Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11l14
(620 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 66 4e-12
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 55 1e-08
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 50 4e-07
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 49 5e-07
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 48 1e-06
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 47 3e-06
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 45 1e-05
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 43 3e-05
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 42 5e-05
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 41 1e-04
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 40 3e-04
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 40 3e-04
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 39 5e-04
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 39 5e-04
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 37 0.002
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 33 0.033
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 32 0.077
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 30 0.23
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 29 0.72
SPCC1620.11 |mug87||nucleoporin Nic96 homolog|Schizosaccharomyce... 26 5.1
SPBC1198.02 |dea2||adenine deaminase Dea2|Schizosaccharomyces po... 25 6.7
SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyce... 25 8.8
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 25 8.8
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 25 8.8
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 66.1 bits (154), Expect = 4e-12
Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
Frame = +3
Query: 219 STLRGKVVLITGASSGIGEALA-HVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTL 395
S L GK +LITGASSGIG++ A + K+ILA+RR +E + ++L S K + L
Sbjct: 2 SRLDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELES-KYEVSVL 60
Query: 396 EPVVLELNLADIDNMYLFVEKVYGICGHVDILVNNGGVT-HRGSILNTKTDVDQKIMFIN 572
L+L+++D+ ++ +E + +D+L+NN G+ +++ D ++ N
Sbjct: 61 P---LKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTN 117
Query: 573 YFGSVALTKAVLP 611
G +A+T+AVLP
Sbjct: 118 VLGMMAMTRAVLP 130
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 54.8 bits (126), Expect = 1e-08
Identities = 39/131 (29%), Positives = 64/131 (48%)
Frame = +3
Query: 225 LRGKVVLITGASSGIGEALAHVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEPV 404
L GKV L+TG+S GIG A +G K+ LA R + + ++V + + ++ +
Sbjct: 40 LTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDE---VRHSKIR 96
Query: 405 VLELNLADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKTDVDQKIMFINYFGS 584
L L+L D +++Y E + ILVNN G+ + L TK + +I NY
Sbjct: 97 FLRLDLLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFEL-TKDGYELQIQ-TNYLSH 154
Query: 585 VALTKAVLPKM 617
T+ +LP +
Sbjct: 155 YLFTELLLPTL 165
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 49.6 bits (113), Expect = 4e-07
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Frame = +3
Query: 234 KVVLITGASSG-IGEALAHVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEPVVL 410
K VLITG S G IG ALA F+ +G +++ +R+ ++ + K +QTL+
Sbjct: 5 KFVLITGCSEGGIGNALALKFHQEGFQVLATARQVERMDNLT------KAGLQTLK---- 54
Query: 411 ELNLADIDNMYLFVEKVYGIC-GHVDILVNNGGVTHRGSILNTKTDVDQKIMFINYFGSV 587
L++ D D++ ++V G + L+NN G ++ + K+M +N++G +
Sbjct: 55 -LDVTDEDSVREVEQEVRKFTNGSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYGVI 113
Query: 588 ALTKAVLPKMI 620
+ KA ++I
Sbjct: 114 RMNKAFQHQLI 124
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 49.2 bits (112), Expect = 5e-07
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Frame = +3
Query: 228 RGKVVLITGASSGIGEALAHVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEPVV 407
+G ++TGA+ GIG+ A G ++L SR + +L+ + ++L VA +
Sbjct: 56 KGYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKEL--ETVAKVKTRTIA 113
Query: 408 LELNLADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKTDVDQ--KIMFINYFG 581
++ + + + G + +L+NN G +H +T V + IM IN FG
Sbjct: 114 IDYTKTTAETFEKLHQDLVGT--PITVLINNVGQSHYMPTSFAETTVKEMDDIMHINCFG 171
Query: 582 SVALTKAVLPKMI 620
++ TKAVL M+
Sbjct: 172 TLHTTKAVLSIML 184
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 48.0 bits (109), Expect = 1e-06
Identities = 31/117 (26%), Positives = 60/117 (51%)
Frame = +3
Query: 222 TLRGKVVLITGASSGIGEALAHVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEP 401
+L+GK ++ GA+ GIG ++A F G +I+ E+ K+ V + TL+
Sbjct: 18 SLKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHTLK- 76
Query: 402 VVLELNLADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKTDVDQKIMFIN 572
++++ D + VE++ I + ++V N G+ R S+L++ +K+M IN
Sbjct: 77 ----IDISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHEFEKVMNIN 129
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 46.8 bits (106), Expect = 3e-06
Identities = 37/126 (29%), Positives = 61/126 (48%)
Frame = +3
Query: 240 VLITGASSGIGEALAHVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEPVVLELN 419
VLITG+S G+G AL V QG +I SR D I+ I+ + + L+L+
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIACSR--------APDTIT----IEHSKLLKLKLD 55
Query: 420 LADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKTDVDQKIMFINYFGSVALTK 599
+ D+ ++ + G+VDI++NN G G + + + M +N++G +TK
Sbjct: 56 VTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITK 115
Query: 600 AVLPKM 617
L M
Sbjct: 116 EALNLM 121
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 44.8 bits (101), Expect = 1e-05
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Frame = +3
Query: 222 TLRGKVVLITGASSGIGEALAHVFYGQGCKI-ILASRRKRELERVKQDLISRKVAIQT-L 395
+L+GK LITG S GIG ++A F G + +L R K+ LE + + K +Q
Sbjct: 6 SLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAE--LRDKHGVQAKA 63
Query: 396 EPVVLELNLADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKT-DVDQKIMFIN 572
+E A I+ VE+ + G +D+++ N G+ L K D+ K++ IN
Sbjct: 64 YSCPIENRSAVIETTNQAVEE---LGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGIN 120
Query: 573 YFGSVALTKA 602
G+ +A
Sbjct: 121 LNGAYYTAQA 130
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 43.2 bits (97), Expect = 3e-05
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = +3
Query: 234 KVVLITGASSGIGEALAHVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEPVVLE 413
K+ I G + GIG +L + ++ AS RK E Q+ + +++
Sbjct: 6 KIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATELQEWSKSHSNVH-----IIK 60
Query: 414 LNLADIDNMYLFVEKVYGICGHVDILVNNGGVTHR-GSILNTKTDVDQKIMFINYFGSVA 590
L+++ +++ ++V G VD+L N G+ H ++LNT DV N G +
Sbjct: 61 LDISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVLGPIH 120
Query: 591 LTKAVLP 611
+ +A P
Sbjct: 121 VYQAFYP 127
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 42.3 bits (95), Expect = 5e-05
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Frame = +3
Query: 225 LRGKVVLITGASSGIGEALAHVFYGQGCKIILAS-RRKRELERVKQDLISRKVAIQTLEP 401
L K L+TG SGIG+A A +F +G ++++ +R+ V +DLI R +
Sbjct: 40 LAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIER----EGRNC 95
Query: 402 VVLELNLADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKTDVDQKIMF-INYF 578
+ E L DN V+ G +D+LVNN + D + F N F
Sbjct: 96 WIWEGKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIF 155
Query: 579 GSVALTKAVLPKM 617
+TKA + M
Sbjct: 156 SFFWVTKAAISHM 168
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 41.1 bits (92), Expect = 1e-04
Identities = 30/96 (31%), Positives = 48/96 (50%)
Frame = +3
Query: 222 TLRGKVVLITGASSGIGEALAHVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEP 401
T+ G+VVLITGA+ GIG+ L +F G +RV I +Q
Sbjct: 2 TVEGRVVLITGAAGGIGKVLCKMFTELG-------------DRVAGIDIVDPSKVQD-AA 47
Query: 402 VVLELNLADIDNMYLFVEKVYGICGHVDILVNNGGV 509
+ L+ +++ D + +EKV G +D+L+NN G+
Sbjct: 48 LALQADVSKADQIETAIEKVIQTLGPIDVLINNAGL 83
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 39.9 bits (89), Expect = 3e-04
Identities = 29/126 (23%), Positives = 58/126 (46%)
Frame = +3
Query: 240 VLITGASSGIGEALAHVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEPVVLELN 419
+L+TG S G+G+A+A +G + + +R +L+ +L K+ + + ++
Sbjct: 25 ILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKIH-EDQQVSFESVD 83
Query: 420 LADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKTDVDQKIMFINYFGSVALTK 599
L ++++ +E++ HV V+ G G V +K M NY SV +
Sbjct: 84 LTSYESVHSMIERLPFCPDHV---VHCAGSCIPGFFTELDPSVFEKQMRQNYLASVYVCH 140
Query: 600 AVLPKM 617
A + +M
Sbjct: 141 AAIRRM 146
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 39.9 bits (89), Expect = 3e-04
Identities = 29/123 (23%), Positives = 57/123 (46%)
Frame = +3
Query: 240 VLITGASSGIGEALAHVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEPVVLELN 419
VLITG SSG+G+ +A ++ +G + + R + L+ Q L K TL ++ +
Sbjct: 4 VLITGGSSGLGKRIAQIWSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQSD 63
Query: 420 LADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKTDVDQKIMFINYFGSVALTK 599
+ ++ +++ VE +D +V+ GV + T I+ N ++ L+K
Sbjct: 64 MKNLKSIFESVE--------IDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSK 115
Query: 600 AVL 608
+
Sbjct: 116 MAI 118
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 39.1 bits (87), Expect = 5e-04
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +3
Query: 375 KVAIQTLEPVVLELNLADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKTDVDQ 554
KV + +V +L++ + ++ VEK G +D+L+NN G + + +T +
Sbjct: 8 KVLSRLENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIH 67
Query: 555 KIMFINYFGSVALTKAVLP 611
I N FG++ + KA+ P
Sbjct: 68 NIFNTNVFGALEVIKAITP 86
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 39.1 bits (87), Expect = 5e-04
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +3
Query: 375 KVAIQTLEPVVLELNLADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKTDVDQ 554
KV + +V +L++ + ++ VEK G +D+L+NN G + + +T +
Sbjct: 8 KVLSRLENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIH 67
Query: 555 KIMFINYFGSVALTKAVLP 611
I N FG++ + KA+ P
Sbjct: 68 NIFNTNVFGALEVIKAITP 86
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 37.1 bits (82), Expect = 0.002
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Frame = +3
Query: 234 KVVLITGASSGIGEALAHVFYGQGCKIILASRR-KRELERVKQDLISRKVAIQTLEPVVL 410
KV+L+TG+S GIG A A + K+I SR ELE + LI + ++ V
Sbjct: 7 KVILLTGSSKGIGLATAEALQ-KKAKVIAVSRSLTPELETL---LIQNPDSFVHVKGDVT 62
Query: 411 ELNLADIDNMYLFVEKVYGICGHVDILVNNGGVTHR-GSILNTKTDVDQKIMFINYFGSV 587
E+ A I+ ++K G +D ++ N GV I + + +K+ IN+F V
Sbjct: 63 EVGKASIETA---IKKF----GKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVV 115
Query: 588 ALTKAVLPKM 617
K +P +
Sbjct: 116 ETVKYAIPHL 125
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 33.1 bits (72), Expect = 0.033
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +3
Query: 147 IGVPFVVGVTMYGVINHLLQKKRRSTLRGKVVLITGASSGIGEALAHVFYGQGCKIILAS 326
+GVPF T Y L R T +VL+ GA +G A+ + GCK+I S
Sbjct: 130 VGVPFT---TAY------LALSRGETKGSDIVLVVGALGAVGSAVCQIAEDWGCKVITVS 180
Query: 327 R 329
R
Sbjct: 181 R 181
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 31.9 bits (69), Expect = 0.077
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 225 LRGKVVLITGASSGIGEALAHVFYGQGCKIILASR 329
+ G VV++TG SSGIG+ + G ++++ R
Sbjct: 73 MNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLR 107
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 30.3 bits (65), Expect = 0.23
Identities = 21/96 (21%), Positives = 45/96 (46%)
Frame = +3
Query: 222 TLRGKVVLITGASSGIGEALAHVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEP 401
+L+GK ++ G + GIG A+ VF G + + K+ I++ ++T
Sbjct: 18 SLKGKNAVVFGGARGIGHAICSVFAEAGANAFIVYNTTPGEKAAKE--IAQANGVKTYTC 75
Query: 402 VVLELNLADIDNMYLFVEKVYGICGHVDILVNNGGV 509
++++ + ++KV+ +DI+V N G+
Sbjct: 76 KCDVTIPKEVEHAFAEIQKVFDT---IDIVVPNNGI 108
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 28.7 bits (61), Expect = 0.72
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +3
Query: 417 NLADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKTDVDQKIMFINY 575
+L +D ++F E ++G GH+ + G V R N+K+ + +I+ +++
Sbjct: 354 DLVSVDICHIFNEMIFGKGGHLHCDPHGGNVLIRSKPKNSKSPRNYEIVLLDH 406
>SPCC1620.11 |mug87||nucleoporin Nic96 homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 851
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 378 VAIQTLEPVVLELNLADIDNMYLFVEKVYGICGHVDILVNN 500
+++Q P LEL+ D+D M+L + + ++ LV N
Sbjct: 86 LSLQVRPPTTLELSFTDVD-MFLKYHREKNVLNSLEALVQN 125
>SPBC1198.02 |dea2||adenine deaminase Dea2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 367
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 4 LPIYNLI*KIPKFYYH 51
LPIYN I K+PK +H
Sbjct: 4 LPIYNFIRKLPKCEHH 19
>SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 563
Score = 25.0 bits (52), Expect = 8.8
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Frame = +3
Query: 291 FYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEPVVLELNLADIDNMYLFVEKVYGI 470
F +G K+I S + R+ +I+ AI P ++ LNL+ I YL E V +
Sbjct: 315 FKKRGSKLI--SLELTDTARIHVSVIN---AIVDCCPNLISLNLSRI--FYLDDECVRLL 367
Query: 471 CGHVDI----LVNNGGVTHRGSILNTKTDVDQKIMFINYFGSVALTKAVLPKMI 620
G ++ + + GG+ + GSIL+ + + ++ G LT VL + I
Sbjct: 368 AGCRNLVSLKIESPGGIINDGSILDVLNQIGSGLHTLSLSGCTKLTDEVLKQGI 421
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 474 GHVDILVNNGGVTHRGSILNT 536
GH D ++ NGGVT S+ +T
Sbjct: 834 GHRDSVIGNGGVTGANSMSST 854
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 25.0 bits (52), Expect = 8.8
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = +3
Query: 99 KMNSLMKLQQKNWYTYIGVPFVVGVTMYGVINHLLQKKRRSTLRGKVVLITGASSGIGEA 278
K N K++ KN + +GV +HLL K T+ + +I S ++
Sbjct: 38 KNNKTQKVEPKNAFKVENQSNDIGVDTVDAFDHLLLDKTLPTIDAETEVIKNTSLSNSKS 97
Query: 279 LAH 287
H
Sbjct: 98 FLH 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,741,530
Number of Sequences: 5004
Number of extensions: 60792
Number of successful extensions: 168
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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