/125 (15%)
Frame = +3
Query: 78 PTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERHRQTH-------EGQPIDCQVK-- 230
P + + K F C+ C+K F + ++ HR+ H + P+ Q +
Sbjct: 77 PDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPLQAQRRRV 136
Query: 231 --CTQCDRTMHS--------TLLRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNL 380
C + H T ++ H R H ++ +KC C K + V+ +
Sbjct: 137 YLCPEPTCVHHDPSRALGDLTGIKKHFCRKHG-------EKKWKCDKCSKRYAVQSDWKA 189
Query: 381 HIRVC 395
H ++C
Sbjct: 190 HSKIC 194
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 9 LKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERH 188
+K H + KK+KC +C + K H K + +KCD C +F + + H
Sbjct: 151 IKKHFCRKHGEKKWKCDRCGKRYAVHSDWKAH-SKVCGTREYKCD-CGTVFSRRDSFVTH 208
Query: 189 R 191
R
Sbjct: 209 R 209
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 261 TLLRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLHIRVC 395
T ++ H R H ++ +KC CGK + V + H +VC
Sbjct: 149 TGIKKHFCRKHG-------EKKWKCDRCGKRYAVHSDWKAHSKVC 186
>02_05_0877 + 32403363-32404662,32406545-32406630,32406709-32407077,
32407174-32407257,32407362-32407784,32408368-32408434,
32409238-32409430,32409577-32409680,32409787-32409990,
32410174-32410427,32410511-32410735,32410812-32411033,
32411109-32411162,32411337-32411402,32411496-32411633,
32411979-32412032,32412334-32412393,32412975-32413340,
32413415-32413582
Length = 1478
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 6 YLKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMK-KHTKVKNFKCDYCH 152
++ + + N +KC CED+ P C+ T + +CD CH
Sbjct: 1107 HIGCYRNIENISGPWKCELCEDISPEDTCVGDQSDCNGTNLSLVQCDLCH 1156
>09_06_0259 - 21906612-21907109
Length = 165
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 132 FKCDYCHKLFVSKITMERHRQTHE 203
F C+YCH+ F S + H+ H+
Sbjct: 49 FSCNYCHRKFFSSQALGGHQNAHK 72
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 267 LRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLHIRVC 395
L+TH R H +P+ C CGK+F VK + H + C
Sbjct: 344 LQTHYKRKHGL-------KPFLCRKCGKAFAVKGDWRTHEKNC 379
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 267 LRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLHIRVC 395
L+TH R H +P+ C CGK+F VK + H + C
Sbjct: 339 LQTHYKRKHGL-------KPFLCRKCGKAFAVKGDWRTHEKNC 374
>03_05_0026 +
19966616-19966703,19967992-19968058,19968599-19968677,
19969140-19969231,19969961-19970396,19973749-19974099
Length = 370
Score = 29.1 bits (62), Expect = 2.3
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 18/131 (13%)
Frame = +3
Query: 33 NDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSK----ITMERHRQTH 200
ND+ K K + E+ P+K C+ + K K K+ K Y +L S+ I+ E+ ++ H
Sbjct: 221 NDMYKLKKKEMEEASPSKKCIALQAKVEDKGKS-KVLY-EELKTSRERLTISHEKLKEAH 278
Query: 201 E--------GQPIDCQVKCTQCDRTMHSTLLRTHIARAH-SSSLDDDVKRPYKCTT---- 341
+ G ID + C D + + H+A + S+S DD + P ++
Sbjct: 279 DNLLSTTQHGAHIDVGISCDLLDDSASCHI--PHVASSSISTSCDDLIYMPSSSSSSCVS 336
Query: 342 -CGKSFIVKIN 371
C S +V+ N
Sbjct: 337 ICDASLVVENN 347
>12_02_0903 - 24179533-24180120
Length = 195
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Frame = +3
Query: 87 NCLKIHMKKHTKV--KNFKCDYCHKLFVSKITMERHRQTHEGQPIDCQVKCTQCDRTMHS 260
NC + K + K F C++C + F S + H+ H+ + + R M
Sbjct: 55 NCSESEAPKPSSAPHKVFSCNFCMRKFFSSQALGGHQNAHKRER-SAAKRSYHAQRMMMG 113
Query: 261 TLLRTHIARAHS 296
L H A HS
Sbjct: 114 LPLEAHAAFVHS 125
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 264 LLRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLHIRVCH 398
+LR + A S+ DD + ++C TCG F ++ L++H CH
Sbjct: 876 MLRKYHAHVISTLFDD---QSHQCNTCGLRFSLEEELSVH-TACH 916
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 267 LRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLHIRVC 395
L+TH R H + +P++C C K F VK + H + C
Sbjct: 277 LQTHYKRKHGA-------KPFRCRRCAKPFAVKGDWRTHEKNC 312
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 39 VKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHK 155
V+K C C+ + L +H K K+FKC CHK
Sbjct: 8 VEKVFCYYCDREFDDEKILV----QHQKAKHFKCHVCHK 42
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = +3
Query: 30 HNDVKKFKCSKCEDMLPTK-----NCLKIHMKKHTKVKNFK 137
H K FKC C L T + L++H + TKV N K
Sbjct: 29 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAK 69
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 42 KKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLF 161
+K+ +K + ++ T + ++ +KH +C YC KLF
Sbjct: 268 QKYDFNKYDFVITTYSTIEADYRKHIMPPKTRCCYCDKLF 307
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 267 LRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLHIRVC 395
L+TH R H +P+ C CGK+F V+ + H + C
Sbjct: 299 LQTHYKRKHGI-------KPFMCRKCGKAFAVRGDWRTHEKNC 334
>11_03_0135 -
10547460-10547558,10547926-10548086,10548183-10548306,
10548566-10548729,10549803-10549883,10549973-10550097,
10550200-10550430,10550566-10550588,10551055-10551539,
10551678-10552075,10552903-10552988,10553120-10553397,
10553494-10553714,10553927-10554018,10554148-10554213,
10555855-10556022
Length = 933
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 54 CSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCH 152
CS+C D C+++ M++ K K + C+ CH
Sbjct: 294 CSRCNDGAEHIYCMRVMMQEVPKAK-WLCETCH 325
>03_02_0040 + 5221015-5221322,5221423-5222254
Length = 379
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 246 RTMHSTLLRTHIARAHSSSLDDDVKR-PYKCTTCGKSFIVKINLNLHIRVCH 398
+ + + + + +A A S+ D V R P+ CG F + ++ H+ CH
Sbjct: 158 QALRNVSVESELAAAALSAAGDQVARWPFYAYLCGAMFCLLMSSACHLLACH 209
>06_03_0925 -
25992699-25992836,25992920-25993033,25993199-25993310,
25993686-25993879,25994075-25994297,25994383-25994483,
25995108-25995137,25995182-25995337
Length = 355
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 12 KLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSK 170
K+ +++ + F C C + L K I++ + FKC C+K F SK
Sbjct: 65 KVPQSNNSEAEVFACPVCYEPLIRKGPSGINLPSIYR-SGFKCSKCNKSFTSK 116
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 267 LRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLHIRVC 395
L+TH R H + +P+ C C K F VK + H + C
Sbjct: 285 LQTHYKRKHGA-------KPFACRRCAKPFAVKGDWRTHEKNC 320
>06_03_1454 -
30261240-30261470,30261896-30262615,30262700-30262843,
30262953-30263204,30263542-30263751
Length = 518
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = +3
Query: 63 CEDMLPTKNCLKIHMKKHT-KVKNF---KCDY 146
C D LP K H KHT K NF CDY
Sbjct: 346 CRDKLPAPQIFKGHRNKHTMKGVNFLGPNCDY 377
>03_06_0607 + 35037467-35038624
Length = 385
Score = 27.1 bits (57), Expect = 9.3
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Frame = +3
Query: 75 LPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERHRQTHEGQP---IDCQVKCTQCD 245
L T C+K H ++ K+F C C+ S + R + H G+ C ++ D
Sbjct: 238 LKTPTCVKNHYRRSHCDKSFTCRRCNVKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKD 297
Query: 246 RTM-HSTLLRTHIARAHSSSLDDD 314
+ H + H DDD
Sbjct: 298 KLFAHVAIFDGHSPALPPEDYDDD 321
>03_05_0981 -
29391027-29391099,29391227-29391350,29391443-29391576,
29391814-29391895,29391955-29392012,29392344-29392418,
29392518-29392596,29393034-29393110,29393210-29393329
Length = 273
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/74 (24%), Positives = 26/74 (35%)
Frame = +3
Query: 147 CHKLFVSKITMERHRQTHEGQPIDCQVKCTQCDRTMHSTLLRTHIARAHSSSLDDDVKRP 326
C + + ++ TH G D + C R HS LR + ++ DV
Sbjct: 198 CGICYAKHLPIDDELGTHSGGTTDYTCENPSCSRAFHSVCLRDWLRAITTTRQSFDVLFG 257
Query: 327 YKCTTCGKSFIVKI 368
C C VKI
Sbjct: 258 -NCPYCSDPVAVKI 270
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,872,091
Number of Sequences: 37544
Number of extensions: 248799
Number of successful extensions: 710
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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