Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11k17
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   6.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.9  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 275 RIPCWLLVVWSSQALVGTRIVL 210
           R+   +L+VW+  A +G+ IVL
Sbjct: 302 RVWLTILLVWAISAAIGSPIVL 323


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 538 IISPNYVSPWGHSRSTTTLTS 476
           I +P Y  P+  S+ T T+TS
Sbjct: 56  IYNPRYPLPYSGSKCTWTITS 76


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/39 (23%), Positives = 22/39 (56%)
 Frame = +1

Query: 244 LQTTSSQQGILAAGPVVGTIVGSLVWGYLADTRGRRLML 360
           + +T+ ++ ++   P+V +   +  W Y+AD  G  L++
Sbjct: 176 INSTTGKRNVVT--PIVQSFDYNNTWVYIADVEGYALII 212


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 161 TNSMLYKPKPALSTALSIVSS 99
           T+S    P+PA STA ++V S
Sbjct: 835 TSSTSTSPRPASSTAATLVLS 855


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +1

Query: 205  YSSTILVPTSACELQTTSSQQGILAAGPVVGTIVGSLVWGY 327
            Y+ T+ VP SA  L  TSS    +      G   G+ + GY
Sbjct: 1397 YTLTVQVPPSAPVLYVTSSTSSSILLHWKSGHNGGASLTGY 1437


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +1

Query: 205  YSSTILVPTSACELQTTSSQQGILAAGPVVGTIVGSLVWGY 327
            Y+ T+ VP SA  L  TSS    +      G   G+ + GY
Sbjct: 1393 YTLTVQVPPSAPVLYVTSSTSSSILLHWKSGHNGGASLTGY 1433


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,548
Number of Sequences: 438
Number of extensions: 3879
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)