Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11k09
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 34 0.076
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 34 0.076
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 32 0.40
Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 30 1.6
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 2.1
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 2.1
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 2.1
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 2.1
AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical ... 29 2.1
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 29 2.8
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 3.8
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 3.8
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.8
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 28 5.0
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 28 5.0
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 5.0
AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical ... 28 5.0
Z99288-1|CAB16545.2| 339|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF106573-5|AAF02104.2| 358|Caenorhabditis elegans Seven tm rece... 27 8.7
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -1
Query: 231 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 52
T ++ T+ P + TTT T PT T++ T+ AP + T TTT
Sbjct: 148 TETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTT 207
Query: 51 AGAATIVLEPTDTSS 7
T PT T++
Sbjct: 208 TTPTTTTTVPTTTTT 222
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = -1
Query: 231 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 52
T + T+ E + TTT T PT T++ T+ P + T TTT
Sbjct: 134 TTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTT 193
Query: 51 AGAATIVLEPTDTSS 7
T PT T++
Sbjct: 194 TAPTTTTTTPTTTTT 208
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = -1
Query: 231 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 52
T ++ T+ P + TTT T PT T++ T+ P + T TTT
Sbjct: 155 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTT 214
Query: 51 AGAATIVLEPTDTSS 7
T PT T++
Sbjct: 215 TVPTTTTTTPTTTTT 229
Score = 34.7 bits (76), Expect = 0.057
Identities = 19/76 (25%), Positives = 29/76 (38%)
Frame = -1
Query: 231 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 52
T ++ T P + TTT T PT T++ T+ P + TTT
Sbjct: 141 TTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTT 200
Query: 51 AGAATIVLEPTDTSSL 4
T PT T+++
Sbjct: 201 TTPTTTTTTPTTTTTV 216
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/75 (25%), Positives = 28/75 (37%)
Frame = -1
Query: 231 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 52
T + T P ++ + TTT T T T+ T+ E + T TTT
Sbjct: 99 TTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTT 158
Query: 51 AGAATIVLEPTDTSS 7
T PT T++
Sbjct: 159 TTPTTTTTTPTTTTT 173
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = -1
Query: 231 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT-- 58
T ++ T+ P + TTT T PT T+++ T+ P + T+ T
Sbjct: 176 TTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPT 235
Query: 57 TTAGAATIVLEPTDTSS 7
TT T P T+S
Sbjct: 236 TTTTTPTTTTTPATTTS 252
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = -1
Query: 231 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 52
T ++ T+ P + TTT T PT T++ T+ P + T TTT
Sbjct: 169 TTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTT 228
Query: 51 AGAATIVLEPTDTSS 7
T PT T++
Sbjct: 229 TTTTT----PTTTTT 239
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = -1
Query: 231 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT-- 58
T ++ T+ AP + TTT T PT T++ T+ + T+ T
Sbjct: 183 TTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPT 242
Query: 57 TTAGAATIVLEPTDTS 10
TT AT E T T+
Sbjct: 243 TTTTPATTTSETTTTT 258
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = -1
Query: 231 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAP-VEDSITSFTT 55
T ++ T+ P + TTT T PT T++ T+ P ++ + TT
Sbjct: 162 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTT 221
Query: 54 TAGAATIVLEPTDTSS 7
T T T T++
Sbjct: 222 TTPTTTTTTTTTPTTT 237
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 165 TTTAGAATIVLEPTDT-SSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSS 7
TTT T E T T ++ T P + T TTT T PT T++
Sbjct: 127 TTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTT 180
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/77 (28%), Positives = 32/77 (41%)
Frame = -1
Query: 237 ELTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 58
E+T + +T+ + + TTT T PT T+S TS + TS T
Sbjct: 51 EVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTS-TTSTTTTTTPTTTTSTT 109
Query: 57 TTAGAATIVLEPTDTSS 7
TT T PT T++
Sbjct: 110 TTTTTTTTTATPTTTTT 126
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = -1
Query: 240 LELTNASSLITS-VALAPVED---SIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDS 73
L LT +I S +A +P D + TTT T E T T+ +T+ +
Sbjct: 11 LLLTYKLDVINSCIATSPTADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTST 70
Query: 72 ITSFTTTAGAATIVLEPTDTSS 7
++ TTT T PT T+S
Sbjct: 71 TSTTTTTTPTTTTTTTPTTTTS 92
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -1
Query: 165 TTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSS 7
TTT T EP T++ T+ + + T TTT T T T++
Sbjct: 46 TTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTT 98
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 34.3 bits (75), Expect = 0.076
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = -1
Query: 162 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSS 7
TT+ A+T EP+ TS++ TS + +PV ++TS ++ ++T V PT T S
Sbjct: 433 TTSTASTSTTEPS-TSTVTTSPSTSPVTSTVTS---SSSSSTTVTTPTSTES 480
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -1
Query: 234 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTT 55
+ + S+ T+ V ++ S TT + + V TS+ S + +E + T+FT+
Sbjct: 271 IESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTT-IESTSTTFTS 329
Query: 54 TAGAATIVLEPTDTSS 7
TA +T T SS
Sbjct: 330 TASTSTSSTSTTQQSS 345
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -1
Query: 171 SFTTTAGAATIVLEPTD--TSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTS 10
+FTTT +T EP+ T++ +TS + T+ TT+ A+T EP+ ++
Sbjct: 393 TFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTST 448
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 34.3 bits (75), Expect = 0.076
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = -1
Query: 162 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSS 7
TT+ A+T EP+ TS++ TS + +PV ++TS ++ ++T V PT T S
Sbjct: 433 TTSTASTSTTEPS-TSTVTTSPSTSPVTSTVTS---SSSSSTTVTTPTSTES 480
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -1
Query: 234 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTT 55
+ + S+ T+ V ++ S TT + + V TS+ S + +E + T+FT+
Sbjct: 271 IESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTT-IESTSTTFTS 329
Query: 54 TAGAATIVLEPTDTSS 7
TA +T T SS
Sbjct: 330 TASTSTSSTSTTQQSS 345
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -1
Query: 171 SFTTTAGAATIVLEPTD--TSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTS 10
+FTTT +T EP+ T++ +TS + T+ TT+ A+T EP+ ++
Sbjct: 393 TFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTST 448
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -1
Query: 189 VEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAP--VEDSITSFTTTAGAATIVLEPTD 16
++ SI + +TI+++ T+T++ T+ P + + TS TTT T EPT
Sbjct: 121 LDSSINATLVVPPNSTIIID-TETTTTFTTTTEKPTTIPSTTTSSTTTTTTTTTTEEPTT 179
Query: 15 TSSLI 1
T+S I
Sbjct: 180 TTSPI 184
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -1
Query: 231 TNASSLITSVALAP--VEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 58
T ++ T+ P + + S TTT T EPT T+S I + + + T+ T
Sbjct: 141 TETTTTFTTTTEKPTTIPSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTS--TSTTTTET 198
Query: 57 TTAGAATIVLEPTDTSSL 4
T AT EPT ++ L
Sbjct: 199 PTTSEAT-THEPTASTEL 215
>Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical
protein K04D7.6 protein.
Length = 360
Score = 31.1 bits (67), Expect = 0.70
Identities = 22/44 (50%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 132 EPTDTSSLITSVALAP--VEDSITSFTTTAGAATIVLEPTDTSS 7
E T LI AL P E SI+ TTTA A IV EPT +SS
Sbjct: 258 EATPVFILIAFGALMPDLKEWSISKTTTTAEATIIVTEPTSSSS 301
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 237 ELTNASSLITSVALAP--VEDSIGSFTTTAGAATIVLEPTDTSS 112
E T LI AL P E SI TTTA A IV EPT +SS
Sbjct: 258 EATPVFILIAFGALMPDLKEWSISKTTTTAEATIIVTEPTSSSS 301
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -1
Query: 165 TTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSS 7
TTT T PT T++ T+ P + T TTT +T + E TS+
Sbjct: 97 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRSTPLTEVFRTST 149
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 29.9 bits (64), Expect = 1.6
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Frame = -1
Query: 234 LTNASSL---ITSVALAPVEDS-----IGSFTTTAGAATIVLEPTDTSSLITSVALAPVE 79
L NASS +TS AP +S + S TTT + T +E T T+ + S + PV+
Sbjct: 398 LLNASSARPNVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVK 457
Query: 78 DSITSFTTTAGAATIVLEPTDTSS 7
S T T + T T TSS
Sbjct: 458 -STTIAPVTMPSTTEKTTFTSTSS 480
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Frame = -1
Query: 213 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAP-------VEDSITSFTT 55
+ V+ P S S TT + T + T +S T+ P S T+ TT
Sbjct: 577 LRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTT 636
Query: 54 TAGAATIVLEPTDTSS 7
T+ AT +PT T++
Sbjct: 637 TSTTATTTPQPTTTTT 652
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Frame = -1
Query: 213 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAP-------VEDSITSFTT 55
+ V+ P S S TT + T + T +S T+ P S T+ TT
Sbjct: 577 LRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTT 636
Query: 54 TAGAATIVLEPTDTSS 7
T+ AT +PT T++
Sbjct: 637 TSTTATTTPQPTTTTT 652
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -1
Query: 231 TNASSLITSVALAPVEDSI--GSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 58
T ASS +TS A ++ + TTT A+T + TS+ +TS + P +T+
Sbjct: 225 TEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTV-PTTTVVTTVP 283
Query: 57 TTAGAATIVLEPTDTSS 7
TT +T + T++
Sbjct: 284 TTTATSTSTSTASTTTT 300
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -1
Query: 231 TNASSLITSVALAPVEDSI--GSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 58
T ASS +TS A ++ + TTT A+T + TS+ +TS + P +T+
Sbjct: 207 TEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTV-PTTTVVTTVP 265
Query: 57 TTAGAATIVLEPTDTSS 7
TT +T + T++
Sbjct: 266 TTTATSTSTSTASTTTT 282
>AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical
protein C35A11.3 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = +2
Query: 26 SKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASAT 205
+ T A + V+ +++ TE+ + T A+P N + S+T +AT
Sbjct: 37 TSTTTATESTTVSTSTTATSSTPTTEIFSSNSPSTETTTCASPTTSTNGHLTSTTDGAAT 96
Query: 206 EVINDEAL 229
I E L
Sbjct: 97 SPIKTEVL 104
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = -1
Query: 240 LELTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSF 61
L T A++++T+ + V + + TT+ A T T++ IT+VA ++
Sbjct: 344 LTTTKATTVLTTTPVK-VTPATTTLPTTSLALETTTTATRTTAKITAVATVARTNTTQPP 402
Query: 60 TTTAGAATIVLEPTDTSS 7
TTT ++T L T TSS
Sbjct: 403 TTTPLSSTTALPTTLTSS 420
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 71 IESSTGASATEVINDEVSVGSKTIVAAPAVV-VNDPIESSTGASATEV 211
I STG++AT V SVGS T A+P+ + TG++ T V
Sbjct: 268 ISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVV 315
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 71 IESSTGASATEVINDEVSVGSKTIVAAPAVV-VNDPIESSTGASATEV 211
I STG++AT V SVGS T A+P+ + TG++ T V
Sbjct: 475 ISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVV 522
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 71 IESSTGASATEVINDEVSVGSKTIVAAPAVV-VNDPIESSTGASATEV 211
I STG++AT V SVGS T A+P+ + TG++ T V
Sbjct: 475 ISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVV 522
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = -1
Query: 234 LTNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVA-LAPVEDSITSFT 58
L ASS T + AP G+ TTTA AA ++ T+ A + P + T
Sbjct: 444 LFGASSTTTPASTAPTGGLFGAATTTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAAT 503
Query: 57 TT--AGAATIVLEPTDTSS 7
TT A AAT+ P+ S+
Sbjct: 504 TTTPATAATLGQTPSTVSA 522
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Frame = -1
Query: 222 SSLITSVALAPVEDSIGSFTTTAGA-------------ATIVLEPTDTSSLITSVALAPV 82
S++ TS P S TTTA T V++ T T+ +++ V
Sbjct: 190 STITTSTTPNPSSPSTVQSTTTAEPTSTITSTTVPESSTTSVVQSTTTAEPTSTITSTTV 249
Query: 81 EDSITSFTTTAGAATIVLEPTDTSSLI 1
+S TS T+ A+T L PT T S I
Sbjct: 250 PESSTSLLTSTLASTTTLIPTSTMSTI 276
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/62 (29%), Positives = 22/62 (35%)
Frame = +2
Query: 14 VSVGSKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTG 193
V S T+ P VV T S + V T+V AP+ VV P T
Sbjct: 356 VVTSSPTVATTPTTVVTTPSTVVTVPSTVVTVPTTVVTNPSTVVTAPSTVVTVPTTVMTS 415
Query: 194 AS 199
S
Sbjct: 416 RS 417
>AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical
protein C45H4.13 protein.
Length = 349
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 481 YGFRFNNHNFFCNYFWLNSF*VNCRRSCGYSSFSLWG 371
YG+ +NN+ + NY+ NS+ RSC S+S G
Sbjct: 311 YGYGYNNNYYSGNYYCCNSY-----RSCWRQSYSCSG 342
>Z99288-1|CAB16545.2| 339|Caenorhabditis elegans Hypothetical
protein ZK262.1 protein.
Length = 339
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 511 SCSGFCSDSFYGFRFNNHNFFCNYFWL 431
SC F + S G N N FCN+FW+
Sbjct: 107 SCQ-FLTISIAGIFENRFNTFCNFFWV 132
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -3
Query: 265 CSGFYFNSFRAHQCLVINYFGSTCSR*RLNW-IIYNHSRCCNN 140
C G +SFR C V G TC + W + ++ C +N
Sbjct: 135 CDGLISSSFRFDACGVCGGRGDTCDNGKFIWKVSEEYTACASN 177
>Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical
protein C11H1.5 protein.
Length = 528
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = -1
Query: 225 ASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAG 46
A ++I + E SI T T +T PT T+S ITS AP S S + A
Sbjct: 316 APTVIKPYPPSSTESSIDFTTATESTST----PTSTTSDITSTTTAPTSASTYSTDSWAT 371
Query: 45 AATIVLEPTDTS 10
A +++ T T+
Sbjct: 372 ARQELVDFTATT 383
>AF106573-5|AAF02104.2| 358|Caenorhabditis elegans Seven tm
receptor protein 79 protein.
Length = 358
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -3
Query: 466 NNHNFFCNYFWLNSF*VNCRRSCGYSSFSLWGCYNYSFRYSICENFRTQILWRF 305
N NF C W+ CGYS SL ++FR+ + N + WRF
Sbjct: 85 NRFNFPCLGVWM--LLATNWICCGYSILSLNA--QFAFRWIVMSNSGKNLFWRF 134
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 27.5 bits (58), Expect = 8.7
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = -1
Query: 231 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLIT-SVALAPVEDSI--TSF 61
T S +T+V E S TTT T EPT T+S T + P S T+
Sbjct: 246 TTTHSSLTAVPGTTEETSTEPETTTTSTTTT--EPTTTTSTTTQTTTTVPTSTSTISTTS 303
Query: 60 TTTAGAATIVLEPTDTSS 7
TTT T + T+S
Sbjct: 304 TTTTTPTTTTTTTSTTTS 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,050,232
Number of Sequences: 27780
Number of extensions: 217440
Number of successful extensions: 853
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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