Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11i17
         (122 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   0.26 
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   1.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   1.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   1.4  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    19   4.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   4.2  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    19   5.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     19   5.5  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 0.26
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 47  TETCLVWYFVF*FFNKIVMYK 109
           T   L+ YF+F +FN +V ++
Sbjct: 14  TSFILINYFIFLYFNSLVRFR 34



 Score = 21.0 bits (42), Expect = 1.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 88  EKLKYKIPN*TSLSEMTPVEELYIY 14
           +KLK K+   T  +  TP +  YIY
Sbjct: 57  DKLKKKLEEWTGKNITTPWDYYYIY 81


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 7   LQHRYIIPRPVSSH*DLFSLVF 72
           +QH +  P P++S  +L  L F
Sbjct: 348 IQHHFFYPDPLASKYELHGLKF 369


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 88  EKLKYKIPN*TSLSEMTPVEELYIY 14
           +KLK K+   T  +  TP +  YIY
Sbjct: 154 DKLKKKLEEWTGKNITTPWDYYYIY 178


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 88  EKLKYKIPN*TSLSEMTPVEELYIY 14
           +KLK K+   T  +  TP +  YIY
Sbjct: 169 DKLKKKLEEWTGKNITTPWDYYYIY 193


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
          protein precursor protein.
          Length = 153

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 4  FLQHRYIIPRPVSSH 48
          FLQ+   +P+P+ S+
Sbjct: 37 FLQYPGCVPKPIPSY 51


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +1

Query: 10  QHRYIIPRPVSSH*DLFSLVF 72
           +HR I P P+ +  D+   ++
Sbjct: 631 KHRAIRPEPIDAQFDIIQNIY 651


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +1

Query: 22  IIPRPVSSH 48
           ++PRP+S H
Sbjct: 653 LLPRPISCH 661


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 29  LDRCHLTETCLVWYFVF*FFN 91
           LDR H  +   V YF+F  FN
Sbjct: 210 LDRFHNDKYSNVPYFLFGDFN 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,945
Number of Sequences: 438
Number of extensions: 344
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 21
effective length of database: 137,145
effective search space used:  2605755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)