Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11k12
(613 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1... 32 1.4
BC041329-1|AAH41329.1| 268|Homo sapiens ELL associated factor 1... 31 2.4
BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type c... 31 3.2
AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens ... 31 3.2
AF272973-1|AAK58687.1| 268|Homo sapiens EAF1 protein. 31 3.2
Z34282-1|CAA84036.1| 98|Homo sapiens mucin protein. 30 5.6
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 30 5.6
L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein... 30 5.6
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 30 7.4
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 30 7.4
Z34276-1|CAA84030.1| 94|Homo sapiens mucin protein. 29 9.8
BT006720-1|AAP35366.1| 350|Homo sapiens forkhead box A3 protein. 29 9.8
BC016024-1|AAH16024.1| 350|Homo sapiens forkhead box A3 protein. 29 9.8
AY157990-1|AAN76325.1| 1778|Homo sapiens myeloid/lymphoid or mix... 29 9.8
AY147037-1|AAN17675.1| 1858|Homo sapiens MLL5 protein. 29 9.8
AK223473-1|BAD97193.1| 350|Homo sapiens forkhead box A3 variant... 29 9.8
AK128234-1|BAC87344.1| 167|Homo sapiens protein ( Homo sapiens ... 29 9.8
AF519459-1|AAM74947.1| 1858|Homo sapiens MLL5 protein. 29 9.8
AF176114-1|AAD51980.1| 350|Homo sapiens hepatocyte nuclear fact... 29 9.8
>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
protein.
Length = 3530
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 289 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNL 417
PKP L+P L +P +P++P+ + L Q + PET+ S L
Sbjct: 2518 PKP--LAPAPLAKAPRLPIKPVAAPVLAQDQASPETTSPSPEL 2558
>BC041329-1|AAH41329.1| 268|Homo sapiens ELL associated factor 1
protein.
Length = 268
Score = 31.5 bits (68), Expect = 2.4
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +1
Query: 178 HGTTSMTLTKASPSSTFKRS*RTWPARAIMQVKHQRWPKPPELSPIYLPVSPVMPVQPLT 357
H T L K S S K++ R + I Q+ +PP+ S P P P+
Sbjct: 92 HDTGEFVLEKLSSSIQVKKT-RAEGSSKIQARMEQQPTRPPQTS------QPPPPPPPMP 144
Query: 358 SLTLTQTASGPETSPASDNLS 420
T+ GP+TSP DN S
Sbjct: 145 FRAPTKPPVGPKTSPLKDNPS 165
>BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type
containing 10 protein.
Length = 434
Score = 31.1 bits (67), Expect = 3.2
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = +1
Query: 289 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 423
P P ++P+ + V+PV PV QPL +T++ T + T P AS ++ +
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429
>AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ14451 fis, clone HEMBB1001834. ).
Length = 434
Score = 31.1 bits (67), Expect = 3.2
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = +1
Query: 289 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 423
P P ++P+ + V+PV PV QPL +T++ T + T P AS ++ +
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429
>AF272973-1|AAK58687.1| 268|Homo sapiens EAF1 protein.
Length = 268
Score = 31.1 bits (67), Expect = 3.2
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +1
Query: 178 HGTTSMTLTKASPSSTFKRS*RTWPARAIMQVKHQRWPKPPELSPIYLPVSPVMPVQPLT 357
H T L K S S K++ R + I Q+ +PP+ S P P P+
Sbjct: 92 HDTGEYVLEKLSSSIQVKKT-RAEGSSKIQARMEQQPTRPPQTS------QPPPPPPPMP 144
Query: 358 SLTLTQTASGPETSPASDNLS 420
T+ GP+TSP DN S
Sbjct: 145 FRAPTKPPVGPKTSPLKDNPS 165
>Z34282-1|CAA84036.1| 98|Homo sapiens mucin protein.
Length = 98
Score = 30.3 bits (65), Expect = 5.6
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +1
Query: 181 GTTSMTLTKASPSSTFKRS*RTWPARAIMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 360
GTT + S +S S + P + PE +P SPV P TS
Sbjct: 3 GTTPSAVPTTSITSAPTTSTNSAPISSTTSATTTSRISGPETTP-----SPV-PTASTTS 56
Query: 361 LTLTQTASGPETSPA----SDNLSVPSSDT 438
+ T T SGP T+P+ + +SVP++ T
Sbjct: 57 ASTTSTTSGPGTTPSPVPTTSTISVPTTST 86
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 30.3 bits (65), Expect = 5.6
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +1
Query: 181 GTTSMTLTKASPSSTFKRS*RTWPARAIMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 360
GTT + S +S S + P + PE +P SPV P TS
Sbjct: 157 GTTPSAVPTTSITSVPTTSTNSAPISSTTSATTTSRISGPETTP-----SPV-PTASTTS 210
Query: 361 LTLTQTASGPETSPA----SDNLSVPSSDT 438
+ T T SGP T+P+ + +SVP++ T
Sbjct: 211 ASTTSTTSGPGTTPSPVPTTSTISVPTTST 240
>L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein
protein.
Length = 347
Score = 30.3 bits (65), Expect = 5.6
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 286 WPKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASG-PETSPASDNLSVP 426
W PE +Y PV+PV + PL S +TL +S P PAS S P
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSPYPGGLPASPLPSGP 63
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 29.9 bits (64), Expect = 7.4
Identities = 37/123 (30%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Frame = +1
Query: 76 QAPTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHGTTSMTLTKASP--SSTFKRS*RTW 249
Q+PT PS + + T K P S + +S T SP S T + T
Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPT--SPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1871
Query: 250 PARAIMQVKHQ-RWPKPPELSPIYLPVSPV-MPVQPLTSLTL-TQTASGPETSPASDNLS 420
P + + PK SP Y P SPV P P S T T + + P+ SP S S
Sbjct: 1872 PKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYS 1931
Query: 421 VPS 429
S
Sbjct: 1932 PTS 1934
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 29.9 bits (64), Expect = 7.4
Identities = 37/123 (30%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Frame = +1
Query: 76 QAPTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHGTTSMTLTKASP--SSTFKRS*RTW 249
Q+PT PS + + T K P S + +S T SP S T + T
Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPT--SPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1871
Query: 250 PARAIMQVKHQ-RWPKPPELSPIYLPVSPV-MPVQPLTSLTL-TQTASGPETSPASDNLS 420
P + + PK SP Y P SPV P P S T T + + P+ SP S S
Sbjct: 1872 PKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYS 1931
Query: 421 VPS 429
S
Sbjct: 1932 PTS 1934
>Z34276-1|CAA84030.1| 94|Homo sapiens mucin protein.
Length = 94
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +1
Query: 328 SPVMPVQPLTSLTLTQTASGPETSPA----SDNLSVPSSDT 438
SPV P TS + T T SGP T+P+ + +SVP++ T
Sbjct: 5 SPV-PTASTTSASTTSTTSGPGTTPSPVPTTSTISVPTTST 44
>BT006720-1|AAP35366.1| 350|Homo sapiens forkhead box A3 protein.
Length = 350
Score = 29.5 bits (63), Expect = 9.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 286 WPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGP 390
W PE +Y PV+PV + PL S S P
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSP 49
>BC016024-1|AAH16024.1| 350|Homo sapiens forkhead box A3 protein.
Length = 350
Score = 29.5 bits (63), Expect = 9.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 286 WPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGP 390
W PE +Y PV+PV + PL S S P
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSP 49
>AY157990-1|AAN76325.1| 1778|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia 5 protein.
Length = 1778
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 310 PIYLPVSPVMPVQPLTSLTLTQTASGPETSP 402
PIY PV+PV P P ++ + S PE+SP
Sbjct: 849 PIYSPVTPVTPGTPGNTMHF-ENISSPESSP 878
>AY147037-1|AAN17675.1| 1858|Homo sapiens MLL5 protein.
Length = 1858
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 310 PIYLPVSPVMPVQPLTSLTLTQTASGPETSP 402
PIY PV+PV P P ++ + S PE+SP
Sbjct: 929 PIYSPVTPVTPGTPGNTMHF-ENISSPESSP 958
>AK223473-1|BAD97193.1| 350|Homo sapiens forkhead box A3 variant
protein.
Length = 350
Score = 29.5 bits (63), Expect = 9.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 286 WPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGP 390
W PE +Y PV+PV + PL S S P
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSP 49
>AK128234-1|BAC87344.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ46368 fis, clone TESTI4051504. ).
Length = 167
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +1
Query: 277 HQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASD 411
H R P P + + S V PV +T T T PE PA D
Sbjct: 21 HPRLPAPRGQGSLSILCSAVSPVPSVTPSTWMATTEKPELGPAHD 65
>AF519459-1|AAM74947.1| 1858|Homo sapiens MLL5 protein.
Length = 1858
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 310 PIYLPVSPVMPVQPLTSLTLTQTASGPETSP 402
PIY PV+PV P P ++ + S PE+SP
Sbjct: 929 PIYSPVTPVTPGTPGNTMHF-ENISSPESSP 958
>AF176114-1|AAD51980.1| 350|Homo sapiens hepatocyte nuclear
factor-3 gamma protein.
Length = 350
Score = 29.5 bits (63), Expect = 9.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 286 WPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGP 390
W PE +Y PV+PV + PL S S P
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSP 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,739,419
Number of Sequences: 237096
Number of extensions: 1941270
Number of successful extensions: 6819
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6811
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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