Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11m19
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical p... 320 6e-88
Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical p... 320 6e-88
U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein. 320 6e-88
AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical ... 30 1.3
U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF024499-6|AAB70354.1| 560|Caenorhabditis elegans Hypothetical ... 29 3.9
M11498-1|AAA28163.1| 282|Caenorhabditis elegans protein ( C.ele... 28 5.1
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 28 5.1
AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin ... 28 5.1
Z81581-16|CAI46620.1| 656|Caenorhabditis elegans Hypothetical p... 27 9.0
Z81581-15|CAI46619.1| 729|Caenorhabditis elegans Hypothetical p... 27 9.0
Z81553-7|CAB04496.4| 797|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z81143-11|CAI46592.1| 656|Caenorhabditis elegans Hypothetical p... 27 9.0
Z81143-10|CAB03514.2| 729|Caenorhabditis elegans Hypothetical p... 27 9.0
DQ372920-1|ABD16184.1| 729|Caenorhabditis elegans Krev interact... 27 9.0
>Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical
protein Y57G11C.10b protein.
Length = 459
Score = 320 bits (786), Expect = 6e-88
Identities = 149/202 (73%), Positives = 166/202 (82%), Gaps = 2/202 (0%)
Frame = +1
Query: 55 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 234
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPLE+L+ KF+ P
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKFHGPQ 60
Query: 235 --PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 408
P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIE S+V KGGKI KV
Sbjct: 61 AKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKV 120
Query: 409 PVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLDR 588
P D+ EALA+ LMGMFEKRRF+ FL++VQ F E TW+ DP + MQ +Y+KFGLD
Sbjct: 121 PADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFGLDE 180
Query: 589 NTQDFTGHALALYLDDNYLQQP 654
NT DFTGHALALY DD + QP
Sbjct: 181 NTADFTGHALALYRDDEHKNQP 202
>Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.10a protein.
Length = 444
Score = 320 bits (786), Expect = 6e-88
Identities = 149/202 (73%), Positives = 166/202 (82%), Gaps = 2/202 (0%)
Frame = +1
Query: 55 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 234
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPLE+L+ KF+ P
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKFHGPQ 60
Query: 235 --PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 408
P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIE S+V KGGKI KV
Sbjct: 61 AKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKV 120
Query: 409 PVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLDR 588
P D+ EALA+ LMGMFEKRRF+ FL++VQ F E TW+ DP + MQ +Y+KFGLD
Sbjct: 121 PADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFGLDE 180
Query: 589 NTQDFTGHALALYLDDNYLQQP 654
NT DFTGHALALY DD + QP
Sbjct: 181 NTADFTGHALALYRDDEHKNQP 202
>U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein.
Length = 444
Score = 320 bits (786), Expect = 6e-88
Identities = 149/202 (73%), Positives = 166/202 (82%), Gaps = 2/202 (0%)
Frame = +1
Query: 55 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 234
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPLE+L+ KF+ P
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKFHGPQ 60
Query: 235 --PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 408
P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIE S+V KGGKI KV
Sbjct: 61 AKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKV 120
Query: 409 PVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLDR 588
P D+ EALA+ LMGMFEKRRF+ FL++VQ F E TW+ DP + MQ +Y+KFGLD
Sbjct: 121 PADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFGLDE 180
Query: 589 NTQDFTGHALALYLDDNYLQQP 654
NT DFTGHALALY DD + QP
Sbjct: 181 NTADFTGHALALYRDDEHKNQP 202
>AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical
protein Y67D2.1b protein.
Length = 353
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 55 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 195
+ E DV+VLGTGL E IL+ + +G VLH+DRN+YYGG+ +S T
Sbjct: 5 LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFT 51
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Frame = +1
Query: 259 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYV-----YKGGKISKVPVDQK 423
R +++DL+PK L++ G +V+ L + V+ Y EFK + G ++ VP +
Sbjct: 122 RRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKG 181
Query: 424 EALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTAN--MQSLYDKFGLDRNTQ 597
E S+ + + EKR F+ + + +D + + A+ ++ G+ + Q
Sbjct: 182 EIFQSNALSILEKRALMKFITFCTQWSTKDTEEGRKLLAEHADRPFSEFLEQMGVGKTLQ 241
Query: 598 DF 603
F
Sbjct: 242 SF 243
>AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical
protein Y67D2.1a protein.
Length = 510
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 55 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 195
+ E DV+VLGTGL E IL+ + +G VLH+DRN+YYGG+ +S T
Sbjct: 5 LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFT 51
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Frame = +1
Query: 259 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYV-----YKGGKISKVPVDQK 423
R +++DL+PK L++ G +V+ L + V+ Y EFK + G ++ VP +
Sbjct: 122 RRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKG 181
Query: 424 EALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTAN--MQSLYDKFGLDRNTQ 597
E S+ + + EKR F+ + + +D + + A+ ++ G+ + Q
Sbjct: 182 EIFQSNALSILEKRALMKFITFCTQWSTKDTEEGRKLLAEHADRPFSEFLEQMGVGKTLQ 241
Query: 598 DF 603
F
Sbjct: 242 SF 243
>AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical
protein F37C4.6 protein.
Length = 544
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 61 EEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 189
+ YD I++G G + L+ +GKKV ++R GG + +
Sbjct: 13 QSYDAIIIGGGHNGLTAAAYLTKAGKKVCVLERRHVVGGAAVT 55
>U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical
protein ZC196.3 protein.
Length = 441
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 415 DQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDP-STANMQSLYDKFGL 582
++KE +D + K+ + FL Y +DFQ A+ WK F + ++Q Y++ +
Sbjct: 253 EEKEEKVADWIQNCYKQPIKRFLEYFRDFQNV-AREWKYFKRLPSESLQDAYEEISI 308
>AF024499-6|AAB70354.1| 560|Caenorhabditis elegans Hypothetical
protein F42G2.2 protein.
Length = 560
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 644 K*LSSK*RARACPVKSWVFLSNPNLSYSD 558
K L++K R C + +W ++ +P+ SYSD
Sbjct: 269 KVLNNKRELRRCTMGNWFYIVHPDYSYSD 297
>M11498-1|AAA28163.1| 282|Caenorhabditis elegans protein (
C.elegans vitellogenin4 (yp170A) gene. ).
Length = 282
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Frame = +1
Query: 343 RYLEFKSIE----GSYVYKGGKISKVPVDQKEALASDLMGMFE---KRRFRNFLIYVQDF 501
RY+ + I+ S++ + + K+ ++ L+ +L + E + + RN L+ F
Sbjct: 66 RYIHLQLIDIQYSASHIPQSEQWPKIESLEQRELSDELKELLELPFRAQIRNGLVSEIQF 125
Query: 502 QEEDAKTWKDFDPSTANMQSLYDKFGLDRNTQD 600
EDA+ K+ S N+ SL +D +QD
Sbjct: 126 SSEDAEWSKNAKRSILNLFSLRKSAPVDEMSQD 158
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Frame = +1
Query: 343 RYLEFKSIE----GSYVYKGGKISKVPVDQKEALASDLMGMFE---KRRFRNFLIYVQDF 501
RY+ + I+ S++ + + K+ ++ L+ +L + E + + RN L+ F
Sbjct: 66 RYIHLQLIDIQYSASHIPQSEQWPKIKSLEQRELSDELKELLELPFRAQIRNGLVSEIQF 125
Query: 502 QEEDAKTWKDFDPSTANMQSLYDKFGLDRNTQD 600
EDA+ K+ S N+ SL +D +QD
Sbjct: 126 SSEDAEWSKNAKRSILNLFSLRKSAPVDEMSQD 158
>AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 4 protein.
Length = 1603
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Frame = +1
Query: 343 RYLEFKSIE----GSYVYKGGKISKVPVDQKEALASDLMGMFE---KRRFRNFLIYVQDF 501
RY+ + I+ S++ + + K+ ++ L+ +L + E + + RN L+ F
Sbjct: 66 RYIHLQLIDIQYSASHIPQSEQWPKIESLEQRELSDELKELLELPFRAQIRNGLVSEIQF 125
Query: 502 QEEDAKTWKDFDPSTANMQSLYDKFGLDRNTQD 600
EDA+ K+ S N+ SL +D +QD
Sbjct: 126 SSEDAEWSKNAKRSILNLFSLRKSAPVDEMSQD 158
>Z81581-16|CAI46620.1| 656|Caenorhabditis elegans Hypothetical
protein ZK265.1b protein.
Length = 656
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 526 KDFDPSTANMQSLYDKFGLDRNTQDFTGHALALYLDDNYLQ 648
+DF PS+ N+ +LY ++ LD + + L L N Q
Sbjct: 581 RDFKPSSKNLSNLYPQYMLDNHDRGKLADRLKAQLRKNETQ 621
>Z81581-15|CAI46619.1| 729|Caenorhabditis elegans Hypothetical
protein ZK265.1a protein.
Length = 729
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 526 KDFDPSTANMQSLYDKFGLDRNTQDFTGHALALYLDDNYLQ 648
+DF PS+ N+ +LY ++ LD + + L L N Q
Sbjct: 581 RDFKPSSKNLSNLYPQYMLDNHDRGKLADRLKAQLRKNETQ 621
>Z81553-7|CAB04496.4| 797|Caenorhabditis elegans Hypothetical
protein F56H6.7 protein.
Length = 797
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 408 YFGDFSTFVNITSFDGLKLQVPGDARVNKQFD*QSISHQKLRNQVNVPVS 259
YFGD + N T + L Q P ++ KQ + QK +N V + V+
Sbjct: 456 YFGDIVDWCNETGYSNLSNQFPSATQLAKQHG-DTYVFQKDQNSVLIAVN 504
>Z81143-11|CAI46592.1| 656|Caenorhabditis elegans Hypothetical
protein ZK265.1b protein.
Length = 656
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 526 KDFDPSTANMQSLYDKFGLDRNTQDFTGHALALYLDDNYLQ 648
+DF PS+ N+ +LY ++ LD + + L L N Q
Sbjct: 581 RDFKPSSKNLSNLYPQYMLDNHDRGKLADRLKAQLRKNETQ 621
>Z81143-10|CAB03514.2| 729|Caenorhabditis elegans Hypothetical
protein ZK265.1a protein.
Length = 729
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 526 KDFDPSTANMQSLYDKFGLDRNTQDFTGHALALYLDDNYLQ 648
+DF PS+ N+ +LY ++ LD + + L L N Q
Sbjct: 581 RDFKPSSKNLSNLYPQYMLDNHDRGKLADRLKAQLRKNETQ 621
>DQ372920-1|ABD16184.1| 729|Caenorhabditis elegans Krev interaction
trapped/cerebralcavernous malformation 1 isoform a
protein.
Length = 729
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 526 KDFDPSTANMQSLYDKFGLDRNTQDFTGHALALYLDDNYLQ 648
+DF PS+ N+ +LY ++ LD + + L L N Q
Sbjct: 581 RDFKPSSKNLSNLYPQYMLDNHDRGKLADRLKAQLRKNETQ 621
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,932,454
Number of Sequences: 27780
Number of extensions: 349814
Number of successful extensions: 957
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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