Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11o08
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000051AA1A Cluster: PREDICTED: similar to CG10221-PA...    47   4e-04
UniRef50_Q7PQT5 Cluster: ENSANGP00000014762; n=1; Anopheles gamb...    46   9e-04
UniRef50_Q177D3 Cluster: Putative uncharacterized protein; n=1; ...    45   0.002
UniRef50_UPI00015B608D Cluster: PREDICTED: similar to ENSANGP000...    42   0.011
UniRef50_UPI0000E47F13 Cluster: PREDICTED: similar to corticotro...    36   1.3  
UniRef50_Q14LD2 Cluster: Hypothetical pts system II component n-...    36   1.3  
UniRef50_Q6B8Z4 Cluster: Hypothetical plastid protein; n=1; Grac...    33   8.9  
UniRef50_A5K441 Cluster: Putative uncharacterized protein; n=2; ...    33   8.9  

>UniRef50_UPI000051AA1A Cluster: PREDICTED: similar to CG10221-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG10221-PA - Apis mellifera
          Length = 378

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
 Frame = +3

Query: 171 MWKYVSRRIRDTFERSVAQ-------FENRSTVGVVNXXXXXDEKSLCTPSRWFSSYKCL 329
           MWK+V+R IR+T ER V +        ++ ++   V      + K L      F+   C 
Sbjct: 1   MWKFVTRGIRETLERRVCRTNVYYQTSQDPNSKNEVKTSLICNHKFLPPTFSIFNKEFC- 59

Query: 330 SSCRNDGTNSK----RWNFEHRTWIDAITWSSGLIIGWYTSQLI 449
            S +  GT  K    +WN ++ TW +AI W+S L +GW   Q +
Sbjct: 60  GSTKTSGTKDKDHDSKWNTKY-TWSEAIGWTSVLAVGWVVCQTL 102


>UniRef50_Q7PQT5 Cluster: ENSANGP00000014762; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000014762 - Anopheles gambiae
           str. PEST
          Length = 449

 Score = 46.0 bits (104), Expect = 9e-04
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = +3

Query: 345 DGTNSKRWN---FEHRTWIDAITWSSGLIIGWYTSQLIHIKYKYHSNQYQKKC 494
           +GT  K +    FEH +W+ AITW+S +I GWYTSQL+ +  +     +  +C
Sbjct: 86  EGTRRKEYPQTPFEH-SWLGAITWTSAIICGWYTSQLLCLYRRTQPFDHPSRC 137



 Score = 34.7 bits (76), Expect = 2.2
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +3

Query: 171 MWKYVSRRIRDTFERSVAQFENRST 245
           MWKYVSRRIRD ++++    E R T
Sbjct: 1   MWKYVSRRIRDVYDKTAHVLEVRRT 25


>UniRef50_Q177D3 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 452

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +3

Query: 384 TWIDAITWSSGLIIGWYTSQLIHIKYKYHSNQYQKKCPTLSHIVNSL-RPYFICSINNGF 560
           +WI AITW+  +I GWYTSQLI +  + H  +  K  P L    + L R +      N F
Sbjct: 122 SWIGAITWTGAIICGWYTSQLICLNRRTHHWEGPKCLPYLISSTHKLPREFQTARFANCF 181

Query: 561 HQTSP 575
             ++P
Sbjct: 182 PFSAP 186


>UniRef50_UPI00015B608D Cluster: PREDICTED: similar to
           ENSANGP00000014762; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000014762 - Nasonia
           vitripennis
          Length = 407

 Score = 42.3 bits (95), Expect = 0.011
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
 Frame = +3

Query: 171 MWKYVSRRIRDTFERSVAQFENRSTVGVVNXXXXXDE--KSLCTPSRW----FSSY--KC 326
           MWK+V+R IR++ ER   +    S            E  K +C+  +     FS++   C
Sbjct: 1   MWKFVTRGIRESLERRACRTNVYSQTSQDGNGGNSTEQKKVICSDGKILTPKFSTFYHDC 60

Query: 327 LSSCRNDGTNSKRWNFEHR---TWIDAITWSSGLIIGWYTSQLIHIK 458
             + +  G   K +  ++    TW DA+ WSS L +G+   Q + I+
Sbjct: 61  CGNTKQSGAKDKEYQNKYDAKYTWTDAVGWSSVLAVGYVVCQSLCIR 107


>UniRef50_UPI0000E47F13 Cluster: PREDICTED: similar to
           corticotropin-releasing factor receptor type 2; n=1;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           corticotropin-releasing factor receptor type 2 -
           Strongylocentrotus purpuratus
          Length = 529

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -3

Query: 152 IYVYFKSI-CVHFHSEFNNIIAFAFLKLIYFLFVIVS 45
           I VYFKS+ CV  +   N + +F  L LI+FL +I+S
Sbjct: 297 ILVYFKSLRCVRNYIHLNLVTSFLLLYLIFFLMIIIS 333


>UniRef50_Q14LD2 Cluster: Hypothetical pts system II component
           n-terminal and c-terminal truncated transmembrane
           protein; n=1; Spiroplasma citri|Rep: Hypothetical pts
           system II component n-terminal and c-terminal truncated
           transmembrane protein - Spiroplasma citri
          Length = 183

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 16/43 (37%), Positives = 29/43 (67%)
 Frame = +3

Query: 396 AITWSSGLIIGWYTSQLIHIKYKYHSNQYQKKCPTLSHIVNSL 524
           A  W++G+  GW T+ +  I +++ SNQY+K+   +S I++SL
Sbjct: 29  ACFWAAGIGTGWTTTLVTWIGHRF-SNQYEKEADKMSWILSSL 70


>UniRef50_Q6B8Z4 Cluster: Hypothetical plastid protein; n=1;
           Gracilaria tenuistipitata var. liui|Rep: Hypothetical
           plastid protein - Gracilaria tenuistipitata var. liui
           (Red alga)
          Length = 149

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -3

Query: 155 NIYVYFKSICVHFHSEFNNIIAFAFLKLIYFLFVIVSI 42
           N Y+YF  IC +  S F++I+   FLK+++F+ +   +
Sbjct: 48  NDYLYFYQICNYNSSLFSSIMRKRFLKILFFIMMFYGL 85


>UniRef50_A5K441 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 5540

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 143  YFKSICVHFHSEFNNIIAFAFLKLIYFLFVIVSI 42
            +FKS C    + FN I+    LK+IY++ +IV +
Sbjct: 4410 HFKSNCNRCKNFFNEILLMVLLKMIYYIIIIVIV 4443


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,120,383
Number of Sequences: 1657284
Number of extensions: 11658403
Number of successful extensions: 29464
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29452
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)