Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11m22
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 274 3e-74
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 132 3e-31
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 124 4e-29
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 113 1e-25
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 109 2e-24
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 81 9e-16
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 41 0.001
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 29 2.2
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 29 2.2
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 29 2.2
Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H... 29 3.9
U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 274 bits (673), Expect = 3e-74
Identities = 126/203 (62%), Positives = 161/203 (79%)
Frame = +1
Query: 58 RYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRK 237
RYDRAIT+FSPDGHL QVEYAQEAV+KGSTA EKKS+ LQ++RT+RK
Sbjct: 3 RYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRK 62
Query: 238 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 417
I ++DDHV++AFAGL+ADAR+L++RA+IECQS+KLT+EDPVT+ YI+RYIA KQ++TQS
Sbjct: 63 IHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQS 122
Query: 418 NGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEV 597
GRRPFGIS LIGGFD+DG+P LF+TEPSG YYE+ ANATGR K VRE+LE+ Y+ +
Sbjct: 123 PGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENT 182
Query: 598 ATENGAVKLAIRALLEVVQSGQK 666
E +KL +++L +VV G +
Sbjct: 183 VDEATTLKLVVKSLAQVVPPGSQ 205
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 132 bits (318), Expect = 3e-31
Identities = 75/209 (35%), Positives = 119/209 (56%), Gaps = 4/209 (1%)
Frame = +1
Query: 40 FLTMSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQE 219
FLT S YDR + FSP+G L QVEYA EAV+ GST+ EK+S +KL
Sbjct: 2 FLTRS-EYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMV 60
Query: 220 ERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLK 399
+ KI +D H+ + FAGL AD+R L+ RAQIE Q+ T + +E +T+ +A L
Sbjct: 61 NDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLA 120
Query: 400 QKY----TQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREF 567
++ +++ RPFG++ L G D +G+ LF +PSG + + KA + G ++ +
Sbjct: 121 LQFGDDDVKASMSRPFGVAMLFAGVDQEGA-KLFHLDPSGTFIDCKAKSIGAASDGAEQN 179
Query: 568 LEKNYTADEVATENGAVKLAIRALLEVVQ 654
L++ Y D + + G +K+A+ L +V++
Sbjct: 180 LKEQY-HDALTIKEG-LKMALAILKQVME 206
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 124 bits (300), Expect = 4e-29
Identities = 69/198 (34%), Positives = 107/198 (54%), Gaps = 1/198 (0%)
Frame = +1
Query: 49 MSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERT 228
M+ RYD T+FSP+G L QVEYA EA+ T E+K+V KL ++
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSV 60
Query: 229 V-RKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQK 405
+ K+ L D++ AG+TADA ILIN + S++ + + + +E + + + KQ+
Sbjct: 61 MTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQR 120
Query: 406 YTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYT 585
YTQ G+RPFG+S L G+D L+Q++PSG Y WKA G + + L++ Y
Sbjct: 121 YTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYK 180
Query: 586 ADEVATENGAVKLAIRAL 639
+ + A +LAI+ L
Sbjct: 181 SPNL---EEAKQLAIKVL 195
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 113 bits (271), Expect = 1e-25
Identities = 64/181 (35%), Positives = 97/181 (53%), Gaps = 2/181 (1%)
Frame = +1
Query: 49 MSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERT 228
M Y ++T FSP G L+Q+EYA AV+ G + E ++
Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVGSVLTDDQPK 60
Query: 229 VRKICLLDDHVVMAFAGLTADARILINRAQ-IECQSHKLTVEDPVTLEYITRYIAGLKQK 405
V +I H+ ++G+ D RIL+ +A+ I + + E+ T++ +T IA + Q+
Sbjct: 61 VEQI---SKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTD-IAAVMQE 116
Query: 406 YTQSNGRRPFGISCLIGGFDYD-GSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNY 582
YTQS G RPFG S LI G+D + G P LFQ +PSG Y+ WKA A G++ + FLEK +
Sbjct: 117 YTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRF 176
Query: 583 T 585
+
Sbjct: 177 S 177
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 109 bits (262), Expect = 2e-24
Identities = 64/198 (32%), Positives = 101/198 (51%)
Frame = +1
Query: 58 RYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRK 237
+YD +TV+SP G L QVEYA EA+++GS K++ L + +K
Sbjct: 5 QYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ--KK 62
Query: 238 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 417
+ +D H ++ AGL +D RIL Q EC S + + V ++ + + Q TQ
Sbjct: 63 VYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQY 122
Query: 418 NGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEV 597
GRRPFG+ LI G+D DG+ H+ QT+PS + G +++ R +LE+N E
Sbjct: 123 YGRRPFGVGILIAGYDKDGA-HIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEK 181
Query: 598 ATENGAVKLAIRALLEVV 651
+T + A+ AL + +
Sbjct: 182 STPEQLIVHALLALRDTL 199
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 93.1 bits (221), Expect = 2e-19
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Frame = +1
Query: 52 SARYDRAITVFSPDGHLLQVEYAQEAVRKGS-TAXXXXXXXXXXXXXEKKSVAKLQEERT 228
SA +DR IT+FSP+G + QVEYA +A+ + TA +K+ L T
Sbjct: 6 SAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADT 65
Query: 229 VRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY 408
V + + V G+ DA+ I RAQ E S K + E + + +A L Q Y
Sbjct: 66 VTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYY 125
Query: 409 TQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTA 588
TQ+ R G + L +D + P +++ +P+G Y K + G FLEK
Sbjct: 126 TQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKK 185
Query: 589 DEVATENGAVKLAIRAL 639
T A++LAI AL
Sbjct: 186 KSELTSTEAIELAIEAL 202
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 80.6 bits (190), Expect = 9e-16
Identities = 59/196 (30%), Positives = 87/196 (44%)
Frame = +1
Query: 61 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKI 240
YD A + FSPDG + QVEYAQ+AV T +K +KL + ++
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRM 67
Query: 241 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSN 420
++D+V +A AG D L N A E +P+ ++ I +A +T
Sbjct: 68 FNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLGI 127
Query: 421 GRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVA 600
RPFG ++ LF EPSG+ YE+KA A G+ + + +EK E
Sbjct: 128 S-RPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEK--LKIEEL 184
Query: 601 TENGAVKLAIRALLEV 648
N VK A R ++ V
Sbjct: 185 DVNQLVKEAARIIMVV 200
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 40.7 bits (91), Expect = 0.001
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 1/169 (0%)
Frame = +1
Query: 115 YAQEAVRKGSTAXXXXXXXXXXXXXEKK-SVAKLQEERTVRKICLLDDHVVMAFAGLTAD 291
Y QE + G+T + + S R KI + D++V+ +G AD
Sbjct: 15 YPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAAD 74
Query: 292 ARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLIGGFDYD 471
+ + + A+ + +T PVT+ ++ Y R S L+ G+D +
Sbjct: 75 TQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNY-----REQLSASVLVAGWDEE 129
Query: 472 GSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAV 618
++ G ++ A+G + V+ FL+ + + E A+
Sbjct: 130 LGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAI 178
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 349 EDPVTLEYITRY---IAGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEP-SGIYY 516
++P+T E++TRY + Q +T SNGR+ + FD S TEP +G YY
Sbjct: 689 KNPITKEFVTRYTTEVHSKNQSFTDSNGRQ-----AMERFFDGATSFEYSDTEPIAGNYY 743
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/117 (17%), Positives = 48/117 (41%)
Frame = +1
Query: 223 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 402
R KI +L+D++++ +G D L Q ++ ++++ ++ +
Sbjct: 81 RDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS--RN 138
Query: 403 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLE 573
Y + P+ ++ G D G +F +P G +A+G + + FL+
Sbjct: 139 LYYRRFF--PYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/117 (17%), Positives = 48/117 (41%)
Frame = +1
Query: 223 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 402
R KI +L+D++++ +G D L Q ++ ++++ ++ +
Sbjct: 81 RDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS--RN 138
Query: 403 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLE 573
Y + P+ ++ G D G +F +P G +A+G + + FL+
Sbjct: 139 LYYRRFF--PYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193
>Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical
protein K09C8.1 protein.
Length = 783
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 544 SAKTVREFLEKNYTADEVATENGAVKL 624
S K VR LEKNYTA++ E V+L
Sbjct: 568 SKKYVRPLLEKNYTANKAKKEGKLVEL 594
>AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H
exchanger isoform 7 protein.
Length = 783
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 544 SAKTVREFLEKNYTADEVATENGAVKL 624
S K VR LEKNYTA++ E V+L
Sbjct: 568 SKKYVRPLLEKNYTANKAKKEGKLVEL 594
>U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical
protein C56G2.1a protein.
Length = 867
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +1
Query: 508 IYYEWKANATGRSAKTVREF----LEKNYTADEVATENGAVKLA 627
++Y K + GR K V + L K TA +V TENG VK A
Sbjct: 124 VWYINKKDKDGRKKKKVGDVISNGLPKTATASDVQTENGNVKKA 167
>Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical
protein T15D6.11 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -1
Query: 540 TSCISFPFIIYT--RRFSLEQVW*TIIVESSYQTRNT 436
+SCI F F++YT RF + VW T+ E YQ + T
Sbjct: 19 SSCIVFGFVLYTFAPRFHTKIVWDTLDGE-GYQFKET 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,022,445
Number of Sequences: 27780
Number of extensions: 319262
Number of successful extensions: 778
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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