Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11i08
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 145 2e-35
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 136 1e-32
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 133 9e-32
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 73 1e-13
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 66 1e-11
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 64 6e-11
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 64 6e-11
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 51 8e-07
U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 50 1e-06
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 50 2e-06
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 49 2e-06
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 48 7e-06
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z99710-5|CAB16866.1| 662|Caenorhabditis elegans Hypothetical pr... 34 0.072
Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical pr... 34 0.096
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 32 0.39
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 32 0.39
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 31 0.89
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 31 0.89
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 30 1.6
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 28 6.3
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 28 6.3
U23179-2|AAK68207.1| 345|Caenorhabditis elegans Serpentine rece... 28 6.3
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 145 bits (352), Expect = 2e-35
Identities = 67/143 (46%), Positives = 93/143 (65%)
Frame = +2
Query: 200 TTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPE 379
+TG F+LT +Q + RKF DE+IPVAG+YDKT EYPW ++KKA G + IPE
Sbjct: 21 STGMDFQLTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPE 80
Query: 380 HCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDE 559
GG+G + CI+++E+A+ L TP+I+ N + +K++LGR+ID
Sbjct: 81 AYGGLG-VDMVSNCIISEEMAYGCSGIATAIMANDLALTPLILCANDDIKKRFLGRMIDN 139
Query: 560 PLVAAYGVTEPGAGSDVAGIKTR 628
P VA+Y VTEPGAGSDVAG+KT+
Sbjct: 140 PFVASYAVTEPGAGSDVAGVKTK 162
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 136 bits (329), Expect = 1e-32
Identities = 62/138 (44%), Positives = 93/138 (67%)
Frame = +2
Query: 215 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 394
F+L++ QK +Q+ A KF+KD ++P A ++D++GE+PW +V++A +GLMN IPE GG
Sbjct: 29 FDLSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGP 88
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
G E ++ + L++ SL P+ I+GN+EQ+KKYLG L EP++A+
Sbjct: 89 G-MTTLETALIVEALSYGCTGIQLGIMGPSLAIAPVYISGNEEQKKKYLGALAAEPIIAS 147
Query: 575 YGVTEPGAGSDVAGIKTR 628
Y VTEPGAGSDV G+KT+
Sbjct: 148 YCVTEPGAGSDVNGVKTK 165
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 133 bits (322), Expect = 9e-32
Identities = 63/138 (45%), Positives = 90/138 (65%)
Frame = +2
Query: 215 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 394
FEL+D QK +Q A KF+KD ++P A ++DK+GE+PW +VK+A +G MN IPE GG
Sbjct: 23 FELSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYGGP 82
Query: 395 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 574
G + ++ + L++ SL PI ++G +EQ+KKYLG L EP++A+
Sbjct: 83 G-LSNLDTALIVEALSYGCSGLQIAIFGPSLAAAPICLSGTEEQKKKYLGMLAAEPIIAS 141
Query: 575 YGVTEPGAGSDVAGIKTR 628
Y VTEPGAGSDV G+KT+
Sbjct: 142 YCVTEPGAGSDVNGVKTK 159
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 73.3 bits (172), Expect = 1e-13
Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Frame = +2
Query: 221 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGN 400
LT+ + + RKF+KD + P+ + DK + V + +E GLM H+PE GG G+
Sbjct: 48 LTENELFFADTVRKFSKDVVKPLVREMDKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGS 107
Query: 401 FGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAY 577
F IV +ELA +L + II G +EQ+ KYL RL + L A++
Sbjct: 108 -SFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKYLPRLCSDSL-ASF 165
Query: 578 GVTEPGAGSDVAGIKT 625
++E GAGSD +KT
Sbjct: 166 CISESGAGSDAFALKT 181
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 66.5 bits (155), Expect = 1e-11
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 397
+L++E+ ++ R+F + I P+ + D + V+ +E GLM IPE GG G
Sbjct: 39 QLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQMHQSVITGTFENGLMGIEIPEKYGGPG 98
Query: 398 NFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIII-AGNKEQQKKYLGRLIDEPLVAA 574
+ F+ +V +ELA + P+II G +EQ++KYL +++ E + +
Sbjct: 99 S-SFFDAVLVIEELAKVDPSVSVFVDVQNTLVAPLIIQLGTEEQKQKYLPKIVTE-AIGS 156
Query: 575 YGVTEPGAGSDVAGIKT 625
+ ++E G+GSD +KT
Sbjct: 157 FALSETGSGSDAFALKT 173
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 64.5 bits (150), Expect = 6e-11
Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Frame = +2
Query: 197 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 370
P F L DE+ AL++ R+F E+ P A + DK + P KK + GL+
Sbjct: 31 PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90
Query: 371 IPEHCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXS-LGQTPIIIAGNKEQQKKYLGR 547
P GG G F I +EL+ S L I+ G++EQ+KKYL +
Sbjct: 91 APAEYGGSG-MNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPK 149
Query: 548 LIDEPLVAAYGVTEPGAGSDVAGIKTR 628
LI + A ++E AGSDV +K R
Sbjct: 150 LISGEHMGALAMSEAQAGSDVVSMKLR 176
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 64.5 bits (150), Expect = 6e-11
Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Frame = +2
Query: 197 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 370
P F L DE+ AL++ R+F E+ P A + DK + P KK + GL+
Sbjct: 31 PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90
Query: 371 IPEHCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXS-LGQTPIIIAGNKEQQKKYLGR 547
P GG G F I +EL+ S L I+ G++EQ+KKYL +
Sbjct: 91 APAEYGGSG-MNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPK 149
Query: 548 LIDEPLVAAYGVTEPGAGSDVAGIKTR 628
LI + A ++E AGSDV +K R
Sbjct: 150 LISGEHMGALAMSEAQAGSDVVSMKLR 176
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 50.8 bits (116), Expect = 8e-07
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = +2
Query: 221 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGN 400
L + +K L E + F + + P+ + D+ ++KKA+++ LM I GG G
Sbjct: 36 LNENEKKLVEKVKNFAQSSVKPLVREMDRDARINKQLLKKAFDLKLMGLKIDPKYGGSG- 94
Query: 401 FGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIA-GNKEQQKKYLGRLIDEPLVAAY 577
FE + +EL+ + P+I GN+E ++KYL +L + V A+
Sbjct: 95 VSFFELVLAVEELSKIDPAIALIMHLQNALVAPLIEEFGNEELKEKYLKKLCKDS-VGAF 153
Query: 578 GVTEPGAGSDVAGIKT 625
++E +GSD ++T
Sbjct: 154 ALSEVVSGSDAFAMQT 169
>U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical
protein E04F6.5b protein.
Length = 408
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Frame = +2
Query: 221 LTDEQKALQELARKFTKDEIIPVAG--QYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 394
+TDEQK + + ++ V + D+T + P V+ + E+G +P G
Sbjct: 63 MTDEQKETLGMVMSPLEKMLVEVNDVVKNDETSDIPRAVLDQFAELGTFGVLVPPELEGS 122
Query: 395 GNFGVFEECIVADEL-AFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVA 571
G F + VA+ + A+ S+G I++ G Q++KYL L A
Sbjct: 123 G-FNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQKQKYLPDLATGRKFA 181
Query: 572 AYGVTEPGAGSDVAGIKTR 628
A+ +TEP GSD + ++TR
Sbjct: 182 AFALTEPTTGSDASSVRTR 200
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Frame = +2
Query: 221 LTDEQKALQELARKFTKDEIIPVAG--QYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 394
+TDEQK + + ++ V + D+T + P V+ + E+G +P G
Sbjct: 63 MTDEQKETLGMVMSPLEKMLVEVNDVVKNDETSDIPRAVLDQFAELGTFGVLVPPELEGS 122
Query: 395 GNFGVFEECIVADEL-AFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVA 571
G F + VA+ + A+ S+G I++ G Q++KYL L A
Sbjct: 123 G-FNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQKQKYLPDLATGRKFA 181
Query: 572 AYGVTEPGAGSDVAGIKTR 628
A+ +TEP GSD + ++TR
Sbjct: 182 AFALTEPTTGSDASSVRTR 200
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 50.0 bits (114), Expect = 1e-06
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Frame = +2
Query: 239 ALQELARKFTKDEIIPVAGQYDKTGEYPWPVV-KKAWEVGLMNGHIPEHCGGIGNFGVFE 415
A+Q K K++I P Q++K+G YP V K ++G+ + P GG G
Sbjct: 31 AMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTGRDFAMS 90
Query: 416 ECIVADELAFXXXXXXXXXXXXSLGQTPIIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEP 592
I A S TP + G+ + ++L I+ LV++ V+EP
Sbjct: 91 IAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFLRPSINGDLVSSIAVSEP 150
Query: 593 GAGSDVAGIKT 625
AGSDV+ I+T
Sbjct: 151 HAGSDVSAIRT 161
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +2
Query: 359 MNGHIPEHCGGIGNFGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKK 535
M H+PE GG G+ F IV +ELA +L + II G +EQ+ K
Sbjct: 1 MGVHVPEEYGGSGS-SFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLK 59
Query: 536 YLGRLIDEPLVAAYGVTEPGAGSDVAGIKT 625
YL RL + L A++ ++E GAGSD +KT
Sbjct: 60 YLPRLCSDSL-ASFCISESGAGSDAFALKT 88
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 49.2 bits (112), Expect = 2e-06
Identities = 33/126 (26%), Positives = 57/126 (45%)
Frame = +2
Query: 248 ELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGVFEECIV 427
E A +F K E+ P +DK GE P V++KA E+G + GG G ++
Sbjct: 36 EAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDHGGSG-LSRLHASVI 94
Query: 428 ADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSD 607
++L+ ++ + G ++ ++ L + + +Y +TEP AGSD
Sbjct: 95 FEQLSMGCVSTAAYISIHNMCAWMLDTYGPEKLKEDLLPDMAVFKKLGSYCLTEPDAGSD 154
Query: 608 VAGIKT 625
A I+T
Sbjct: 155 AASIRT 160
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 48.0 bits (109), Expect = 5e-06
Identities = 31/139 (22%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Frame = +2
Query: 218 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGI 394
+LT+++++L AR++ ++ ++P + +T ++ ++ + +GL+ + C G
Sbjct: 31 QLTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLGAPYQGYGCAGT 90
Query: 395 GNFGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVA 571
G ++A E+ SL PI G+++Q++KY+ L +
Sbjct: 91 STVGYG---LIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASGKKIG 147
Query: 572 AYGVTEPGAGSDVAGIKTR 628
+G+TEP GS+ G++T+
Sbjct: 148 CFGLTEPNHGSNPGGMETK 166
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 47.6 bits (108), Expect = 7e-06
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +2
Query: 302 DKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGVFEECIVADELAFXXXXXXXXXXXX 481
D+T E V+ +E GLM +PE GG G F+ +V +E++
Sbjct: 2 DRTSEMTPAVINGCFENGLMGIEVPEKYGGPG-ATFFDAALVIEEISKVDASVGAMVDVH 60
Query: 482 SLGQTPIII-AGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKT 625
+ P+II G ++Q++KYL + V ++ ++E G+GSD +KT
Sbjct: 61 NTLFIPLIIELGTEKQKEKYLPKCYTSS-VGSFALSETGSGSDAFALKT 108
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 42.3 bits (95), Expect = 3e-04
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Frame = +2
Query: 242 LQELARKFTKDEIIPVAGQYDKTGEYPWPVV-KKAWEVGLMNGHIPEHCGGIGNFGVFEE 418
+Q+ K +++I P ++++ G YP +V K + G+ + PE GG G
Sbjct: 66 MQKSLGKLIEEKINPNVAKWEQDGRYPAHLVFKMLGDHGVFGVNKPEAFGGTGTDIAMAT 125
Query: 419 CIVADELAFXXXXXXXXXXXXSLGQTPIIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPG 595
I A + TP + G+ ++++L I LV++ V+EP
Sbjct: 126 AIAEQMGAINCGSIPMSVMVQTDMSTPALAQFGSDALRERFLRPSITGDLVSSLAVSEPH 185
Query: 596 AGSDVAGIKT 625
AGSDV+ + T
Sbjct: 186 AGSDVSAVHT 195
>Z99710-5|CAB16866.1| 662|Caenorhabditis elegans Hypothetical
protein F08A8.4 protein.
Length = 662
Score = 34.3 bits (75), Expect = 0.072
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +2
Query: 500 IIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKT 625
++ +KEQQ+K+LGR ++ Y TE G G+++ ++T
Sbjct: 123 LVSQASKEQQEKWLGRARRREIIGCYAQTEMGHGTNLRKLET 164
>Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical
protein F08A8.3 protein.
Length = 660
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 497 PIIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKT 625
P ++A ++EQQ+K+LGR + ++ Y TE G G+++ ++T
Sbjct: 119 PTLVAQASQEQQEKWLGRARRKEIIGCYAQTEMGHGTNLRKLET 162
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -2
Query: 498 GVCPKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHG 319
GV P ++ P + S S + S + P+ P S P PTS ++ T
Sbjct: 1573 GVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPS 1632
Query: 318 YSPVL-SY*PAT 286
YSP SY P +
Sbjct: 1633 YSPTSPSYSPTS 1644
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -2
Query: 456 PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 286
P P+ S ++ +S +P + P P S P PTS ++ + YSP SY P++
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1672
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/104 (25%), Positives = 38/104 (36%)
Frame = -2
Query: 621 FIPATSDPAPGSVTP*AATNGSSISLPRYFFCCSLFPAIMMGVCPKDVPPIAVVMPVHPN 442
+ P + +P S + ++ S S PRY S P P P P
Sbjct: 1647 YSPTSPSYSPSSPSYSPSSPSYSPSSPRY----SPTSPTYSPTSPTYSPTSPTYSPTSPT 1702
Query: 441 ASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSP 310
S ++ + S P P+ S P PTS ++ T YSP
Sbjct: 1703 YSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSP 1746
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -2
Query: 456 PVHPNASSS--ATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PA 289
P P A S + +S +P + P P S P PTS ++ T YSP SY P+
Sbjct: 1598 PTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1657
Query: 288 T 286
+
Sbjct: 1658 S 1658
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S +S +PK+ P P S P PTS + T YS
Sbjct: 1694 PTYSPTSPTYSPTSPSYESGGG-YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYS 1752
Query: 312 P 310
P
Sbjct: 1753 P 1753
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSP 310
P+ P P P + S+ ++ +P+ PQ S P PTS ++ + YSP
Sbjct: 1742 PQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSP 1801
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 456 PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSP 310
P P S S+ +S +P + P PQ S P P+S + + Y+P
Sbjct: 1718 PSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNP 1767
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -2
Query: 498 GVCPKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHG 319
GV P ++ P + S S + S + P+ P S P PTS ++ T
Sbjct: 1580 GVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPS 1639
Query: 318 YSPVL-SY*PAT 286
YSP SY P +
Sbjct: 1640 YSPTSPSYSPTS 1651
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -2
Query: 456 PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 286
P P+ S ++ +S +P + P P S P PTS ++ + YSP SY P++
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1679
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/104 (25%), Positives = 38/104 (36%)
Frame = -2
Query: 621 FIPATSDPAPGSVTP*AATNGSSISLPRYFFCCSLFPAIMMGVCPKDVPPIAVVMPVHPN 442
+ P + +P S + ++ S S PRY S P P P P
Sbjct: 1654 YSPTSPSYSPSSPSYSPSSPSYSPSSPRY----SPTSPTYSPTSPTYSPTSPTYSPTSPT 1709
Query: 441 ASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSP 310
S ++ + S P P+ S P PTS ++ T YSP
Sbjct: 1710 YSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSP 1753
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -2
Query: 456 PVHPNASSS--ATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PA 289
P P A S + +S +P + P P S P PTS ++ T YSP SY P+
Sbjct: 1605 PTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1664
Query: 288 T 286
+
Sbjct: 1665 S 1665
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 313
P P P P+ S +S +PK+ P P S P PTS + T YS
Sbjct: 1701 PTYSPTSPTYSPTSPSYESGGG-YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYS 1759
Query: 312 P 310
P
Sbjct: 1760 P 1760
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -2
Query: 489 PKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSP 310
P+ P P P + S+ ++ +P+ PQ S P PTS ++ + YSP
Sbjct: 1749 PQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSP 1808
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 456 PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSP 310
P P S S+ +S +P + P PQ S P P+S + + Y+P
Sbjct: 1725 PSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNP 1774
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 486 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 376
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1548 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1583
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 486 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 376
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1570 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1605
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 486 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 376
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1361 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1396
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 486 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 376
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1668 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1703
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 486 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 376
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1548 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1583
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 486 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 376
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1570 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1605
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 486 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 376
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1361 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1396
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 486 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 376
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1668 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1703
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 486 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 376
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1379 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1414
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 486 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 376
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1339 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1374
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/70 (31%), Positives = 28/70 (40%)
Frame = -2
Query: 600 PAPGSVTP*AATNGSSISLPRYFFCCSLFPAIMMGVCPKDVPPIAVVMPVHPNASSSATM 421
P G P +GS +P + MGV P D+PP + MP P SSSA
Sbjct: 14 PPGGGAQPFPGASGSGGMMPNGAHPHMSLNSPSMGVPPADMPPF-MGMPPMPPTSSSAMP 72
Query: 420 HSSKTPKFPM 391
+ PM
Sbjct: 73 FGMSSDHQPM 82
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 474 PIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 376
P+ V P H N + + + +S + P+PP+ S
Sbjct: 736 PVQVSAPTHSNVAPTTSSQASADARNPLPPKTS 768
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 474 PIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 376
P+ V P H N + + + +S + P+PP+ S
Sbjct: 843 PVQVSAPTHSNVAPTTSSQASADARNPLPPKTS 875
>U23179-2|AAK68207.1| 345|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 5 protein.
Length = 345
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 424 DALFEDAKIP-YAPAMFWNVSVH*ANFPSLLYNGPRVLPRLIILTRHRN 281
D F+ + P Y A FW +SV PSLLY +L R+++L H N
Sbjct: 10 DLAFQISYHPIYRLAQFWTLSVSLLAVPSLLY---FLLKRVLLLPFHGN 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,106,982
Number of Sequences: 27780
Number of extensions: 298490
Number of successful extensions: 939
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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