Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11k18
(665 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 86 4e-18
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.26
SPCC1393.08 |||transcription factor, zf-GATA type |Schizosacchar... 28 1.4
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 27 1.8
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 27 1.8
SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|... 27 2.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.4
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 27 3.2
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.2
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 27 3.2
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 3.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 3.2
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.6
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 26 5.6
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 25 7.4
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 25 9.8
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 25 9.8
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 25 9.8
SPCC338.17c |rad21||kleisin|Schizosaccharomyces pombe|chr 3|||Ma... 25 9.8
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 86.2 bits (204), Expect = 4e-18
Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 14/120 (11%)
Frame = +1
Query: 55 MDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVENGAEFS 234
MD++ +LE+LSLVSK+ +E+ NH G++D LAEFII+L D++ ++ FK ++ G EF+
Sbjct: 1 MDDLKELEYLSLVSKVASEIRNHTGIDDNTLAEFIINLHDQSKNYDEFKNNVLSCGGEFT 60
Query: 235 DSFMTNLLRIIQHMKP--------VNTSTLIKNIAETESENP------LAKKFPGLAIPN 372
DSF+ N+ R+I+ +KP VN + N A + ++ K FPGL+IPN
Sbjct: 61 DSFLQNISRLIKEIKPKDDIPTDNVNNGSNSVNGASHDLDSKDVDKQHQRKMFPGLSIPN 120
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 30.3 bits (65), Expect = 0.26
Identities = 23/92 (25%), Positives = 44/92 (47%)
Frame = -1
Query: 317 SAIFLINVDVFTGFMCCIIRSRFVMKESENSAPFSTNATLKVSNVGFLSAKSMMNSAKSL 138
+A L+ DV G + S V + N S+N+T +++ G +S S+ + +
Sbjct: 101 NAQLLVLDDVSFGVFSSLANS--VTGYASNYTQSSSNSTSTMNSTGSVSGGSVYPTNSTT 158
Query: 137 SFKPKWLSSSVHILDTSERCSNLVTSSILSIS 42
+ W SS+ +TS S+ SS++S++
Sbjct: 159 NSSISWNSSTSAATNTSSSSSSSSQSSVVSVN 190
>SPCC1393.08 |||transcription factor, zf-GATA type
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 227 SAPFSTNATLKVSNVGFLSAKSMMNSAKSLSFKPKWLSSS 108
S + TN K+SN+GF+S +S + + S P LS S
Sbjct: 213 SISYPTNYGCKLSNLGFMSPQSPVKRELNDSTSPSKLSES 252
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 27.5 bits (58), Expect = 1.8
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -1
Query: 245 MKESENSAPFSTNATLKVS-NVGFLSAKSMMNSAKSLSFKPKWLSSSVHILDTSERCSNL 69
M+ S + PF + K S + S K S KS + S+SVH ++ SN
Sbjct: 133 MQSSPSKDPFVSQDYEKESISSSQFSKKYSEGSLKSQQSNTR--SNSVHEKQNTDHASNA 190
Query: 68 VTSSILSISFTLKPSN 21
+SS + S +LKP+N
Sbjct: 191 SSSSSVVSSPSLKPNN 206
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 176 LSAKSMMNSAKSLSFKPKWLSSSVHILDTSERCSNLVTSS 57
L A +SA LS W+S S H+ DT E ++L +S
Sbjct: 17 LPASGKTSSAMKLSRYLTWMSVSTHLYDTKEIDNSLSENS 56
>SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 885
Score = 27.1 bits (57), Expect = 2.4
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = -1
Query: 344 FAKGFSLSVSAIFLINVDVFTGFMCCIIRSRFVMKESENSAPFSTNATLKVSNVGFLSAK 165
FA+G +SAI +++ F F + V K E A ++ N ++ + + K
Sbjct: 339 FAEG---EISAIVILDDGTFFSFS----NTELVWKREEALA-YAINPSILPTTLLTSYQK 390
Query: 164 SMMNSAKS-LSFKPKWLSSSVHILDTSERCSNLVTSSILSISFTLK 30
S+ + S +SF +W ++D + +SS+L +FT K
Sbjct: 391 SIQDEENSSVSFLNRWYRHFNQLIDFLKHPHGFTSSSVLDDAFTTK 436
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 2.4
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = -1
Query: 236 SENSAPFSTNATLKVSNVGFLSAKSMMNSAKSL----SFKPKWLSSSVHILDTSERCSNL 69
+ +S+ FS++ T S + S S +S S+ + P S S+ TS S+
Sbjct: 547 TSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSA 606
Query: 68 VTSSILSISFTLKPSN 21
TSS SIS ++ S+
Sbjct: 607 STSSPSSISSSISSSS 622
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 469 SSTDNVVDLAMAELEALAPSNSTTNELLIGKEPLKIESSR 588
++ DN ++ +EL A +N+TTN+ E +ESS+
Sbjct: 542 NTDDNEYSVSKSELYATGDTNNTTNQGYENSERKYVESSK 581
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.2
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -1
Query: 236 SENSAP-FSTNATLKVSNVGFLSAKSMMNSAKSLSFKPKWLSSSVHILDTSERCSNLVTS 60
S +S+P S+++TL S++ S S +S+ S S SSS +S S + +S
Sbjct: 217 SSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSS 276
Query: 59 SILSISFTLKPSNLTNSN 6
S S S T S +++S+
Sbjct: 277 SSSSSSPTSTSSTISSSS 294
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.6 bits (56), Expect = 3.2
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +1
Query: 37 VKLILKMDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVE 216
+ + K+ E L +S ++++ ELD + +ND+ I ++ + + V+
Sbjct: 110 ISISKKLSENENLP-VSKIAEVTNELDTLVRINDQLSRNHISGTTEEMQSSSSLIAGEVQ 168
Query: 217 NGAEFSDSFMTNLLRIIQHMKPVNTSTLIKNIA-ETESEN 333
G F D L ++ P + I+ + E E E+
Sbjct: 169 PGISFRDQLKVGKLEDTLYLGPTTSEAFIERLQNELELES 208
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 26.6 bits (56), Expect = 3.2
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 236 SENSAPFSTNATLKVSNVGFLSAKSMMNSAKSLSFKPKWLSSSVHILDTSERCSNLVTSS 57
S +S+ S++++ S+ S+ S +S+ S S SSSV I ++ + +SS
Sbjct: 165 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSS 224
Query: 56 ILSISFTLKPSN 21
S S + +PS+
Sbjct: 225 SSSSSSSSRPSS 236
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 3.2
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +1
Query: 52 KMDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVAL-VENGAE 228
K+D+ K E + +SK L+ L +DK+ I L DK + K+ L V +
Sbjct: 1157 KVDKHGKAEAIEWLSKYIDRLNQSLEYDDKN-----ITLKDKLLLLQCLKMLLEVSDRKL 1211
Query: 229 FSDSFMTNLLRIIQHMKPVNTSTLIKNIAETE 324
+ LL + +P NT+T ++ + E
Sbjct: 1212 IVEKLRPILLPSFEIPEPCNTATSVQELINPE 1243
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = -1
Query: 257 SRFVMKESENSAPFSTNATLKVSNVGFLSAKSMMNSAKSLSFKPKWLSSSVHILDTSERC 78
S + S +S+P S+++ ++ F+++ +S +S S SSS L +S
Sbjct: 53 SATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSA 112
Query: 77 SNLVTSSILSIS 42
S +SS ++S
Sbjct: 113 SPTSSSSSHALS 124
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 25.8 bits (54), Expect = 5.6
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 64 VTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVENGAEFSDSF 243
+TK E L V ++ NH G+ K ++ + A K+P F + N + ++
Sbjct: 278 LTKKERLYTVDRV--RRSNHSGIESKTFKKYQVIEALKDPVTWLFTFHVFCNQLSNNLAY 335
Query: 244 MTNLLRIIQHMKPVNTSTLI 303
NLL ++ +N STL+
Sbjct: 336 QQNLLFTSLNVSDLN-STLV 354
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 7.4
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 190 ETFKVALVENGAEFSDSFMTNLLRIIQHMKPVNTSTLIKNIAETESENPLAKK 348
E+ V + +N + F T + I QH KP+NT L K ++ L KK
Sbjct: 481 ESTLVVMTQN-EKLKRKFSTEIELIKQHTKPMNTCQLEKVPMYVKALTSLMKK 532
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 25.0 bits (52), Expect = 9.8
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 427 RITAKDLFTEEIKPSSTDNVVDLAMAELEALAPSNSTTNELLIGK--EPLKIESSRNSDH 600
R ++ D + +PSS D +L PS E + K EPL +S +NSDH
Sbjct: 523 RKSSNDFNSSNSRPSSNALKSDANENTDSSLPPSKKEFIEKSLHKLSEPLHDDSRQNSDH 582
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 25.0 bits (52), Expect = 9.8
Identities = 20/87 (22%), Positives = 37/87 (42%)
Frame = +1
Query: 127 GLNDKDLAEFIIDLADKNPTFETFKVALVENGAEFSDSFMTNLLRIIQHMKPVNTSTLIK 306
GL D L + I NP + ++E A + S + +++ P+N + K
Sbjct: 125 GLQDASLHDNIQSGKLDNPVISQNRRIVLEKLANPNSSKEYETIPTVENRHPLNKLSKTK 184
Query: 307 NIAETESENPLAKKFPGLAIPNDKPQS 387
+A E+ N L + G P +K ++
Sbjct: 185 TLAYEETINQLDETPGGTNYPMNKKKT 211
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 435 CYSLFVFFIITTFIRKRLRFII-WYGQ 358
CYS F FF+ T + R ++I W GQ
Sbjct: 1046 CYSDFAFFVNTNGWKSRQSWMINWEGQ 1072
>SPCC338.17c |rad21||kleisin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 628
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 557 PIRSSFVVELEGAKASNSAIAKSTTLSVELGLISSVNKSLAV 432
P RSS +EL S+S S+ LS+E G + V ++
Sbjct: 148 PSRSSNTLELHSLPISSSPSFPSSQLSIEAGRNAQVESGFSL 189
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.132 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,360,446
Number of Sequences: 5004
Number of extensions: 47044
Number of successful extensions: 137
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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