Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11i13
         (412 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy...    36   0.002
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo...    32   0.040
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy...    32   0.040
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce...    31   0.053
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa...    27   0.86 
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom...    25   3.5  
SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr ...    24   8.0  

>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 559

 Score = 35.9 bits (79), Expect = 0.002
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = +1

Query: 25  RGTVXXXXXXXXXXXXXLQMLFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKR 204
           RGT              L  L F  + +V+G     + F G C+  A++  L++PETK R
Sbjct: 470 RGTAHGLSAALGKCGAILASLLFNFLTSVIGYGNVMWIFCG-CMWGAIFFTLLLPETKMR 528

Query: 205 RIDEI 219
             DEI
Sbjct: 529 DADEI 533


>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 572

 Score = 31.9 bits (69), Expect = 0.040
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = +1

Query: 25  RGTVXXXXXXXXXXXXXLQMLFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKR 204
           RGT              L  L F  +  V+G     + F G C+   +   L++PETK R
Sbjct: 481 RGTAHGVSAALGKCGAILASLLFNFLTGVIGYGNVMWIFCG-CMWGGILFTLLLPETKGR 539

Query: 205 RIDEI 219
             DEI
Sbjct: 540 DADEI 544


>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 573

 Score = 31.9 bits (69), Expect = 0.040
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = +1

Query: 25  RGTVXXXXXXXXXXXXXLQMLFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKR 204
           RGT              L  L F  + +++G     + F G C+   +   L++PETK R
Sbjct: 482 RGTAHGISAALGKCGAILASLLFNFLTSIIGYGNVMWIFCG-CMWGGILFTLLLPETKGR 540

Query: 205 RIDEI 219
             DEI
Sbjct: 541 DADEI 545


>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 583

 Score = 31.5 bits (68), Expect = 0.053
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 76  LQMLFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 219
           L  L F  +  V+G     + F G C++    V L++PET  R  D I
Sbjct: 508 LSALLFNKLTEVIGFGNVLWIFFG-CMVAGAVVTLILPETANRDADLI 554


>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
           Ght7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 518

 Score = 27.5 bits (58), Expect = 0.86
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 88  FFKP-VANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 219
           FF P + N +G +   Y F    L  A  + L V ETK R ++EI
Sbjct: 390 FFTPFITNSIG-FKYGYIFASCNLTGAAIIFLFVHETKGRTLEEI 433


>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 535

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 88  FFKP-VANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 219
           FF P ++N +G +   Y F    L  A+ + L   ETK   ++EI
Sbjct: 422 FFTPFISNSIG-FKYGYVFAACNLCAAIIIFLFAKETKGLTLEEI 465


>SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 664

 Score = 24.2 bits (50), Expect = 8.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 115 GLYAAFYFFGGVCLLTALYVVLVVPETKK 201
           G+  AF++  G C+   L+ VL +   +K
Sbjct: 83  GVSGAFWYASGACVQILLFTVLAIELKRK 111


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 952,304
Number of Sequences: 5004
Number of extensions: 10701
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 142254980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)