Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11i08
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M91432-1|AAA59567.1| 421|Homo sapiens medium-chain acyl-CoA deh... 195 1e-49
M16827-1|AAA51566.1| 421|Homo sapiens ACADM protein. 195 1e-49
BC005377-1|AAH05377.1| 421|Homo sapiens acyl-Coenzyme A dehydro... 195 1e-49
AL357314-1|CAI22390.1| 421|Homo sapiens acyl-Coenzyme A dehydro... 195 1e-49
AF251043-1|AAF63626.1| 425|Homo sapiens medium-chain acyl-CoA d... 195 1e-49
AL357314-2|CAI22389.1| 454|Homo sapiens acyl-Coenzyme A dehydro... 101 2e-44
M74096-1|AAA51565.1| 430|Homo sapiens long chain acyl-CoA dehyd... 78 2e-14
BC064549-1|AAH64549.1| 430|Homo sapiens acyl-Coenzyme A dehydro... 78 2e-14
BC039063-1|AAH39063.1| 430|Homo sapiens acyl-Coenzyme A dehydro... 78 2e-14
AC006994-2|AAY14881.1| 430|Homo sapiens unknown protein. 78 2e-14
Z80345-1|CAB02492.1| 412|Homo sapiens acyl-CoA dehydrogenase pr... 62 2e-09
U83992-1|AAD00552.1| 412|Homo sapiens short chain acyl CoA dehy... 62 2e-09
M26393-1|AAA60307.1| 412|Homo sapiens ACADS protein. 62 2e-09
BC025963-1|AAH25963.1| 412|Homo sapiens acyl-Coenzyme A dehydro... 62 2e-09
M34192-1|AAA52711.1| 423|Homo sapiens IVD protein. 61 3e-09
BT007145-1|AAP35809.1| 423|Homo sapiens isovaleryl Coenzyme A d... 61 3e-09
BC017202-1|AAH17202.1| 423|Homo sapiens isovaleryl Coenzyme A d... 61 3e-09
AF191218-1|AAF20182.1| 423|Homo sapiens isovaleryl dehydrogenas... 61 3e-09
BC013354-1|AAH13354.1| 621|Homo sapiens acyl-Coenzyme A dehydro... 61 4e-09
BC007970-1|AAH07970.1| 621|Homo sapiens acyl-Coenzyme A dehydro... 61 4e-09
BC001964-1|AAH01964.1| 415|Homo sapiens acyl-Coenzyme A dehydro... 61 4e-09
AK024012-1|BAB14775.1| 621|Homo sapiens protein ( Homo sapiens ... 61 4e-09
AK000359-1|BAA91109.1| 415|Homo sapiens protein ( Homo sapiens ... 61 4e-09
AF327351-1|AAL56011.1| 621|Homo sapiens very-long-chain acyl-Co... 61 4e-09
AF260689-1|AAF97922.1| 415|Homo sapiens acyl-CoA dehydrogenase ... 61 4e-09
AF126245-1|AAF12736.1| 415|Homo sapiens acyl-Coenzyme A dehydro... 61 4e-09
AB209427-1|BAD92664.1| 274|Homo sapiens acyl-Coenzyme A dehydro... 61 4e-09
U12778-1|AAA74424.1| 432|Homo sapiens acyl-CoA dehydrogenase pr... 56 1e-07
BC013756-1|AAH13756.1| 432|Homo sapiens acyl-Coenzyme A dehydro... 56 1e-07
AL831821-1|CAD38535.2| 427|Homo sapiens hypothetical protein pr... 56 1e-07
AL731666-2|CAI10847.1| 432|Homo sapiens acyl-Coenzyme A dehydro... 56 1e-07
AF260678-1|AAF97921.1| 432|Homo sapiens short/branched chain ac... 56 1e-07
AB209538-1|BAD92775.1| 263|Homo sapiens acyl-Coenzyme A dehydro... 53 1e-06
X86556-1|CAA60253.1| 655|Homo sapiens very-long-chain acyl-CoA ... 50 5e-06
L46590-1|AAA79002.1| 655|Homo sapiens long chain acyl-CoA dehyd... 50 5e-06
D43682-1|BAA07781.1| 655|Homo sapiens VLACD protein. 50 5e-06
BC020218-1|AAH20218.1| 633|Homo sapiens acyl-Coenzyme A dehydro... 50 5e-06
BC012912-1|AAH12912.1| 655|Homo sapiens acyl-Coenzyme A dehydro... 50 5e-06
BC000399-1|AAH00399.1| 655|Homo sapiens acyl-Coenzyme A dehydro... 50 5e-06
AK222518-1|BAD96238.1| 655|Homo sapiens acyl-Coenzyme A dehydro... 50 5e-06
U69141-1|AAB08455.1| 438|Homo sapiens glutaryl-CoA dehydrogenas... 50 7e-06
BT006706-1|AAP35352.1| 438|Homo sapiens glutaryl-Coenzyme A deh... 50 7e-06
BC002579-1|AAH02579.1| 438|Homo sapiens glutaryl-Coenzyme A deh... 50 7e-06
AF012342-1|AAC52079.1| 438|Homo sapiens glutaryl-CoA dehydrogen... 50 7e-06
AD000092-4|AAB51174.1| 438|Homo sapiens glutaryl Co-A dehydroge... 50 7e-06
AK022568-1|BAB14104.1| 498|Homo sapiens protein ( Homo sapiens ... 48 2e-05
D78298-1|BAA29057.1| 655|Homo sapiens very-long-chain acyl-CoA ... 47 6e-05
AL731666-1|CAI10846.1| 170|Homo sapiens acyl-Coenzyme A dehydro... 38 0.022
AK125373-1|BAC86149.1| 141|Homo sapiens protein ( Homo sapiens ... 37 0.067
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 35 0.21
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 35 0.21
X13097-1|CAA31489.1| 291|Homo sapiens plasminogen activator pre... 33 0.63
X07393-1|CAA30302.1| 562|Homo sapiens protein ( Human fetal lun... 33 0.63
M18182-1|AAA36800.1| 562|Homo sapiens protein ( Human plasminog... 33 0.63
M15518-1|AAA60111.1| 562|Homo sapiens tissue-type plasminogen a... 33 0.63
L00153-1|AAB59510.1| 562|Homo sapiens plasminogen activator pro... 33 0.63
K03021-1|AAA98809.1| 562|Homo sapiens plasminogen activator pro... 33 0.63
BT007060-1|AAP35709.1| 562|Homo sapiens plasminogen activator, ... 33 0.63
BC095403-1|AAH95403.1| 562|Homo sapiens plasminogen activator, ... 33 0.63
BC018636-1|AAH18636.3| 562|Homo sapiens plasminogen activator, ... 33 0.63
BC013968-1|AAH13968.3| 562|Homo sapiens plasminogen activator, ... 33 0.63
BC007231-1|AAH07231.1| 562|Homo sapiens plasminogen activator, ... 33 0.63
AY291060-1|AAP34246.1| 291|Homo sapiens plasminogen activator, ... 33 0.63
AY221101-1|AAO34406.1| 562|Homo sapiens tissue plasminogen acti... 33 0.63
BC022033-1|AAH22033.1| 684|Homo sapiens kelch repeat and BTB (P... 32 1.4
AL354696-3|CAI16613.1| 684|Homo sapiens kelch repeat and BTB (P... 32 1.4
AK091344-1|BAC03641.1| 684|Homo sapiens protein ( Homo sapiens ... 32 1.4
U66616-1|AAC50694.1| 1213|Homo sapiens SWI/SNF complex 170 KDa s... 32 1.9
>M91432-1|AAA59567.1| 421|Homo sapiens medium-chain acyl-CoA
dehydrogenase protein.
Length = 421
Score = 195 bits (475), Expect = 1e-49
Identities = 87/144 (60%), Positives = 111/144 (77%)
Frame = +2
Query: 197 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIP 376
P GF FE T++QK Q ARKF ++EIIPVA +YDKTGEYP P++++AWE+GLMN HIP
Sbjct: 33 PGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIP 92
Query: 377 EHCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLID 556
E+CGG+G G F+ C++++ELA+ SLGQ PIIIAGN +Q+KKYLGR+ +
Sbjct: 93 ENCGGLG-LGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTE 151
Query: 557 EPLVAAYGVTEPGAGSDVAGIKTR 628
EPL+ AY VTEPGAGSDVAGIKT+
Sbjct: 152 EPLMCAYCVTEPGAGSDVAGIKTK 175
>M16827-1|AAA51566.1| 421|Homo sapiens ACADM protein.
Length = 421
Score = 195 bits (475), Expect = 1e-49
Identities = 87/144 (60%), Positives = 111/144 (77%)
Frame = +2
Query: 197 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIP 376
P GF FE T++QK Q ARKF ++EIIPVA +YDKTGEYP P++++AWE+GLMN HIP
Sbjct: 33 PGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIP 92
Query: 377 EHCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLID 556
E+CGG+G G F+ C++++ELA+ SLGQ PIIIAGN +Q+KKYLGR+ +
Sbjct: 93 ENCGGLG-LGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTE 151
Query: 557 EPLVAAYGVTEPGAGSDVAGIKTR 628
EPL+ AY VTEPGAGSDVAGIKT+
Sbjct: 152 EPLMCAYCVTEPGAGSDVAGIKTK 175
>BC005377-1|AAH05377.1| 421|Homo sapiens acyl-Coenzyme A
dehydrogenase, C-4 to C-12 straight chain protein.
Length = 421
Score = 195 bits (475), Expect = 1e-49
Identities = 87/144 (60%), Positives = 111/144 (77%)
Frame = +2
Query: 197 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIP 376
P GF FE T++QK Q ARKF ++EIIPVA +YDKTGEYP P++++AWE+GLMN HIP
Sbjct: 33 PGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIP 92
Query: 377 EHCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLID 556
E+CGG+G G F+ C++++ELA+ SLGQ PIIIAGN +Q+KKYLGR+ +
Sbjct: 93 ENCGGLG-LGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTE 151
Query: 557 EPLVAAYGVTEPGAGSDVAGIKTR 628
EPL+ AY VTEPGAGSDVAGIKT+
Sbjct: 152 EPLMCAYCVTEPGAGSDVAGIKTK 175
>AL357314-1|CAI22390.1| 421|Homo sapiens acyl-Coenzyme A
dehydrogenase, C-4 to C-12 straight chain protein.
Length = 421
Score = 195 bits (475), Expect = 1e-49
Identities = 87/144 (60%), Positives = 111/144 (77%)
Frame = +2
Query: 197 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIP 376
P GF FE T++QK Q ARKF ++EIIPVA +YDKTGEYP P++++AWE+GLMN HIP
Sbjct: 33 PGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIP 92
Query: 377 EHCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLID 556
E+CGG+G G F+ C++++ELA+ SLGQ PIIIAGN +Q+KKYLGR+ +
Sbjct: 93 ENCGGLG-LGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTE 151
Query: 557 EPLVAAYGVTEPGAGSDVAGIKTR 628
EPL+ AY VTEPGAGSDVAGIKT+
Sbjct: 152 EPLMCAYCVTEPGAGSDVAGIKTK 175
>AF251043-1|AAF63626.1| 425|Homo sapiens medium-chain acyl-CoA
dehydrogenase protein.
Length = 425
Score = 195 bits (475), Expect = 1e-49
Identities = 87/144 (60%), Positives = 111/144 (77%)
Frame = +2
Query: 197 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIP 376
P GF FE T++QK Q ARKF ++EIIPVA +YDKTGEYP P++++AWE+GLMN HIP
Sbjct: 37 PGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIP 96
Query: 377 EHCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLID 556
E+CGG+G G F+ C++++ELA+ SLGQ PIIIAGN +Q+KKYLGR+ +
Sbjct: 97 ENCGGLG-LGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTE 155
Query: 557 EPLVAAYGVTEPGAGSDVAGIKTR 628
EPL+ AY VTEPGAGSDVAGIKT+
Sbjct: 156 EPLMCAYCVTEPGAGSDVAGIKTK 179
>AL357314-2|CAI22389.1| 454|Homo sapiens acyl-Coenzyme A
dehydrogenase, C-4 to C-12 straight chain protein.
Length = 454
Score = 101 bits (241), Expect(2) = 2e-44
Identities = 49/90 (54%), Positives = 65/90 (72%)
Frame = +2
Query: 359 MNGHIPEHCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKY 538
+N H+ + GG+G G F+ C++++ELA+ SLGQ PIIIAGN +Q+KKY
Sbjct: 122 LNLHL--NLGGLG-LGTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKY 178
Query: 539 LGRLIDEPLVAAYGVTEPGAGSDVAGIKTR 628
LGR+ +EPL+ AY VTEPGAGSDVAGIKT+
Sbjct: 179 LGRMTEEPLMCAYCVTEPGAGSDVAGIKTK 208
Score = 98.7 bits (235), Expect(2) = 2e-44
Identities = 40/63 (63%), Positives = 51/63 (80%)
Frame = +2
Query: 197 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIP 376
P GF FE T++QK Q ARKF ++EIIPVA +YDKTGEYP P++++AWE+GLMN HIP
Sbjct: 33 PGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIP 92
Query: 377 EHC 385
E+C
Sbjct: 93 ENC 95
>M74096-1|AAA51565.1| 430|Homo sapiens long chain acyl-CoA
dehydrogenase protein.
Length = 430
Score = 78.2 bits (184), Expect = 2e-14
Identities = 44/132 (33%), Positives = 71/132 (53%)
Frame = +2
Query: 230 EQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGV 409
E ++ RKF ++E+IP +++K GE V +KA + GL+ +I EH GGIG +
Sbjct: 56 EHDIFRKSVRKFFQEEVIPHHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGG-DL 114
Query: 410 FEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTE 589
+ IV +E A+ + + I G++EQ K ++ ++ + A +TE
Sbjct: 115 YSAAIVWEEQAYSNCSGPGFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTE 174
Query: 590 PGAGSDVAGIKT 625
PGAGSD+ GIKT
Sbjct: 175 PGAGSDLQGIKT 186
>BC064549-1|AAH64549.1| 430|Homo sapiens acyl-Coenzyme A
dehydrogenase, long chain protein.
Length = 430
Score = 78.2 bits (184), Expect = 2e-14
Identities = 44/132 (33%), Positives = 71/132 (53%)
Frame = +2
Query: 230 EQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGV 409
E ++ RKF ++E+IP +++K GE V +KA + GL+ +I EH GGIG +
Sbjct: 56 EHDIFRKSVRKFFQEEVIPHHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGG-DL 114
Query: 410 FEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTE 589
+ IV +E A+ + + I G++EQ K ++ ++ + A +TE
Sbjct: 115 YSAAIVWEEQAYSNCSGPGFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTE 174
Query: 590 PGAGSDVAGIKT 625
PGAGSD+ GIKT
Sbjct: 175 PGAGSDLQGIKT 186
>BC039063-1|AAH39063.1| 430|Homo sapiens acyl-Coenzyme A
dehydrogenase, long chain protein.
Length = 430
Score = 78.2 bits (184), Expect = 2e-14
Identities = 44/132 (33%), Positives = 71/132 (53%)
Frame = +2
Query: 230 EQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGV 409
E ++ RKF ++E+IP +++K GE V +KA + GL+ +I EH GGIG +
Sbjct: 56 EHDIFRKSVRKFFQEEVIPHHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGG-DL 114
Query: 410 FEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTE 589
+ IV +E A+ + + I G++EQ K ++ ++ + A +TE
Sbjct: 115 YSAAIVWEEQAYSNCSGPGFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTE 174
Query: 590 PGAGSDVAGIKT 625
PGAGSD+ GIKT
Sbjct: 175 PGAGSDLQGIKT 186
>AC006994-2|AAY14881.1| 430|Homo sapiens unknown protein.
Length = 430
Score = 78.2 bits (184), Expect = 2e-14
Identities = 44/132 (33%), Positives = 71/132 (53%)
Frame = +2
Query: 230 EQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGV 409
E ++ RKF ++E+IP +++K GE V +KA + GL+ +I EH GGIG +
Sbjct: 56 EHDIFRKSVRKFFQEEVIPHHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGG-DL 114
Query: 410 FEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTE 589
+ IV +E A+ + + I G++EQ K ++ ++ + A +TE
Sbjct: 115 YSAAIVWEEQAYSNCSGPGFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTE 174
Query: 590 PGAGSDVAGIKT 625
PGAGSD+ GIKT
Sbjct: 175 PGAGSDLQGIKT 186
>Z80345-1|CAB02492.1| 412|Homo sapiens acyl-CoA dehydrogenase
protein.
Length = 412
Score = 61.7 bits (143), Expect = 2e-09
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 397
EL + + L + R F + E+ P+A Q DK +P VKK +GL+ +PE GG G
Sbjct: 33 ELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAG 92
Query: 398 NFGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
I +E++ SL PI+ G+KEQ++ ++ +
Sbjct: 93 -LDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGC 151
Query: 575 YGVTEPGAGSDVAGIKT 625
+ ++EPG GSD T
Sbjct: 152 FALSEPGNGSDAGAAST 168
>U83992-1|AAD00552.1| 412|Homo sapiens short chain acyl CoA
dehydrogenase protein.
Length = 412
Score = 61.7 bits (143), Expect = 2e-09
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 397
EL + + L + R F + E+ P+A Q DK +P VKK +GL+ +PE GG G
Sbjct: 33 ELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAG 92
Query: 398 NFGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
I +E++ SL PI+ G+KEQ++ ++ +
Sbjct: 93 -LDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGC 151
Query: 575 YGVTEPGAGSDVAGIKT 625
+ ++EPG GSD T
Sbjct: 152 FALSEPGNGSDAGAAST 168
>M26393-1|AAA60307.1| 412|Homo sapiens ACADS protein.
Length = 412
Score = 61.7 bits (143), Expect = 2e-09
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 397
EL + + L + R F + E+ P+A Q DK +P VKK +GL+ +PE GG G
Sbjct: 33 ELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAG 92
Query: 398 NFGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
I +E++ SL PI+ G+KEQ++ ++ +
Sbjct: 93 -LDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGC 151
Query: 575 YGVTEPGAGSDVAGIKT 625
+ ++EPG GSD T
Sbjct: 152 FALSEPGNGSDAGAAST 168
>BC025963-1|AAH25963.1| 412|Homo sapiens acyl-Coenzyme A
dehydrogenase, C-2 to C-3 short chain protein.
Length = 412
Score = 61.7 bits (143), Expect = 2e-09
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 397
EL + + L + R F + E+ P+A Q DK +P VKK +GL+ +PE GG G
Sbjct: 33 ELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAG 92
Query: 398 NFGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
I +E++ SL PI+ G+KEQ++ ++ +
Sbjct: 93 -LDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGC 151
Query: 575 YGVTEPGAGSDVAGIKT 625
+ ++EPG GSD T
Sbjct: 152 FALSEPGNGSDAGAAST 168
>M34192-1|AAA52711.1| 423|Homo sapiens IVD protein.
Length = 423
Score = 61.3 bits (142), Expect = 3e-09
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Frame = +2
Query: 221 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYP--WPVVKKAWEVGLMNGHIPEHCGGI 394
L++EQ+ L++ KF ++ + P A + D++ E+ K+ +G++ P GG
Sbjct: 42 LSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGS 101
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXS-LGQTPIIIAGNKEQQKKYLGRLIDEPLVA 571
G G E +V +E++ S L ++ GN+ Q++KYL +LI +
Sbjct: 102 G-LGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIG 160
Query: 572 AYGVTEPGAGSDVAGIKTR 628
A ++EP AGSDV +K +
Sbjct: 161 ALAMSEPNAGSDVVSMKLK 179
>BT007145-1|AAP35809.1| 423|Homo sapiens isovaleryl Coenzyme A
dehydrogenase protein.
Length = 423
Score = 61.3 bits (142), Expect = 3e-09
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Frame = +2
Query: 221 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYP--WPVVKKAWEVGLMNGHIPEHCGGI 394
L++EQ+ L++ KF ++ + P A + D++ E+ K+ +G++ P GG
Sbjct: 42 LSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGS 101
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXS-LGQTPIIIAGNKEQQKKYLGRLIDEPLVA 571
G G E +V +E++ S L ++ GN+ Q++KYL +LI +
Sbjct: 102 G-LGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIG 160
Query: 572 AYGVTEPGAGSDVAGIKTR 628
A ++EP AGSDV +K +
Sbjct: 161 ALAMSEPNAGSDVVSMKLK 179
>BC017202-1|AAH17202.1| 423|Homo sapiens isovaleryl Coenzyme A
dehydrogenase protein.
Length = 423
Score = 61.3 bits (142), Expect = 3e-09
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Frame = +2
Query: 221 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYP--WPVVKKAWEVGLMNGHIPEHCGGI 394
L++EQ+ L++ KF ++ + P A + D++ E+ K+ +G++ P GG
Sbjct: 42 LSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGS 101
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXS-LGQTPIIIAGNKEQQKKYLGRLIDEPLVA 571
G G E +V +E++ S L ++ GN+ Q++KYL +LI +
Sbjct: 102 G-LGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIG 160
Query: 572 AYGVTEPGAGSDVAGIKTR 628
A ++EP AGSDV +K +
Sbjct: 161 ALAMSEPNAGSDVVSMKLK 179
>AF191218-1|AAF20182.1| 423|Homo sapiens isovaleryl dehydrogenase
protein.
Length = 423
Score = 61.3 bits (142), Expect = 3e-09
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Frame = +2
Query: 221 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYP--WPVVKKAWEVGLMNGHIPEHCGGI 394
L++EQ+ L++ KF ++ + P A + D++ E+ K+ +G++ P GG
Sbjct: 42 LSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGS 101
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXS-LGQTPIIIAGNKEQQKKYLGRLIDEPLVA 571
G G E +V +E++ S L ++ GN+ Q++KYL +LI +
Sbjct: 102 G-LGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIG 160
Query: 572 AYGVTEPGAGSDVAGIKTR 628
A ++EP AGSDV +K +
Sbjct: 161 ALAMSEPNAGSDVVSMKLK 179
>BC013354-1|AAH13354.1| 621|Homo sapiens acyl-Coenzyme A
dehydrogenase family, member 9 protein.
Length = 621
Score = 60.9 bits (141), Expect = 4e-09
Identities = 37/123 (30%), Positives = 64/123 (52%)
Frame = +2
Query: 260 KFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGVFEECIVADEL 439
KF +E+ + + D+ G+ P ++K +GL +PE GG+G F + + +
Sbjct: 76 KFFTEEVD--SRKIDQEGKIPDETLEKLKSLGLFGLQVPEEYGGLG-FSNTMYSRLGEII 132
Query: 440 AFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGI 619
+ ++G II+AG +EQ+ KYL +L +AA+ +TEP +GSD A I
Sbjct: 133 SMDGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASI 192
Query: 620 KTR 628
++R
Sbjct: 193 RSR 195
>BC007970-1|AAH07970.1| 621|Homo sapiens acyl-Coenzyme A
dehydrogenase family, member 9 protein.
Length = 621
Score = 60.9 bits (141), Expect = 4e-09
Identities = 37/123 (30%), Positives = 64/123 (52%)
Frame = +2
Query: 260 KFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGVFEECIVADEL 439
KF +E+ + + D+ G+ P ++K +GL +PE GG+G F + + +
Sbjct: 76 KFFTEEVD--SRKIDQEGKIPDETLEKLKSLGLFGLQVPEEYGGLG-FSNTMYSRLGEII 132
Query: 440 AFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGI 619
+ ++G II+AG +EQ+ KYL +L +AA+ +TEP +GSD A I
Sbjct: 133 SMDGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASI 192
Query: 620 KTR 628
++R
Sbjct: 193 RSR 195
>BC001964-1|AAH01964.1| 415|Homo sapiens acyl-Coenzyme A
dehydrogenase family, member 8 protein.
Length = 415
Score = 60.9 bits (141), Expect = 4e-09
Identities = 39/135 (28%), Positives = 65/135 (48%)
Frame = +2
Query: 221 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGN 400
L +EQK Q++A F E+ P ++D+ +P V++KA ++G +I GG G
Sbjct: 41 LNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSG- 99
Query: 401 FGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYG 580
+ ++ + LA ++ I GN+EQ+ K+ L A+Y
Sbjct: 100 LSRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYC 159
Query: 581 VTEPGAGSDVAGIKT 625
+TEPG+GSD A + T
Sbjct: 160 LTEPGSGSDAASLLT 174
>AK024012-1|BAB14775.1| 621|Homo sapiens protein ( Homo sapiens
cDNA FLJ13950 fis, clone Y79AA1001048, weakly similar to
ACYL-COA DEHYDROGENASE, VERY-LONG-CHAIN SPECIFIC
PRECURSOR (EC ).
Length = 621
Score = 60.9 bits (141), Expect = 4e-09
Identities = 37/123 (30%), Positives = 64/123 (52%)
Frame = +2
Query: 260 KFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGVFEECIVADEL 439
KF +E+ + + D+ G+ P ++K +GL +PE GG+G F + + +
Sbjct: 76 KFFTEEVD--SRKIDQEGKIPDETLEKLKSLGLFGLQVPEEYGGLG-FSNTMYSRLGEII 132
Query: 440 AFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGI 619
+ ++G II+AG +EQ+ KYL +L +AA+ +TEP +GSD A I
Sbjct: 133 SMDGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASI 192
Query: 620 KTR 628
++R
Sbjct: 193 RSR 195
>AK000359-1|BAA91109.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ20352 fis, clone HEP14524. ).
Length = 415
Score = 60.9 bits (141), Expect = 4e-09
Identities = 39/135 (28%), Positives = 65/135 (48%)
Frame = +2
Query: 221 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGN 400
L +EQK Q++A F E+ P ++D+ +P V++KA ++G +I GG G
Sbjct: 41 LNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSG- 99
Query: 401 FGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYG 580
+ ++ + LA ++ I GN+EQ+ K+ L A+Y
Sbjct: 100 LSRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYC 159
Query: 581 VTEPGAGSDVAGIKT 625
+TEPG+GSD A + T
Sbjct: 160 LTEPGSGSDAASLLT 174
>AF327351-1|AAL56011.1| 621|Homo sapiens very-long-chain acyl-CoA
dehydrogenase VLCAD protein.
Length = 621
Score = 60.9 bits (141), Expect = 4e-09
Identities = 37/123 (30%), Positives = 64/123 (52%)
Frame = +2
Query: 260 KFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGVFEECIVADEL 439
KF +E+ + + D+ G+ P ++K +GL +PE GG+G F + + +
Sbjct: 76 KFFTEEVD--SRKIDQEGKIPDETLEKLKSLGLFGLQVPEEYGGLG-FSNTMYSRLGEII 132
Query: 440 AFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGI 619
+ ++G II+AG +EQ+ KYL +L +AA+ +TEP +GSD A I
Sbjct: 133 SMDGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASI 192
Query: 620 KTR 628
++R
Sbjct: 193 RSR 195
>AF260689-1|AAF97922.1| 415|Homo sapiens acyl-CoA dehydrogenase 8
protein.
Length = 415
Score = 60.9 bits (141), Expect = 4e-09
Identities = 39/135 (28%), Positives = 65/135 (48%)
Frame = +2
Query: 221 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGN 400
L +EQK Q++A F E+ P ++D+ +P V++KA ++G +I GG G
Sbjct: 41 LNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSG- 99
Query: 401 FGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYG 580
+ ++ + LA ++ I GN+EQ+ K+ L A+Y
Sbjct: 100 LSRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYC 159
Query: 581 VTEPGAGSDVAGIKT 625
+TEPG+GSD A + T
Sbjct: 160 LTEPGSGSDAASLLT 174
>AF126245-1|AAF12736.1| 415|Homo sapiens acyl-Coenzyme A
dehydrogenase-8 precursor protein.
Length = 415
Score = 60.9 bits (141), Expect = 4e-09
Identities = 39/135 (28%), Positives = 65/135 (48%)
Frame = +2
Query: 221 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGN 400
L +EQK Q++A F E+ P ++D+ +P V++KA ++G +I GG G
Sbjct: 41 LNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSG- 99
Query: 401 FGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYG 580
+ ++ + LA ++ I GN+EQ+ K+ L A+Y
Sbjct: 100 LSRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYC 159
Query: 581 VTEPGAGSDVAGIKT 625
+TEPG+GSD A + T
Sbjct: 160 LTEPGSGSDAASLLT 174
>AB209427-1|BAD92664.1| 274|Homo sapiens acyl-Coenzyme A
dehydrogenase family, member 9 variant protein.
Length = 274
Score = 60.9 bits (141), Expect = 4e-09
Identities = 37/123 (30%), Positives = 64/123 (52%)
Frame = +2
Query: 260 KFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGVFEECIVADEL 439
KF +E+ + + D+ G+ P ++K +GL +PE GG+G F + + +
Sbjct: 26 KFFTEEVD--SRKIDQEGKIPDETLEKLKSLGLFGLQVPEEYGGLG-FSNTMYSRLGEII 82
Query: 440 AFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGI 619
+ ++G II+AG +EQ+ KYL +L +AA+ +TEP +GSD A I
Sbjct: 83 SMDGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASI 142
Query: 620 KTR 628
++R
Sbjct: 143 RSR 145
>U12778-1|AAA74424.1| 432|Homo sapiens acyl-CoA dehydrogenase
protein.
Length = 432
Score = 56.0 bits (129), Expect = 1e-07
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = +2
Query: 224 TDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNF 403
TDE+ ++ +KF +++I P+ D+ + V++ ++ GLM + GG G
Sbjct: 58 TDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTG-A 116
Query: 404 GVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYG 580
+V +ELA +L T I G +EQ+ YL +L E V ++
Sbjct: 117 SFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFC 175
Query: 581 VTEPGAGSDVAGIKTR 628
++E GAGSD +KTR
Sbjct: 176 LSEAGAGSDSFALKTR 191
>BC013756-1|AAH13756.1| 432|Homo sapiens acyl-Coenzyme A
dehydrogenase, short/branched chain protein.
Length = 432
Score = 56.0 bits (129), Expect = 1e-07
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = +2
Query: 224 TDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNF 403
TDE+ ++ +KF +++I P+ D+ + V++ ++ GLM + GG G
Sbjct: 58 TDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTG-A 116
Query: 404 GVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYG 580
+V +ELA +L T I G +EQ+ YL +L E V ++
Sbjct: 117 SFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFC 175
Query: 581 VTEPGAGSDVAGIKTR 628
++E GAGSD +KTR
Sbjct: 176 LSEAGAGSDSFALKTR 191
>AL831821-1|CAD38535.2| 427|Homo sapiens hypothetical protein
protein.
Length = 427
Score = 56.0 bits (129), Expect = 1e-07
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = +2
Query: 224 TDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNF 403
TDE+ ++ +KF +++I P+ D+ + V++ ++ GLM + GG G
Sbjct: 53 TDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTG-A 111
Query: 404 GVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYG 580
+V +ELA +L T I G +EQ+ YL +L E V ++
Sbjct: 112 SFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFC 170
Query: 581 VTEPGAGSDVAGIKTR 628
++E GAGSD +KTR
Sbjct: 171 LSEAGAGSDSFALKTR 186
>AL731666-2|CAI10847.1| 432|Homo sapiens acyl-Coenzyme A
dehydrogenase, short/branched chain protein.
Length = 432
Score = 56.0 bits (129), Expect = 1e-07
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = +2
Query: 224 TDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNF 403
TDE+ ++ +KF +++I P+ D+ + V++ ++ GLM + GG G
Sbjct: 58 TDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTG-A 116
Query: 404 GVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYG 580
+V +ELA +L T I G +EQ+ YL +L E V ++
Sbjct: 117 SFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFC 175
Query: 581 VTEPGAGSDVAGIKTR 628
++E GAGSD +KTR
Sbjct: 176 LSEAGAGSDSFALKTR 191
>AF260678-1|AAF97921.1| 432|Homo sapiens short/branched chain
acyl-CoA dehydrogenase protein.
Length = 432
Score = 56.0 bits (129), Expect = 1e-07
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = +2
Query: 224 TDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNF 403
TDE+ ++ +KF +++I P+ D+ + V++ ++ GLM + GG G
Sbjct: 58 TDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTG-A 116
Query: 404 GVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYG 580
+V +ELA +L T I G +EQ+ YL +L E V ++
Sbjct: 117 SFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFC 175
Query: 581 VTEPGAGSDVAGIKTR 628
++E GAGSD +KTR
Sbjct: 176 LSEAGAGSDSFALKTR 191
>AB209538-1|BAD92775.1| 263|Homo sapiens acyl-Coenzyme A
dehydrogenase family, member 8 variant protein.
Length = 263
Score = 52.8 bits (121), Expect = 1e-06
Identities = 35/127 (27%), Positives = 60/127 (47%)
Frame = +2
Query: 245 QELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGVFEECI 424
Q++A F E+ P ++D+ +P V++KA ++G +I GG G + +
Sbjct: 1 QKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSG-LSRLDTSV 59
Query: 425 VADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGS 604
+ + LA ++ I GN+EQ+ K+ L A+Y +TEPG+GS
Sbjct: 60 IFEALATGCTSTTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGS 119
Query: 605 DVAGIKT 625
D A + T
Sbjct: 120 DAASLLT 126
>X86556-1|CAA60253.1| 655|Homo sapiens very-long-chain acyl-CoA
dehydrogenase protein.
Length = 655
Score = 50.4 bits (115), Expect = 5e-06
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQ-YDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 394
E T K L E +F ++ P + E W +K E+G +P GG+
Sbjct: 97 EQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLK---ELGAFGLQVPSELGGV 153
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
G +V S+G I++ G K Q++KYL +L VAA
Sbjct: 154 GLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAA 213
Query: 575 YGVTEPGAGSDVAGIKT 625
+ +TEP +GSD A I+T
Sbjct: 214 FCLTEPSSGSDAASIRT 230
>L46590-1|AAA79002.1| 655|Homo sapiens long chain acyl-CoA
dehydrogenase protein.
Length = 655
Score = 50.4 bits (115), Expect = 5e-06
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQ-YDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 394
E T K L E +F ++ P + E W +K E+G +P GG+
Sbjct: 97 EQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLK---ELGAFGLQVPSELGGV 153
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
G +V S+G I++ G K Q++KYL +L VAA
Sbjct: 154 GLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAA 213
Query: 575 YGVTEPGAGSDVAGIKT 625
+ +TEP +GSD A I+T
Sbjct: 214 FCLTEPSSGSDAASIRT 230
>D43682-1|BAA07781.1| 655|Homo sapiens VLACD protein.
Length = 655
Score = 50.4 bits (115), Expect = 5e-06
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQ-YDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 394
E T K L E +F ++ P + E W +K E+G +P GG+
Sbjct: 97 EQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLK---ELGAFGLQVPSELGGV 153
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
G +V S+G I++ G K Q++KYL +L VAA
Sbjct: 154 GLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAA 213
Query: 575 YGVTEPGAGSDVAGIKT 625
+ +TEP +GSD A I+T
Sbjct: 214 FCLTEPSSGSDAASIRT 230
>BC020218-1|AAH20218.1| 633|Homo sapiens acyl-Coenzyme A
dehydrogenase, very long chain protein.
Length = 633
Score = 50.4 bits (115), Expect = 5e-06
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQ-YDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 394
E T K L E +F ++ P + E W +K E+G +P GG+
Sbjct: 75 EQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLK---ELGAFGLQVPSELGGV 131
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
G +V S+G I++ G K Q++KYL +L VAA
Sbjct: 132 GLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAA 191
Query: 575 YGVTEPGAGSDVAGIKT 625
+ +TEP +GSD A I+T
Sbjct: 192 FCLTEPSSGSDAASIRT 208
>BC012912-1|AAH12912.1| 655|Homo sapiens acyl-Coenzyme A
dehydrogenase, very long chain protein.
Length = 655
Score = 50.4 bits (115), Expect = 5e-06
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQ-YDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 394
E T K L E +F ++ P + E W +K E+G +P GG+
Sbjct: 97 EQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLK---ELGAFGLQVPSELGGV 153
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
G +V S+G I++ G K Q++KYL +L VAA
Sbjct: 154 GLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAA 213
Query: 575 YGVTEPGAGSDVAGIKT 625
+ +TEP +GSD A I+T
Sbjct: 214 FCLTEPSSGSDAASIRT 230
>BC000399-1|AAH00399.1| 655|Homo sapiens acyl-Coenzyme A
dehydrogenase, very long chain protein.
Length = 655
Score = 50.4 bits (115), Expect = 5e-06
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQ-YDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 394
E T K L E +F ++ P + E W +K E+G +P GG+
Sbjct: 97 EQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLK---ELGAFGLQVPSELGGV 153
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
G +V S+G I++ G K Q++KYL +L VAA
Sbjct: 154 GLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAA 213
Query: 575 YGVTEPGAGSDVAGIKT 625
+ +TEP +GSD A I+T
Sbjct: 214 FCLTEPSSGSDAASIRT 230
>AK222518-1|BAD96238.1| 655|Homo sapiens acyl-Coenzyme A
dehydrogenase, very long chain precursor variant
protein.
Length = 655
Score = 50.4 bits (115), Expect = 5e-06
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQ-YDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 394
E T K L E +F ++ P + E W +K E+G +P GG+
Sbjct: 97 EQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLK---ELGAFGLQVPSELGGV 153
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
G +V S+G I++ G K Q++KYL +L VAA
Sbjct: 154 GLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAA 213
Query: 575 YGVTEPGAGSDVAGIKT 625
+ +TEP +GSD A I+T
Sbjct: 214 FCLTEPSSGSDAASIRT 230
>U69141-1|AAB08455.1| 438|Homo sapiens glutaryl-CoA dehydrogenase
protein.
Length = 438
Score = 50.0 bits (114), Expect = 7e-06
Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGI 394
+LT ++ +++ R + ++ ++P ++ + ++ + E+G++ I + C G+
Sbjct: 59 QLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGV 118
Query: 395 GNFGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVA 571
+ ++A EL SL PI G++EQ++KYL +L L+
Sbjct: 119 SSVAYG---LLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLG 175
Query: 572 AYGVTEPGAGSDVAGIKTR 628
+G+TEP +GSD + ++TR
Sbjct: 176 CFGLTEPNSGSDPSSMETR 194
>BT006706-1|AAP35352.1| 438|Homo sapiens glutaryl-Coenzyme A
dehydrogenase protein.
Length = 438
Score = 50.0 bits (114), Expect = 7e-06
Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGI 394
+LT ++ +++ R + ++ ++P ++ + ++ + E+G++ I + C G+
Sbjct: 59 QLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGV 118
Query: 395 GNFGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVA 571
+ ++A EL SL PI G++EQ++KYL +L L+
Sbjct: 119 SSVAYG---LLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLG 175
Query: 572 AYGVTEPGAGSDVAGIKTR 628
+G+TEP +GSD + ++TR
Sbjct: 176 CFGLTEPNSGSDPSSMETR 194
>BC002579-1|AAH02579.1| 438|Homo sapiens glutaryl-Coenzyme A
dehydrogenase protein.
Length = 438
Score = 50.0 bits (114), Expect = 7e-06
Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGI 394
+LT ++ +++ R + ++ ++P ++ + ++ + E+G++ I + C G+
Sbjct: 59 QLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGV 118
Query: 395 GNFGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVA 571
+ ++A EL SL PI G++EQ++KYL +L L+
Sbjct: 119 SSVAYG---LLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLG 175
Query: 572 AYGVTEPGAGSDVAGIKTR 628
+G+TEP +GSD + ++TR
Sbjct: 176 CFGLTEPNSGSDPSSMETR 194
>AF012342-1|AAC52079.1| 438|Homo sapiens glutaryl-CoA dehydrogenase
protein.
Length = 438
Score = 50.0 bits (114), Expect = 7e-06
Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGI 394
+LT ++ +++ R + ++ ++P ++ + ++ + E+G++ I + C G+
Sbjct: 59 QLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGV 118
Query: 395 GNFGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVA 571
+ ++A EL SL PI G++EQ++KYL +L L+
Sbjct: 119 SSVAYG---LLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLG 175
Query: 572 AYGVTEPGAGSDVAGIKTR 628
+G+TEP +GSD + ++TR
Sbjct: 176 CFGLTEPNSGSDPSSMETR 194
>AD000092-4|AAB51174.1| 438|Homo sapiens glutaryl Co-A
dehydrogenase protein.
Length = 438
Score = 50.0 bits (114), Expect = 7e-06
Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGI 394
+LT ++ +++ R + ++ ++P ++ + ++ + E+G++ I + C G+
Sbjct: 59 QLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGV 118
Query: 395 GNFGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVA 571
+ ++A EL SL PI G++EQ++KYL +L L+
Sbjct: 119 SSVAYG---LLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLG 175
Query: 572 AYGVTEPGAGSDVAGIKTR 628
+G+TEP +GSD + ++TR
Sbjct: 176 CFGLTEPNSGSDPSSMETR 194
>AK022568-1|BAB14104.1| 498|Homo sapiens protein ( Homo sapiens
cDNA FLJ12506 fis, clone NT2RM2001700, weakly similar to
ACYL-COA DEHYDROGENASE, VERY-LONG-CHAIN SPECIFIC (EC
1.3.99.-). ).
Length = 498
Score = 48.4 bits (110), Expect = 2e-05
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +2
Query: 482 SLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTR 628
++G II+AG +EQ+ KYL +L +AA+ +TEP +GSD A I++R
Sbjct: 24 AIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASIRSR 72
>D78298-1|BAA29057.1| 655|Homo sapiens very-long-chain acyl-CoA
dehydrogenase protein.
Length = 655
Score = 46.8 bits (106), Expect = 6e-05
Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQ-YDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 394
E T K L E +F ++ P + E W +K E+G +P GG+
Sbjct: 97 EQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLK---ELGAFGLQVPSELGGV 153
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
G +V S+G I++ K Q++KYL +L VAA
Sbjct: 154 GLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFCTKAQKEKYLPKLASGETVAA 213
Query: 575 YGVTEPGAGSDVAGIKT 625
+ +TEP +GSD A I+T
Sbjct: 214 FCLTEPSSGSDAASIRT 230
>AL731666-1|CAI10846.1| 170|Homo sapiens acyl-Coenzyme A
dehydrogenase, short/branched chain protein.
Length = 170
Score = 38.3 bits (85), Expect = 0.022
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +2
Query: 224 TDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNF 403
TDE+ ++ +KF +++I P+ D+ + V++ ++ GLM + GG G
Sbjct: 63 TDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTG-A 121
Query: 404 GVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYL 541
+V +ELA +L T I G +EQ+ YL
Sbjct: 122 SFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYL 168
>AK125373-1|BAC86149.1| 141|Homo sapiens protein ( Homo sapiens
cDNA FLJ43383 fis, clone OCBBF2006058, highly similar
to Homo sapiens acyl-Coenzyme A dehydrogenase-8
precursor mRNA. ).
Length = 141
Score = 36.7 bits (81), Expect = 0.067
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 512 GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKT 625
GN+EQ+ K+ L A+Y +TEPG+GSD A + T
Sbjct: 10 GNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLT 47
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 35.1 bits (77), Expect = 0.21
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P+ P P P+ S S+ +S +PK+ P P S P PTS + T YS
Sbjct: 1809 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 1868
Query: 312 P 310
P
Sbjct: 1869 P 1869
Score = 33.5 bits (73), Expect = 0.63
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Frame = -2
Query: 615 PATSDP-APGSVTP*AATNGSSISLPRYFFCCSLF-PAIMMGVCPKDV---PPIAVVMPV 451
P P +PG +P + G ++S P Y + P G P+ P P
Sbjct: 1567 PTPGSPGSPGPSSPYIPSPGGAMS-PSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPT 1625
Query: 450 HPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 286
P+ S ++ +S +P + P P S P PTS ++ T YSP SY P +
Sbjct: 1626 SPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Score = 33.1 bits (72), Expect = 0.83
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P S P PTS ++ T YS
Sbjct: 1641 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1700
Query: 312 PVL-SY*PAT 286
P SY P +
Sbjct: 1701 PTSPSYSPTS 1710
Score = 33.1 bits (72), Expect = 0.83
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P S P PTS ++ T YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 312 PVL-SY*PAT 286
P SY P +
Sbjct: 1715 PTSPSYSPTS 1724
Score = 33.1 bits (72), Expect = 0.83
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P S P PTS ++ T YS
Sbjct: 1669 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 312 PVL-SY*PAT 286
P SY P +
Sbjct: 1729 PTSPSYSPTS 1738
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 456 PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 286
P P+ S ++ +S +P + P P S P PTS ++ T YSP SY P +
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1696
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P S P PTS ++ T YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 312 P 310
P
Sbjct: 1743 P 1743
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P S P PTS ++ T YS
Sbjct: 1690 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYS 1749
Query: 312 P 310
P
Sbjct: 1750 P 1750
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
PK P P P S ++ +S +P + P P+ S P PTS + T YS
Sbjct: 1872 PKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYS 1931
Query: 312 P 310
P
Sbjct: 1932 P 1932
Score = 31.9 bits (69), Expect = 1.9
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P S P PTS ++ T YS
Sbjct: 1711 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYS 1770
Query: 312 P 310
P
Sbjct: 1771 P 1771
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 456 PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSP 310
P P+ S ++ +S +P + P P S P PTS ++ T YSP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1806
Score = 31.9 bits (69), Expect = 1.9
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S S+ ++ ++P + P P S P PTS + T YS
Sbjct: 1788 PSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYS 1847
Query: 312 P 310
P
Sbjct: 1848 P 1848
Score = 31.9 bits (69), Expect = 1.9
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P+ P P P S ++ +S +P + P P+ S P PTS + T YS
Sbjct: 1851 PEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYS 1910
Query: 312 P 310
P
Sbjct: 1911 P 1911
Score = 29.9 bits (64), Expect = 7.7
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P + P PTS ++ T Y+
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 312 P 310
P
Sbjct: 1778 P 1778
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 35.1 bits (77), Expect = 0.21
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P+ P P P+ S S+ +S +PK+ P P S P PTS + T YS
Sbjct: 1809 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 1868
Query: 312 P 310
P
Sbjct: 1869 P 1869
Score = 33.5 bits (73), Expect = 0.63
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Frame = -2
Query: 615 PATSDP-APGSVTP*AATNGSSISLPRYFFCCSLF-PAIMMGVCPKDV---PPIAVVMPV 451
P P +PG +P + G ++S P Y + P G P+ P P
Sbjct: 1567 PTPGSPGSPGPSSPYIPSPGGAMS-PSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPT 1625
Query: 450 HPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 286
P+ S ++ +S +P + P P S P PTS ++ T YSP SY P +
Sbjct: 1626 SPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1682
Score = 33.1 bits (72), Expect = 0.83
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P S P PTS ++ T YS
Sbjct: 1641 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1700
Query: 312 PVL-SY*PAT 286
P SY P +
Sbjct: 1701 PTSPSYSPTS 1710
Score = 33.1 bits (72), Expect = 0.83
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P S P PTS ++ T YS
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 312 PVL-SY*PAT 286
P SY P +
Sbjct: 1715 PTSPSYSPTS 1724
Score = 33.1 bits (72), Expect = 0.83
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P S P PTS ++ T YS
Sbjct: 1669 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 312 PVL-SY*PAT 286
P SY P +
Sbjct: 1729 PTSPSYSPTS 1738
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 456 PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 286
P P+ S ++ +S +P + P P S P PTS ++ T YSP SY P +
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1696
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P S P PTS ++ T YS
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 312 P 310
P
Sbjct: 1743 P 1743
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P S P PTS ++ T YS
Sbjct: 1690 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYS 1749
Query: 312 P 310
P
Sbjct: 1750 P 1750
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
PK P P P S ++ +S +P + P P+ S P PTS + T YS
Sbjct: 1872 PKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYS 1931
Query: 312 P 310
P
Sbjct: 1932 P 1932
Score = 31.9 bits (69), Expect = 1.9
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P S P PTS ++ T YS
Sbjct: 1711 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYS 1770
Query: 312 P 310
P
Sbjct: 1771 P 1771
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 456 PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSP 310
P P+ S ++ +S +P + P P S P PTS ++ T YSP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1806
Score = 31.9 bits (69), Expect = 1.9
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S S+ ++ ++P + P P S P PTS + T YS
Sbjct: 1788 PSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYS 1847
Query: 312 P 310
P
Sbjct: 1848 P 1848
Score = 31.9 bits (69), Expect = 1.9
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P+ P P P S ++ +S +P + P P+ S P PTS + T YS
Sbjct: 1851 PEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYS 1910
Query: 312 P 310
P
Sbjct: 1911 P 1911
Score = 29.9 bits (64), Expect = 7.7
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S ++ +S +P + P P + P PTS ++ T Y+
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 312 P 310
P
Sbjct: 1778 P 1778
>X13097-1|CAA31489.1| 291|Homo sapiens plasminogen activator
preprotein protein.
Length = 291
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>X07393-1|CAA30302.1| 562|Homo sapiens protein ( Human fetal lung
plasminogen activator (t-PA) mRNA (EC 3.4.21.31). ).
Length = 562
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>M18182-1|AAA36800.1| 562|Homo sapiens protein ( Human plasminogen
activator mRNA, complete cds. ).
Length = 562
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>M15518-1|AAA60111.1| 562|Homo sapiens tissue-type plasminogen
activator protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>L00153-1|AAB59510.1| 562|Homo sapiens plasminogen activator
protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>K03021-1|AAA98809.1| 562|Homo sapiens plasminogen activator
protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>BT007060-1|AAP35709.1| 562|Homo sapiens plasminogen activator,
tissue protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>BC095403-1|AAH95403.1| 562|Homo sapiens plasminogen activator,
tissue protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>BC018636-1|AAH18636.3| 562|Homo sapiens plasminogen activator,
tissue protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>BC013968-1|AAH13968.3| 562|Homo sapiens plasminogen activator,
tissue protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>BC007231-1|AAH07231.1| 562|Homo sapiens plasminogen activator,
tissue protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>AY291060-1|AAP34246.1| 291|Homo sapiens plasminogen activator,
tissue type isoform 2 precursor protein.
Length = 291
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>AY221101-1|AAO34406.1| 562|Homo sapiens tissue plasminogen
activator protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 355 PNERTHSRTLRGHREFWRLRRVHRSGRTCVWMYWHHDSYWGHVLRTNSHHYCW 513
P++ H+R RG R + + + R +T + +Y H S+ VLR+N YCW
Sbjct: 22 PSQEIHARFRRGARSY---QVICRDEKTQM-IYQQHQSWLRPVLRSNRVEYCW 70
>BC022033-1|AAH22033.1| 684|Homo sapiens kelch repeat and BTB (POZ)
domain containing 7 protein.
Length = 684
Score = 32.3 bits (70), Expect = 1.4
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = -2
Query: 462 VMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSPVLSY*PATG 283
++PV PN+SSS++ +S PPQ GMC + GH P L Y P +G
Sbjct: 311 LVPV-PNSSSSSSSSNSLVSAAENPPQRLGMC-----AKEMVIFFGHPRDPFLCYDPYSG 364
Query: 282 MI 277
I
Sbjct: 365 DI 366
>AL354696-3|CAI16613.1| 684|Homo sapiens kelch repeat and BTB (POZ)
domain containing 7 protein.
Length = 684
Score = 32.3 bits (70), Expect = 1.4
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = -2
Query: 462 VMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSPVLSY*PATG 283
++PV PN+SSS++ +S PPQ GMC + GH P L Y P +G
Sbjct: 311 LVPV-PNSSSSSSSSNSLVSAAENPPQRLGMC-----AKEMVIFFGHPRDPFLCYDPYSG 364
Query: 282 MI 277
I
Sbjct: 365 DI 366
>AK091344-1|BAC03641.1| 684|Homo sapiens protein ( Homo sapiens
cDNA FLJ34025 fis, clone FCBBF2003336, weakly similar to
RING CANAL PROTEIN. ).
Length = 684
Score = 32.3 bits (70), Expect = 1.4
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = -2
Query: 462 VMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSPVLSY*PATG 283
++PV PN+SSS++ +S PPQ GMC + GH P L Y P +G
Sbjct: 311 LVPV-PNSSSSSSSSNSLVSAAENPPQRLGMC-----AKEMVIFFGHPRDPFLCYDPYSG 364
Query: 282 MI 277
I
Sbjct: 365 DI 366
>U66616-1|AAC50694.1| 1213|Homo sapiens SWI/SNF complex 170 KDa
subunit protein.
Length = 1213
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -2
Query: 615 PATSDPAPGSVTP*AATNGSSISLPRYFFCCSLFPA-IMMGVCPKDVPPIAVVMPVHPNA 439
P PAP + + + SI+LP P+ + G P P+++ P+HPN
Sbjct: 1087 PPPPPPAPSIIPFGSLADSISINLPAPPNLMGSPPSPVRPGTLPPPNLPVSMANPLHPNL 1146
Query: 438 SSSATMHSS 412
++ TM SS
Sbjct: 1147 PATTTMPSS 1155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,788,691
Number of Sequences: 237096
Number of extensions: 1908659
Number of successful extensions: 5100
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 4722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5031
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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