Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11m05
         (343 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p pro...    89   1e-18
AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA...    89   1e-18
AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-P...    84   5e-17
BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p pro...    51   5e-07

>AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p
           protein.
          Length = 65

 Score = 89.4 bits (212), Expect = 1e-18
 Identities = 41/46 (89%), Positives = 45/46 (97%)
 Frame = +3

Query: 27  ARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 164
           ARV+KVLGRTGSQGQCTQVKVEF+GE +RQIIRNVKGPVR+GDILT
Sbjct: 8   ARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILT 53


>AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA
           protein.
          Length = 65

 Score = 89.4 bits (212), Expect = 1e-18
 Identities = 41/46 (89%), Positives = 45/46 (97%)
 Frame = +3

Query: 27  ARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 164
           ARV+KVLGRTGSQGQCTQVKVEF+GE +RQIIRNVKGPVR+GDILT
Sbjct: 8   ARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILT 53


>AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-PA
           protein.
          Length = 64

 Score = 83.8 bits (198), Expect = 5e-17
 Identities = 38/46 (82%), Positives = 44/46 (95%)
 Frame = +3

Query: 27  ARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 164
           ARVV++LGRTGSQGQCTQV+VEF+G+ SRQIIRNVKGPVR GDIL+
Sbjct: 7   ARVVEILGRTGSQGQCTQVRVEFLGDQSRQIIRNVKGPVRVGDILS 52


>BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p
           protein.
          Length = 73

 Score = 50.8 bits (116), Expect = 5e-07
 Identities = 21/44 (47%), Positives = 32/44 (72%)
 Frame = +3

Query: 27  ARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDI 158
           ARV+K+L R G++G  T+V+V+ + +   Q +R VKGPVR GD+
Sbjct: 7   ARVIKILNRIGARGILTEVRVQLVDQPKMQFMRTVKGPVRLGDV 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,500,053
Number of Sequences: 53049
Number of extensions: 245954
Number of successful extensions: 672
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)