Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11k18
(665 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50487-1|BAA09078.1| 1220|Homo sapiens RNA helicase protein. 127 3e-29
BC047327-1|AAH47327.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 127 3e-29
BC044586-1|AAH44586.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 127 3e-29
BC020697-1|AAH20697.1| 119|Homo sapiens Unknown (protein for IM... 125 1e-28
BC045631-1|AAH45631.1| 999|Homo sapiens TNRC6C protein protein. 32 2.1
AK056421-1|BAB71179.1| 582|Homo sapiens .-). protein. 32 2.1
AK021871-1|BAB13923.1| 267|Homo sapiens protein ( Homo sapiens ... 32 2.1
L34060-1|AAA35628.1| 793|Homo sapiens cadherin-8 protein. 30 6.5
BC113416-1|AAI13417.1| 799|Homo sapiens cadherin 8, type 2 prot... 30 6.5
BC004854-1|AAH04854.2| 378|Homo sapiens DNPEP protein protein. 30 6.5
BC000653-1|AAH00653.2| 475|Homo sapiens aspartyl aminopeptidase... 30 6.5
AK001977-1|BAA92014.1| 485|Homo sapiens protein ( Homo sapiens ... 30 6.5
AK001777-1|BAA91903.1| 441|Homo sapiens protein ( Homo sapiens ... 30 6.5
AF005050-1|AAD01211.2| 475|Homo sapiens aspartyl aminopeptidase... 30 6.5
AC053503-1|AAY15050.1| 485|Homo sapiens unknown protein. 30 6.5
AB074170-1|BAE45735.1| 348|Homo sapiens putative protein produc... 30 6.5
AB035305-1|BAA87419.1| 799|Homo sapiens cadherin-8 protein. 30 6.5
>D50487-1|BAA09078.1| 1220|Homo sapiens RNA helicase protein.
Length = 1220
Score = 127 bits (307), Expect = 3e-29
Identities = 62/108 (57%), Positives = 84/108 (77%), Gaps = 2/108 (1%)
Frame = +1
Query: 58 DEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVENGAEFSD 237
+E+ KLE+LSLVSK+CTELDNHLG+NDKDLAEF+I LA+KN TF+TFK +LV+NGAEF+D
Sbjct: 20 EELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTD 79
Query: 238 SFMTNLLRIIQHMK-PVNTSTLIKNIAETESENPLAKK-FPGLAIPND 375
S ++NLLR+IQ M+ P ST + + ++E K+ FP L P++
Sbjct: 80 SLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFPVLCQPDN 127
>BC047327-1|AAH47327.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 8 protein.
Length = 1220
Score = 127 bits (307), Expect = 3e-29
Identities = 62/108 (57%), Positives = 84/108 (77%), Gaps = 2/108 (1%)
Frame = +1
Query: 58 DEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVENGAEFSD 237
+E+ KLE+LSLVSK+CTELDNHLG+NDKDLAEF+I LA+KN TF+TFK +LV+NGAEF+D
Sbjct: 20 EELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTD 79
Query: 238 SFMTNLLRIIQHMK-PVNTSTLIKNIAETESENPLAKK-FPGLAIPND 375
S ++NLLR+IQ M+ P ST + + ++E K+ FP L P++
Sbjct: 80 SLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFPVLCQPDN 127
>BC044586-1|AAH44586.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 8 protein.
Length = 1220
Score = 127 bits (307), Expect = 3e-29
Identities = 62/108 (57%), Positives = 84/108 (77%), Gaps = 2/108 (1%)
Frame = +1
Query: 58 DEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVENGAEFSD 237
+E+ KLE+LSLVSK+CTELDNHLG+NDKDLAEF+I LA+KN TF+TFK +LV+NGAEF+D
Sbjct: 20 EELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTD 79
Query: 238 SFMTNLLRIIQHMK-PVNTSTLIKNIAETESENPLAKK-FPGLAIPND 375
S ++NLLR+IQ M+ P ST + + ++E K+ FP L P++
Sbjct: 80 SLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFPVLCQPDN 127
>BC020697-1|AAH20697.1| 119|Homo sapiens Unknown (protein for
IMAGE:4658842) protein.
Length = 119
Score = 125 bits (302), Expect = 1e-28
Identities = 59/98 (60%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = +1
Query: 58 DEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVENGAEFSD 237
+E+ KLE+LSLVSK+CTELDNHLG+NDKDLAEF+I LA+KN TF+TFK +LV+NGAEF+D
Sbjct: 20 EELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTD 79
Query: 238 SFMTNLLRIIQHMK-PVNTSTLIKNIAETESENPLAKK 348
S ++NLLR+IQ M+ P ST + + ++E KK
Sbjct: 80 SLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKKKKKK 117
>BC045631-1|AAH45631.1| 999|Homo sapiens TNRC6C protein protein.
Length = 999
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = -1
Query: 257 SRFVMKESENSAPFSTNATLKVSNVGFLSAKSMMNSAKSLSFKPKWLSSSVHILDTSERC 78
+R+++K +S P S NATL S+ LSA +S S++ P I T
Sbjct: 698 NRYLLKSGGSSPPSSQNATLPSSSAWPLSASGYSSSFSSIASAPSVAGKLSDIKSTWSSG 757
Query: 77 SNLVTSSILSISFTLKPSNLT 15
T + LS P N T
Sbjct: 758 PTSHTQASLSHELWKVPRNST 778
>AK056421-1|BAB71179.1| 582|Homo sapiens .-). protein.
Length = 582
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = -1
Query: 257 SRFVMKESENSAPFSTNATLKVSNVGFLSAKSMMNSAKSLSFKPKWLSSSVHILDTSERC 78
+R+++K +S P S NATL S+ LSA +S S++ P I T
Sbjct: 281 NRYLLKSGGSSPPSSQNATLPSSSAWPLSASGYSSSFSSIASAPSVAGKLSDIKSTWSSG 340
Query: 77 SNLVTSSILSISFTLKPSNLT 15
T + LS P N T
Sbjct: 341 PTSHTQASLSHELWKVPRNST 361
>AK021871-1|BAB13923.1| 267|Homo sapiens protein ( Homo sapiens
cDNA FLJ11809 fis, clone HEMBA1006309, highly similar to
Homo sapiens aspartyl aminopeptidase mRNA. ).
Length = 267
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 55 MDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFET 195
++ V + H L+S +C HLGL+ KD+ E + LAD P T
Sbjct: 209 LNAVDERHHSVLMSLLCA----HLGLSPKDIVEMELCLADTQPAVRT 251
>L34060-1|AAA35628.1| 793|Homo sapiens cadherin-8 protein.
Length = 793
Score = 30.3 bits (65), Expect = 6.5
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 16 VRFDGFKVKLILKMDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFET 195
+ D K+ L +D + H ++ I TE+ NH ++ +A ++D+ D P F +
Sbjct: 434 INADDGKITLATPLDRELSVWHN--ITIIATEIRNHSQISRVPVAIKVLDVNDNAPEFAS 491
Query: 196 -FKVALVENG 222
++ L ENG
Sbjct: 492 EYEAFLCENG 501
>BC113416-1|AAI13417.1| 799|Homo sapiens cadherin 8, type 2
protein.
Length = 799
Score = 30.3 bits (65), Expect = 6.5
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 16 VRFDGFKVKLILKMDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFET 195
+ D K+ L +D + H ++ I TE+ NH ++ +A ++D+ D P F +
Sbjct: 441 INADDGKITLATPLDRELSVWHN--ITIIATEIRNHSQISRVPVAIKVLDVNDNAPEFAS 498
Query: 196 -FKVALVENG 222
++ L ENG
Sbjct: 499 EYEAFLCENG 508
>BC004854-1|AAH04854.2| 378|Homo sapiens DNPEP protein protein.
Length = 378
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 55 MDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNP 183
++ V + H L+S +C HLGL+ KD+ E + LAD P
Sbjct: 112 LNAVDERHHSVLMSLLCA----HLGLSPKDIVEMELCLADTQP 150
>BC000653-1|AAH00653.2| 475|Homo sapiens aspartyl aminopeptidase
protein.
Length = 475
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 55 MDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNP 183
++ V + H L+S +C HLGL+ KD+ E + LAD P
Sbjct: 209 LNAVDERHHSVLMSLLCA----HLGLSPKDIVEMELCLADTQP 247
>AK001977-1|BAA92014.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ11115 fis, clone PLACE1005955, weakly similar to
VACUOLAR AMINOPEPTIDASE I PRECURSOR (EC 3.4.11.22). ).
Length = 485
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 55 MDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNP 183
++ V + H L+S +C HLGL+ KD+ E + LAD P
Sbjct: 219 LNAVDERHHSVLMSLLCA----HLGLSPKDIVEMELCLADTQP 257
>AK001777-1|BAA91903.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ10915 fis, clone OVARC1000288, weakly similar to
VACUOLAR AMINOPEPTIDASE I PRECURSOR (EC 3.4.11.22). ).
Length = 441
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 55 MDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNP 183
++ V + H L+S +C HLGL+ KD+ E + LAD P
Sbjct: 219 LNAVDERHHSVLMSLLCA----HLGLSPKDIVEMELCLADTQP 257
>AF005050-1|AAD01211.2| 475|Homo sapiens aspartyl aminopeptidase
protein.
Length = 475
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 55 MDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNP 183
++ V + H L+S +C HLGL+ KD+ E + LAD P
Sbjct: 209 LNAVDERHHSVLMSLLCA----HLGLSPKDIVEMELCLADTQP 247
>AC053503-1|AAY15050.1| 485|Homo sapiens unknown protein.
Length = 485
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 55 MDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNP 183
++ V + H L+S +C HLGL+ KD+ E + LAD P
Sbjct: 219 LNAVDERHHSVLMSLLCA----HLGLSPKDIVEMELCLADTQP 257
>AB074170-1|BAE45735.1| 348|Homo sapiens putative protein product
of Nbla04261 protein.
Length = 348
Score = 30.3 bits (65), Expect = 6.5
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 16 VRFDGFKVKLILKMDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFET 195
+ D K+ L +D + H ++ I TE+ NH ++ +A ++D+ D P F +
Sbjct: 257 INADDGKITLATPLDRELSVWHN--ITIIATEIRNHSQISRVPVAIKVLDVNDNAPEFAS 314
Query: 196 -FKVALVENG 222
++ L ENG
Sbjct: 315 EYEAFLCENG 324
>AB035305-1|BAA87419.1| 799|Homo sapiens cadherin-8 protein.
Length = 799
Score = 30.3 bits (65), Expect = 6.5
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 16 VRFDGFKVKLILKMDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFET 195
+ D K+ L +D + H ++ I TE+ NH ++ +A ++D+ D P F +
Sbjct: 441 INADDGKITLATPLDRELSVWHN--ITIIATEIRNHSQISRVPVAIKVLDVNDNAPEFAS 498
Query: 196 -FKVALVENG 222
++ L ENG
Sbjct: 499 EYEAFLCENG 508
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.132 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,051,205
Number of Sequences: 237096
Number of extensions: 1430409
Number of successful extensions: 1772
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1772
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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