Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11k18
         (665 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.6  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   6.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.0  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   6.0  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   8.0  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   8.0  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   8.0  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   8.0  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 239 ESENSAPFSTNATLKVSNVGFLSAKSMMNSAKSL 138
           E  NS+PFS  + L+  N+ F+S+    +S  +L
Sbjct: 469 ELHNSSPFSIYSFLERLNLIFMSSSLQWSSTHTL 502


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 239 ESENSAPFSTNATLKVSNVGFLSAKSMMNSAKSL 138
           E  NS+PFS  + L+  N+ F+S+    +S  +L
Sbjct: 507 ELHNSSPFSIYSFLERLNLIFMSSSLQWSSTHTL 540


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 109 ELDNHLGLNDKDLAEFIIDLADKNPTFE 192
           E DN   +NDK    FI+D   +N  FE
Sbjct: 81  ESDNSKEVNDKKEENFIVDRL-RNDLFE 107


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 125 KWLSSSVHILDTSERCSNLVTSSILSISFTLK 30
           KW++SS     TS++       +  SIS T K
Sbjct: 195 KWVNSSEIFYTTSQQYYGHFAGNFSSISITFK 226


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 283 VNTSTLIKNIAETESENPLAKKFPG 357
           + TS++  N+   ++ NP+A   PG
Sbjct: 530 IYTSSVNSNLTVNQTVNPVAINIPG 554


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = +1

Query: 214 ENGAEFSDSFMTNLLRIIQHMKPVNTSTLIKNIAETESENPLAKKFPGL 360
           E+ AE   +   N L   +   P   S      A      PL+ KFPG+
Sbjct: 281 EHEAESEHTSTPNFLSEAKIFPPTPGSFNFSMAALATEHTPLSVKFPGM 329


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 520 APSNSTTNELLIGKEPLKIESSRN 591
           A S+ TT   LIGK     +SSR+
Sbjct: 131 ADSDVTTLPTLIGKNETSTQSSRS 154


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 520 APSNSTTNELLIGKEPLKIESSRN 591
           A S+ TT   LIGK     +SSR+
Sbjct: 179 ADSDVTTLPTLIGKNETSTQSSRS 202


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 520 APSNSTTNELLIGKEPLKIESSRN 591
           A S+ TT   LIGK     +SSR+
Sbjct: 179 ADSDVTTLPTLIGKNETSTQSSRS 202


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 520 APSNSTTNELLIGKEPLKIESSRN 591
           A S+ TT   LIGK     +SSR+
Sbjct: 179 ADSDVTTLPTLIGKNETSTQSSRS 202


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.132    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,863
Number of Sequences: 438
Number of extensions: 2949
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)