Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11i10
         (404 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK123032-1|BAC85519.1|  274|Homo sapiens  factor.  protein.            31   1.9  
BC108252-1|AAI08253.1|  532|Homo sapiens LRRC8E protein protein.       30   2.6  
BC070089-1|AAH70089.1|  796|Homo sapiens leucine rich repeat con...    30   2.6  
BC022216-1|AAH22216.2|  592|Homo sapiens LRRC8E protein protein.       30   2.6  
AL834474-1|CAD39133.1|  622|Homo sapiens hypothetical protein pr...    30   2.6  
BC001214-1|AAH01214.1|  334|Homo sapiens leucine carboxyl methyl...    29   5.9  
AF151826-1|AAD34063.1|  334|Homo sapiens CGI-68 protein protein.       29   5.9  
AF037601-1|AAF18267.1|  334|Homo sapiens leucine carboxyl methyl...    29   5.9  
AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens ...    29   7.8  

>AK123032-1|BAC85519.1|  274|Homo sapiens  factor.  protein.
          Length = 274

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
 Frame = -1

Query: 227 VCSCDQTKTCGCEQEVVFVLGVIHC---FFICYPLQLSVHYCHC 105
           VC C     C C    V+V G +H     ++C  +++ V  C C
Sbjct: 88  VCICVCAHVCTCVHSFVYVCGCVHVGMRVYLCEHVRMCVSLCAC 131


>BC108252-1|AAI08253.1|  532|Homo sapiens LRRC8E protein protein.
          Length = 532

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 205 LVWSQLQTPLCPCRVESVEVEGALSFCC 288
           LV+ +  + L  CRVE+ EV G  SFCC
Sbjct: 10  LVYVEKISFLVACRVETSEVTGYASFCC 37


>BC070089-1|AAH70089.1|  796|Homo sapiens leucine rich repeat
           containing 8 family, member E protein.
          Length = 796

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 205 LVWSQLQTPLCPCRVESVEVEGALSFCC 288
           LV+ +  + L  CRVE+ EV G  SFCC
Sbjct: 274 LVYVEKISFLVACRVETSEVTGYASFCC 301


>BC022216-1|AAH22216.2|  592|Homo sapiens LRRC8E protein protein.
          Length = 592

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 205 LVWSQLQTPLCPCRVESVEVEGALSFCC 288
           LV+ +  + L  CRVE+ EV G  SFCC
Sbjct: 70  LVYVEKISFLVACRVETSEVTGYASFCC 97


>AL834474-1|CAD39133.1|  622|Homo sapiens hypothetical protein
           protein.
          Length = 622

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 205 LVWSQLQTPLCPCRVESVEVEGALSFCC 288
           LV+ +  + L  CRVE+ EV G  SFCC
Sbjct: 100 LVYVEKISFLVACRVETSEVTGYASFCC 127


>BC001214-1|AAH01214.1|  334|Homo sapiens leucine carboxyl
           methyltransferase 1 protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 254 LSTRQGHKGVCSCDQTKTCGCEQEVVFVLGVIHCFFICYPLQLSVHYCHCP 102
           ++TRQ    + SC  T +C  + E   V G      +C    +S+ Y H P
Sbjct: 1   MATRQRESSITSCCSTSSCDADDE--GVRGTCEDASLCKRFAVSIGYWHDP 49


>AF151826-1|AAD34063.1|  334|Homo sapiens CGI-68 protein protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 254 LSTRQGHKGVCSCDQTKTCGCEQEVVFVLGVIHCFFICYPLQLSVHYCHCP 102
           ++TRQ    + SC  T +C  + E   V G      +C    +S+ Y H P
Sbjct: 1   MATRQRESSITSCCSTSSCDADDE--GVRGTCEDASLCKRFAVSIGYWHDP 49


>AF037601-1|AAF18267.1|  334|Homo sapiens leucine carboxyl
           methyltransferase protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 254 LSTRQGHKGVCSCDQTKTCGCEQEVVFVLGVIHCFFICYPLQLSVHYCHCP 102
           ++TRQ    + SC  T +C  + E   V G      +C    +S+ Y H P
Sbjct: 1   MATRQRESSITSCCSTSSCDADDE--GVRGTCEDASLCKRFAVSIGYWHDP 49


>AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12547 fis, clone NT2RM4000634. ).
          Length = 307

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -1

Query: 227 VCSCDQTKTCGCEQEVVFVLGVIHCFFICYPLQLSVHYCHCPNLVI 90
           VC+C     CGC    V    V  C F+C  L + VH C C  L +
Sbjct: 169 VCAC----VCGCTFVCVCAC-VCGCTFVCVCLCVWVHICVCVCLCV 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,273,543
Number of Sequences: 237096
Number of extensions: 1097513
Number of successful extensions: 2836
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2836
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)