Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11i02
(722 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr... 115 6e-27
SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|ch... 113 2e-26
SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|ch... 64 2e-11
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 33 0.055
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.13
SPAC26H5.09c |||GFO/IDH/MocA family oxidoreductase|Schizosacchar... 30 0.29
SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|c... 30 0.38
SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase Rdp1|Schizosa... 28 1.6
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 27 2.1
SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces... 26 6.3
SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr 1|||... 25 8.3
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 25 8.3
SPAC12B10.11 |exg2||glucan 1,3-beta-glucosidase Exg2|Schizosacch... 25 8.3
>SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 877
Score = 115 bits (277), Expect = 6e-27
Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Frame = +3
Query: 162 VKKRLPILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYGLYSSFIGTM 341
++ PI+ W P+Y+ V D PQ ++YA +A LP QYGLYSSF+G
Sbjct: 116 LRSLFPIMNWLPRYNWNWLVYDFIAGITVGCVVVPQGMSYAKVATLPAQYGLYSSFVGVA 175
Query: 342 LYVILGTVKEVSIGPTSLMALFTLQICREL--------PIEFVVLLTFLSGCIVFVMGLL 497
+Y I T K+VSIGP ++M+L T ++ + + L L+G I +GLL
Sbjct: 176 IYCIFATSKDVSIGPVAVMSLVTSKVIANVQAKDPNYDAAQIGTTLALLAGAITCGLGLL 235
Query: 498 RLGFLVDLISPSVTSGFTSATAIIIVAGQVKGLIGLSFVAESVADNVYFVVSKWRDI--R 671
RLGF+++ I +GFT+ +A+ I+AGQV L+G + A ++ +++
Sbjct: 236 RLGFIIEFIPVPAVAGFTTGSALNIMAGQVSSLMGYKSRVHTNAATYRVIIQTLQNLPHT 295
Query: 672 LADCALGAVCCTVLLLL 722
D A G V +L L+
Sbjct: 296 KVDAAFGLVSLFILYLV 312
>SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 840
Score = 113 bits (273), Expect = 2e-26
Identities = 64/193 (33%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Frame = +3
Query: 162 VKKRLPILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYGLYSSFIGTM 341
+K PI+EW P Y+ + D PQ ++YA +A LP +YGLYSSF+G
Sbjct: 103 LKSLFPIIEWLPNYNPYWLINDLIAGITVGCVVVPQGMSYAKVATLPSEYGLYSSFVGVA 162
Query: 342 LYVILGTVKEVSIGPTSLMALFTLQICRELPI--------EFVVLLTFLSGCIVFVMGLL 497
+Y T K+VSIGP ++M+L T ++ + + L L+G I +GLL
Sbjct: 163 IYCFFATSKDVSIGPVAVMSLITAKVIANVMAKDETYTAPQIATCLALLAGAITCGIGLL 222
Query: 498 RLGFLVDLISPSVTSGFTSATAIIIVAGQVKGLIGLSFVAESVADNVYFVVS-KWRDIRL 674
RLGF+++ I +GFT+ +A+ I++GQV L+G + A + + S K
Sbjct: 223 RLGFIIEFIPVPAVAGFTTGSALNILSGQVPALMGYKNKVTAKATYMVIIQSLKHLPDTT 282
Query: 675 ADCALGAVCCTVL 713
D A G V +L
Sbjct: 283 VDAAFGLVSLFIL 295
>SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 667
Score = 64.1 bits (149), Expect = 2e-11
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 16/205 (7%)
Frame = +3
Query: 156 RLVKKRLPILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYA-SLANLPVQYGLYSSFI 332
R + +P+L W P Y + D P ++++A + +P Y L + I
Sbjct: 57 RRINYYIPVLHWLPNYSLRNIIWDVLAGCSTACLSVPIALSFAQTFLGVPPIYILTGTAI 116
Query: 333 GTMLYVILGTVKEVSIGPTSLMALFTLQICRE-------LPIEFVVLLT----FLSGCIV 479
G +LY + +SIGP + M L + + +P E +L+T F++G I
Sbjct: 117 GPILYCLFTACPLISIGPEAGMCLLIAENIHQRVLSKADVPQETAILVTGLIAFIAGIIN 176
Query: 480 FVMGLLRLGFLVDLISPSVTSGFTSATAIIIVAGQVKGLIGLSFV----AESVADNVYFV 647
GL RLGFL L+SP + G + ++II+ Q G S V ++ D + F+
Sbjct: 177 LAAGLFRLGFLDALVSPVLLRGCILSISMIIMINQGSVFFGFSGVKYKGSDFPIDKLMFL 236
Query: 648 VSKWRDIRLADCALGAVCCTVLLLL 722
+ + L C T+ LL+
Sbjct: 237 IRNMSKANIYTTILS--CITISLLI 259
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 32.7 bits (71), Expect = 0.055
Identities = 25/90 (27%), Positives = 38/90 (42%)
Frame = -2
Query: 631 SATDSATKLSPISPFTCPATMMIAVADVKPLVTEGDIKSTRKPNLKSPITKTIHPERNVS 452
+ T ++T S SPF+ +T A KPL G + ST N +K +
Sbjct: 74 ATTGNSTNASTSSPFSFGSTNTNNTAGAKPLF--GGLGSTGSANSTGDKSKNTASSATGA 131
Query: 451 STTNSMGSSRQI*RVNSAIKLVGPIDTSLT 362
+TTN GS+ N++ P T+ T
Sbjct: 132 ATTNPSGSTFNFGSSNNSFNFGKPASTTNT 161
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.5 bits (68), Expect = 0.13
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = -2
Query: 697 TAPSAQSASLMSLHLLTTKYTLSATDSATKLSPISPFTCPATMMIAVADVKPLVTEG--- 527
TA ++ SA+ S T+ S+T S+T LS + T + + V T
Sbjct: 262 TAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASS 321
Query: 526 -DIKSTRKPNLKSPITKTIHPERNVSSTTNSMGSSRQI*RVNS 401
+ S N + + + P +V+STT + SS + VNS
Sbjct: 322 TPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNS 364
>SPAC26H5.09c |||GFO/IDH/MocA family
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 369
Score = 30.3 bits (65), Expect = 0.29
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -1
Query: 263 HQGKAQRDPGHQVRHGRQAVVLWSPLQDRQSLLH--KPTPSAVLFIARRQRESVVHIHHS 90
++G + DPG+ V LW+ L + H KPT S ++ IA R + +H +
Sbjct: 272 NEGMSPMDPGYGVDSSHHYATLWT-LPPDIDVRHPPKPTKSTLMTIAGDYRRFYLEVHEA 330
Query: 89 VLVRS 75
++ ++
Sbjct: 331 LVTKT 335
>SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 958
Score = 29.9 bits (64), Expect = 0.38
Identities = 23/88 (26%), Positives = 39/88 (44%)
Frame = +3
Query: 327 FIGTMLYVILGTVKEVSIGPTSLMALFTLQICRELPIEFVVLLTFLSGCIVFVMGLLRLG 506
F + + IL V E + P S++A L C L + L+G + F++G+LRLG
Sbjct: 233 FFHQIAFTILNRVGEDN--PKSVIATTILAYC---------LSSILTGLVFFILGILRLG 281
Query: 507 FLVDLISPSVTSGFTSATAIIIVAGQVK 590
L++ + G +V V+
Sbjct: 282 RLIEFFPRHILLGCIGGVGSFLVLTAVE 309
>SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase
Rdp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1215
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -2
Query: 376 DTSLTVPRMTYSIVPIKEEYNPY*TGKLARDAYAMLCGTRVRPSVTPA-TKSATAVR 209
D L+VP + I + Y TGKL LC PS+ P + AVR
Sbjct: 814 DAVLSVPEIFIQITDTSTSFGSYSTGKLKTRVIVGLCIVARNPSLHPGDVRVCKAVR 870
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 505 PNLKSPITKTIHPERNVS--STTNSMGSSRQI*RVNSAIKLVGPIDTS 368
PN KS TKT HPE + S S SM + + ++ I G +D S
Sbjct: 79 PNFKSVCTKTNHPESSSSRHSKKKSMENRKSSLYGSNGINSCGCVDIS 126
>SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 662
Score = 25.8 bits (54), Expect = 6.3
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 435 IEFVVLLTFLSGCIVFVMGL-LRLGFLVDLISPSVTSGFTSATAIIIVAGQVKGLIGLSF 611
I + LL +S C + + + +G V + P + + AI+ + G + +I F
Sbjct: 118 ITYRELLASVSQCAGALQSMGVGMGDRVAIYMPMIPETIIAMLAIVRL-GAIHSVIFAGF 176
Query: 612 VAESVADNV 638
AESVAD V
Sbjct: 177 SAESVADRV 185
>SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 221 HGRQAVVL-WSPLQDRQSLLHK 159
HG++ + W P ++RQSL+HK
Sbjct: 20 HGQRLELSGWDPKEERQSLVHK 41
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = -1
Query: 374 HLFDCTQDDVQHCTDKRRIQSILNR*VSEGCVCNALRHQGK 252
+LF +D + T K I +N + C+ +R +GK
Sbjct: 836 YLFRIDEDVIVDATKKGNIARFINHSCAPNCIARIIRVEGK 876
>SPAC12B10.11 |exg2||glucan 1,3-beta-glucosidase
Exg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 405 FTLQICRELP---IEFVVLLTFLSGCIVFVMGLLRLGFLV 515
FT + CRE+ + +LLTF VF+ +L L FLV
Sbjct: 21 FTSKRCREIDKKALLITILLTFFVSLCVFLSIILPLIFLV 60
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,608,321
Number of Sequences: 5004
Number of extensions: 49745
Number of successful extensions: 194
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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