Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11m01
(669 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 27 0.21
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 27 0.21
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 26 0.28
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 25 0.49
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 24 1.5
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 2.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 4.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 8.0
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.21
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 106 NKILSSCSI-FKYFNEIIKRLMCNHYVFMYLTTKLI 2
+KI+SS S + Y N K+L CN+Y +Y I
Sbjct: 79 HKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYI 114
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.21
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 106 NKILSSCSI-FKYFNEIIKRLMCNHYVFMYLTTKLI 2
+KI+SS S + Y N K+L CN+Y +Y I
Sbjct: 79 HKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYI 114
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.28
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 106 NKILSSCSI-FKYFNEIIKRLMCNHYVFMYLTTKLI 2
+KI+SS S + Y N K+L CN+Y +Y I
Sbjct: 79 HKIISSLSNNYNYNNNNYKKLYCNNYRKLYYNINYI 114
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.4 bits (53), Expect = 0.49
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 100 ILSSCSIFKYFNEIIKRLMCNHYVFM 23
+LS+CS YF E++K C H V +
Sbjct: 49 VLSACS--PYFRELLKSTPCKHPVIV 72
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +1
Query: 148 FLSISLKKRTFLSNDYKCNENWNSAISSPLLNKINLN 258
++ ++KK +F+ D NE+ + I+ LN+ +N
Sbjct: 62 YIECAMKKFSFVDKDGNFNEHVSREIAKIFLNENEIN 98
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.0 bits (47), Expect = 2.6
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 351 WFCNSVSEYVYVY 313
W C+ EY YVY
Sbjct: 558 WVCDQCEEYEYVY 570
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 181 LSNDYKCNENWNSAISSPLLNKINLNDFYNKLD 279
LSN+Y N N+N+ NK N N Y ++
Sbjct: 88 LSNNYNYNNNYNN------YNKHNYNKLYYNIN 114
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 181 LSNDYKCNENWNSAISSPLLNKINLNDFYNKLD 279
LSN+Y N N+N+ NK N N Y ++
Sbjct: 88 LSNNYNYNNNYNN------YNKHNYNKLYYNIN 114
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 181 LSNDYKCNENWNSAISSPLLNKINLNDFYNKLD 279
LSN+Y N N+N+ NK N N Y ++
Sbjct: 88 LSNNYNYNNNYNN------YNKHNYNKLYYNIN 114
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 181 LSNDYKCNENWNSAISSPLLNKINLNDFYNKLD 279
LSN+Y N N+N+ NK N N Y ++
Sbjct: 88 LSNNYNYNNNYNN------YNKHNYNKLYYNIN 114
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 181 LSNDYKCNENWNSAISSPLLNKINLNDFYNKLD 279
LSN+Y N N+N+ NK N N Y ++
Sbjct: 88 LSNNYNYNNNYNN------YNKHNYNKLYYNIN 114
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 181 LSNDYKCNENWNSAISSPLLNKINLNDFYNKLD 279
LSN+Y N N+N+ NK N N Y ++
Sbjct: 88 LSNNYNYNNNYNN------YNKHNYNKLYYNIN 114
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 181 LSNDYKCNENWNSAISSPLLNKINLNDFYNKLD 279
LSN+Y N N+N+ NK N N Y ++
Sbjct: 88 LSNNYNYNNNYNN------YNKHNYNKLYYNIN 114
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 181 LSNDYKCNENWNSAISSPLLNKINLNDFYNKLD 279
LSN+Y N N+N+ NK N N Y ++
Sbjct: 88 LSNNYNYNNNYNN------YNKHNYNKLYYNIN 114
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 181 LSNDYKCNENWNSAISSPLLNKINLNDFYNKLD 279
LSN+Y N N+N+ NK N N Y ++
Sbjct: 88 LSNNYNYNNNYNN------YNKHNYNKLYYNIN 114
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 181 LSNDYKCNENWNSAISSPLLNKINLNDFYNKLD 279
LSN+Y N N+N+ NK N N Y ++
Sbjct: 321 LSNNYNYNNNYNN------YNKHNYNKLYYNIN 347
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 181 LSNDYKCNENWNSAISSPLLNKINLNDFYNKLD 279
LSN+Y N N+N+ NK N N Y ++
Sbjct: 321 LSNNYNYNNNYNN------YNKHNYNKLYYNIN 347
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 8.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 217 NSNFRYIYNHY 185
N+N++Y YN+Y
Sbjct: 326 NNNYKYNYNNY 336
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,314
Number of Sequences: 438
Number of extensions: 2538
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -