Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11k06
         (688 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101042-1|AAI01043.1|  790|Homo sapiens zinc finger protein 560...    30   8.9  
BC101041-1|AAI01042.1|  790|Homo sapiens zinc finger protein 560...    30   8.9  
BC101040-1|AAI01041.1|  790|Homo sapiens zinc finger protein 560...    30   8.9  
AK056548-1|BAB71213.1|  790|Homo sapiens protein ( Homo sapiens ...    30   8.9  

>BC101042-1|AAI01043.1|  790|Homo sapiens zinc finger protein 560
           protein.
          Length = 790

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 454 CGNFFTTNTSSDVNVSEYLHKIELSTA*IGK-YRNQPKFSSHISSHVFIQ 308
           CG  FT +TS  VNV  ++ K        GK +R     ++H+ +H+ I+
Sbjct: 325 CGEAFTHSTSHAVNVETHIIKNPYECKECGKDFRYPTHLNNHMQTHIGIK 374


>BC101041-1|AAI01042.1|  790|Homo sapiens zinc finger protein 560
           protein.
          Length = 790

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 454 CGNFFTTNTSSDVNVSEYLHKIELSTA*IGK-YRNQPKFSSHISSHVFIQ 308
           CG  FT +TS  VNV  ++ K        GK +R     ++H+ +H+ I+
Sbjct: 325 CGEAFTHSTSHAVNVETHIIKNPYECKECGKDFRYPTHLNNHMQTHIGIK 374


>BC101040-1|AAI01041.1|  790|Homo sapiens zinc finger protein 560
           protein.
          Length = 790

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 454 CGNFFTTNTSSDVNVSEYLHKIELSTA*IGK-YRNQPKFSSHISSHVFIQ 308
           CG  FT +TS  VNV  ++ K        GK +R     ++H+ +H+ I+
Sbjct: 325 CGEAFTHSTSHAVNVETHIIKNPYECKECGKDFRYPTHLNNHMQTHIGIK 374


>AK056548-1|BAB71213.1|  790|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31986 fis, clone NT2RP7008720, weakly similar to
           ZINC FINGER PROTEIN 84. ).
          Length = 790

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 454 CGNFFTTNTSSDVNVSEYLHKIELSTA*IGK-YRNQPKFSSHISSHVFIQ 308
           CG  FT +TS  VNV  ++ K        GK +R     ++H+ +H+ I+
Sbjct: 325 CGEAFTHSTSHAVNVETHIIKNPYECKECGKDFRYPTHLNNHMQTHIGIK 374


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,792,375
Number of Sequences: 237096
Number of extensions: 1936609
Number of successful extensions: 3467
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3467
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)