Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11m21
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007306-1|AAP35970.1| 174|Homo sapiens eukaryotic translation ... 46 1e-04
BC005291-1|AAH05291.1| 174|Homo sapiens eukaryotic translation ... 46 1e-04
AL451187-1|CAI14747.1| 174|Homo sapiens eukaryotic translation ... 46 1e-04
AL355499-1|CAH72539.1| 174|Homo sapiens eukaryotic translation ... 46 1e-04
AL023694-1|CAI21644.1| 174|Homo sapiens eukaryotic translation ... 46 1e-04
AB011079-1|BAA24926.1| 174|Homo sapiens p18 component of aminoa... 46 1e-04
U24169-1|AAC50391.1| 312|Homo sapiens JTV-1 protein. 30 8.3
BC013630-1|AAH13630.1| 320|Homo sapiens JTV1 gene protein. 30 8.3
BC010156-1|AAH10156.1| 320|Homo sapiens JTV1 gene protein. 30 8.3
BC002853-1|AAH02853.1| 320|Homo sapiens JTV1 gene protein. 30 8.3
AC005995-2|AAS00389.1| 320|Homo sapiens unknown protein. 30 8.3
>BT007306-1|AAP35970.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Frame = +1
Query: 292 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 450
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 451 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIX 627
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 628 YPLLEHMSV 654
+ + ++V
Sbjct: 125 HRFIVDLTV 133
>BC005291-1|AAH05291.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Frame = +1
Query: 292 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 450
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 451 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIX 627
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 628 YPLLEHMSV 654
+ + ++V
Sbjct: 125 HRFIVDLTV 133
>AL451187-1|CAI14747.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Frame = +1
Query: 292 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 450
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 451 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIX 627
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 628 YPLLEHMSV 654
+ + ++V
Sbjct: 125 HRFIVDLTV 133
>AL355499-1|CAH72539.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Frame = +1
Query: 292 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 450
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 451 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIX 627
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 628 YPLLEHMSV 654
+ + ++V
Sbjct: 125 HRFIVDLTV 133
>AL023694-1|CAI21644.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Frame = +1
Query: 292 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 450
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 451 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIX 627
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 628 YPLLEHMSV 654
+ + ++V
Sbjct: 125 HRFIVDLTV 133
>AB011079-1|BAA24926.1| 174|Homo sapiens p18 component of
aminoacyl-tRNA synthetase complex protein.
Length = 174
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Frame = +1
Query: 292 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 450
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 451 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIX 627
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 628 YPLLEHMSV 654
+ + ++V
Sbjct: 125 HRFIVDLTV 133
>U24169-1|AAC50391.1| 312|Homo sapiens JTV-1 protein.
Length = 312
Score = 29.9 bits (64), Expect = 8.3
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 385 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 564
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 565 SNTYLTGQFLTIADVALYYI 624
+ +L G LT+ADV L+ +
Sbjct: 265 KSPWLAGNELTVADVVLWSV 284
>BC013630-1|AAH13630.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 29.9 bits (64), Expect = 8.3
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 385 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 564
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 565 SNTYLTGQFLTIADVALYYI 624
+ +L G LT+ADV L+ +
Sbjct: 265 KSPWLAGNELTVADVVLWSV 284
>BC010156-1|AAH10156.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 29.9 bits (64), Expect = 8.3
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 385 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 564
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 565 SNTYLTGQFLTIADVALYYI 624
+ +L G LT+ADV L+ +
Sbjct: 265 KSPWLAGNELTVADVVLWSV 284
>BC002853-1|AAH02853.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 29.9 bits (64), Expect = 8.3
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 385 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 564
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 565 SNTYLTGQFLTIADVALYYI 624
+ +L G LT+ADV L+ +
Sbjct: 265 KSPWLAGNELTVADVVLWSV 284
>AC005995-2|AAS00389.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 29.9 bits (64), Expect = 8.3
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 385 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 564
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 565 SNTYLTGQFLTIADVALYYI 624
+ +L G LT+ADV L+ +
Sbjct: 265 KSPWLAGNELTVADVVLWSV 284
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,451,940
Number of Sequences: 237096
Number of extensions: 1667003
Number of successful extensions: 5857
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5851
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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