Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt11i02
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0013 - 4921925-4922077,4922176-4922252,4922360-4922445,492... 106 2e-23
10_08_0031 + 14281681-14282023,14282105-14282484,14282581-142826... 104 6e-23
03_02_0012 - 4914223-4914468,4914511-4914587,4914671-4914732,491... 103 1e-22
09_02_0018 + 3016137-3016186,3016529-3016776,3018717-3018811,302... 101 8e-22
03_01_0424 - 3253179-3253367,3253480-3253556,3253654-3253739,325... 97 9e-21
01_05_0557 + 23243507-23243855,23243952-23244331,23244866-232449... 94 9e-20
03_02_0015 + 4965894-4966214,4966339-4966387,4966504-4966890,496... 94 1e-19
01_06_0517 + 29981537-29981927,29982024-29982231,29982373-299825... 93 2e-19
08_02_0622 + 19422001-19422330,19422411-19422459,19422552-194227... 91 8e-19
04_04_1399 - 33249210-33249359,33249521-33249597,33249735-332498... 89 4e-18
06_01_0319 - 2292071-2292208,2292342-2292418,2292758-2293321,229... 88 6e-18
03_02_0014 + 4955759-4956106,4956229-4956277,4956372-4956579,495... 88 6e-18
07_01_0785 + 6095041-6095135,6095455-6095760,6098458-6098554,609... 31 0.70
04_03_0857 + 20352331-20352582,20352740-20352951,20353047-203533... 29 2.8
01_01_0012 + 71903-72935,73468-73981,74619-76008 29 2.8
01_01_0933 - 7368672-7368785,7368860-7368895,7369581-7369715,736... 29 3.7
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 29 4.9
04_03_0858 + 20357519-20357573,20358072-20358119,20360675-203609... 29 4.9
12_02_1169 - 26655170-26655332,26655429-26655504,26655603-266557... 28 8.6
12_01_0656 - 5554906-5555194,5555640-5556178 28 8.6
>03_02_0013 -
4921925-4922077,4922176-4922252,4922360-4922445,
4922527-4922720,4922829-4923115,4923219-4923345,
4923586-4923816,4923982-4924047,4925300-4925474,
4925563-4925770,4925886-4925934,4926249-4926578
Length = 660
Score = 106 bits (254), Expect = 2e-23
Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Frame = +3
Query: 177 PILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYGLYSSFIGTMLYVIL 356
P+L+W Y+ +D PQSI YA+LA L QYGLY+S + ++Y ++
Sbjct: 80 PVLQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVM 139
Query: 357 GTVKEVSIGPTSLMALFTLQICREL------PIEF---VVLLTFLSGCIVFVMGLLRLGF 509
GT +E++IGP ++++L + ++ P+ + V +TFL+G GL RLGF
Sbjct: 140 GTSREIAIGPVAVVSLLLSSMVSKIVDPAVDPVTYRALVFTVTFLAGVFQVSFGLFRLGF 199
Query: 510 LVDLISPSVTSGFTSATAIIIVAGQVKGLIGLSFVAES--VADNVYFVVSKWRD 665
LVD +S + GF + AI+I Q+KGL+GLS S V + V S RD
Sbjct: 200 LVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGLSHFTNSTDVVSVIKAVCSALRD 253
>10_08_0031 +
14281681-14282023,14282105-14282484,14282581-14282646,
14284078-14284191,14284302-14284418,14284526-14284652,
14284779-14285065,14285200-14285390,14285504-14285589,
14285718-14285794,14285902-14286090
Length = 658
Score = 104 bits (250), Expect = 6e-23
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Frame = +3
Query: 105 DDGLPLTTSDKQNRTWRRLVKKRLPILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYA 284
DD + R ++ P LEW P Y +D PQ I+YA
Sbjct: 44 DDPFRAVARESGGRRALAALRYVFPFLEWLPSYSLAALWSDVVAGVTIASLAVPQGISYA 103
Query: 285 SLANLPVQYGLYSSFIGTMLYVILGTVKEVSIGPTSLMA-LFTLQICRELP--------I 437
L +LP GLYSSF+ ++Y ++G+ +E+++G T++ + LF + +E P
Sbjct: 104 KLGDLPPIMGLYSSFVPPLVYAVMGSSRELAVGTTAVASLLFAATLGKEAPPGEKPELYA 163
Query: 438 EFVVLLTFLSGCIVFVMGLLRLGFLVDLISPSVTSGFTSATAIIIVAGQVKGLIGLSFVA 617
TF +G + +G+LRLGFLVDL+S + GF + A I+ Q+KG++GL+
Sbjct: 164 ALAFTATFFAGVLQAGLGVLRLGFLVDLLSHAAIVGFMAGAATIVCLQQLKGMLGLAHFT 223
Query: 618 ES--VADNVYFVVSKWRDIRLADCALGAVCCTVLLLL 722
S V V VV++ R +G CC ++ LL
Sbjct: 224 TSTDVVAVVRSVVTQSHQWRWQSIVVG--CCFLIFLL 258
>03_02_0012 -
4914223-4914468,4914511-4914587,4914671-4914732,
4914825-4915018,4915153-4915439,4915520-4915646,
4916216-4916446,4917210-4917384,4917461-4917668,
4917745-4917793,4918016-4918300
Length = 646
Score = 103 bits (247), Expect = 1e-22
Identities = 57/153 (37%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Frame = +3
Query: 177 PILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYGLYSSFIGTMLYVIL 356
PIL+W Y+ +D PQSI YA+LA L QYGLY+S + ++Y +
Sbjct: 65 PILDWWKTYNLKFFRSDLMAGLTLASLSIPQSIGYATLAKLDPQYGLYTSVVPPLVYAVT 124
Query: 357 GTVKEVSIGPTSLMALFTLQICREL------PI---EFVVLLTFLSGCIVFVMGLLRLGF 509
G+ +E++IGP ++++L + +++ P + V +TFL+G F GL RLGF
Sbjct: 125 GSSREIAIGPVAIVSLLLSSMIQKIVDPSVDPAFYRKMVFTVTFLTGVFQFAFGLFRLGF 184
Query: 510 LVDLISPSVTSGFTSATAIIIVAGQVKGLIGLS 608
LVD +S + GF AI+I Q+KGL+GLS
Sbjct: 185 LVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGLS 217
>09_02_0018 +
3016137-3016186,3016529-3016776,3018717-3018811,
3020025-3020330,3021288-3021336,3021436-3021637,
3023364-3023532,3023605-3023634,3023742-3023807,
3025313-3025378,3029404-3029464,3029592-3029719,
3030716-3030757,3031074-3031190,3031280-3031339
Length = 562
Score = 101 bits (241), Expect = 8e-22
Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Frame = +3
Query: 174 LPILEWAPQYD-RLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYGLYSSFIGTMLYV 350
LP L W Y + AD PQ+++YA LA L YGLY+ F+ +Y
Sbjct: 201 LPCLSWMRTYRLKEDLQADLAAGITVGVMLVPQAMSYAKLAGLHPIYGLYTGFVPLFVYA 260
Query: 351 ILGTVKEVSIGPTSLMALFTLQIC-------RELPIEFVVLLTFLSGCIVFVMGLLRLGF 509
I G+ +++++GP +L++L + EL E +LL F+ G + +MGLLRLG+
Sbjct: 261 IFGSSRQLAVGPVALVSLLVSNVLGGIVDSSSELYTELAILLAFMVGVLECLMGLLRLGW 320
Query: 510 LVDLISPSVTSGFTSATAIIIVAGQVKGLIGLSFVAES 623
L+ IS SV SGFT+A+AI+I Q+K +G S S
Sbjct: 321 LIRFISHSVISGFTTASAIVIGLSQIKYFLGYSVTRSS 358
>03_01_0424 -
3253179-3253367,3253480-3253556,3253654-3253739,
3253844-3254321,3254393-3254519,3254624-3254740,
3254853-3254966,3256650-3256715,3257738-3258117,
3258217-3258496
Length = 637
Score = 97.5 bits (232), Expect = 9e-21
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 14/176 (7%)
Frame = +3
Query: 177 PILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYGLYSSFIGTMLYVIL 356
P +EWAP Y T +D PQ I+YA LANLP GLYSSF+ ++Y ++
Sbjct: 47 PFMEWAPSYTLGTLKSDLIAGITIASLAIPQGISYAKLANLPPVLGLYSSFVPPLVYAMM 106
Query: 357 GTVKEVSIGPTSLMALFTLQICRE---------LPIEFVVLLTFLSGCIVFVMGLLRLGF 509
G+ +++++G ++ +L + E L + + TF +G ++G+LRLGF
Sbjct: 107 GSSRDLAVGTVAVASLLIGSMLSEEVSAAEDPALYLHVALTATFFAGVFQALLGVLRLGF 166
Query: 510 LVDLISPSVTSGFTSATAIIIVAGQVKGLIGLSFVAE-----SVADNVYFVVSKWR 662
+VD +S + GF A ++ Q+KG+ GL SV +V+ WR
Sbjct: 167 IVDFLSHATIVGFMGGAATVVCLQQLKGMFGLDHFTTATDLVSVMSSVFSQTHLWR 222
>01_05_0557 +
23243507-23243855,23243952-23244331,23244866-23244931,
23245023-23245136,23245226-23245342,23245444-23245570,
23245660-23246486
Length = 659
Score = 94.3 bits (224), Expect = 9e-20
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Frame = +3
Query: 144 RTWRRLVKKRLPILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYGLYS 323
R WR + + +P L+W Y + D PQ I+YA+LA +P GLYS
Sbjct: 60 RAWR-VARYFVPALDWGAGYSAASFWYDLLAGVTIASLSIPQGISYATLAGIPPVIGLYS 118
Query: 324 SFIGTMLYVILGTVKEVSIGPTSLMALFTLQIC---------RELPIEFVVLLTFLSGCI 476
F+ ++Y ++G+ + + +GP + +L I + L + V F +G +
Sbjct: 119 CFVPPLVYAVMGSSRNLGVGPVATSSLLVASIVGGKVRASDDQRLYTQLVFTSAFFTGVL 178
Query: 477 VFVMGLLRLGFLVDLISPSVTSGFTSATAIIIVAGQVKGLIGLS 608
+GLLRLG LVD +S +GF TAI+I+ Q+KG +G++
Sbjct: 179 QAALGLLRLGILVDFMSRPAITGFMGGTAIVIMLQQLKGFLGMT 222
>03_02_0015 +
4965894-4966214,4966339-4966387,4966504-4966890,
4966976-4967034,4967128-4967241,4967344-4967460,
4967558-4967684,4967764-4968050,4968148-4968338,
4968801-4968886,4968975-4969051,4969161-4969304
Length = 652
Score = 93.9 bits (223), Expect = 1e-19
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Frame = +3
Query: 135 KQNRTWRRLVKKRLPILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYG 314
+ + W L + P+ EW QY D PQ I YA LANLP + G
Sbjct: 64 RSRKLWLAL-QHVFPVFEWGRQYTLAKFKGDLIAGLTLASLVIPQDIGYAKLANLPPEIG 122
Query: 315 LYSSFIGTMLYVILGTVKEVSIGPTSLMALFTLQICRE------LPIEF---VVLLTFLS 467
L+SSF+ ++Y ++GT +E+++GP ++++L + +E P+++ TF +
Sbjct: 123 LHSSFVPPLIYALMGTSRELAMGPVAVISLLLGTLLQEEIDSKKNPLDYRRLAFTATFFA 182
Query: 468 GCIVFVMGLLRLGFLVDLISPSVTSGFTSATAIIIVAGQVKGLIGLSFVAESVADNVYFV 647
G +G RLGF++ +S + GF + AI I Q+KG +G++ + D + +
Sbjct: 183 GVTQAALGFCRLGFIIAFLSHAAIIGFMAGAAITIALQQLKGFLGIANFTKK-TDIISVM 241
Query: 648 VSKWRDI 668
S W ++
Sbjct: 242 KSVWGNV 248
>01_06_0517 +
29981537-29981927,29982024-29982231,29982373-29982544,
29984468-29984533,29984658-29984771,29984880-29984996,
29985097-29985223,29985317-29985603,29985701-29985891,
29985981-29986063,29986175-29986251,29986729-29986896
Length = 666
Score = 93.5 bits (222), Expect = 2e-19
Identities = 58/187 (31%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Frame = +3
Query: 144 RTWRRLVKKRLPILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYGLYS 323
R W VK +P L+W P+Y D PQ I+YA LANLP GLYS
Sbjct: 74 RAWCA-VKYFVPALDWVPRYGLDKFKFDLLAGITIASLAIPQGISYARLANLPPIIGLYS 132
Query: 324 SFIGTMLYVILGTVKEVSIGPTSLMALFTLQICR---------ELPIEFVVLLTFLSGCI 476
SF+ ++Y + G+ +++G + +L I +L ++ F +G
Sbjct: 133 SFVPPLMYAVFGSSNNLAVGTVAAASLLLASIIETEVAADENPQLYLQLFYTAAFFTGLF 192
Query: 477 VFVMGLLRLGFLVDLISPSVTSGFTSATAIIIVAGQVKGLIGLS-FVAE----SVADNVY 641
+G+ RLG +VD +S S +GF TA+II+ Q KGL+G+ F + SV + Y
Sbjct: 193 QTALGVFRLGLIVDFLSRSTITGFMGGTAMIIILQQFKGLLGMKHFTTKTDIISVLHSTY 252
Query: 642 FVVSKWR 662
+W+
Sbjct: 253 HYRHEWK 259
>08_02_0622 +
19422001-19422330,19422411-19422459,19422552-19422759,
19422832-19423006,19423101-19423166,19423264-19423377,
19423473-19423589,19423677-19423803,19423893-19424179,
19424279-19424469,19424571-19424656,19424749-19424825,
19425057-19425200
Length = 656
Score = 91.1 bits (216), Expect = 8e-19
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Frame = +3
Query: 177 PILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYGLYSSFIGTMLYVIL 356
PI EW Y+ D PQ I Y+ LANL QYGLYSSF+ ++Y +
Sbjct: 80 PIFEWGRCYNLRKFKGDLIAGLTIASLCIPQDIGYSKLANLDAQYGLYSSFVPPLIYAAM 139
Query: 357 GTVKEVSIGPTSLMALFTLQIC---------RELPIEFVVLLTFLSGCIVFVMGLLRLGF 509
G+ K+++IGP ++++L + +E + TF +G +G LRLGF
Sbjct: 140 GSSKDIAIGPVAVVSLLIGSLLQNEVDPVKNKEEYLRLAFTATFFAGITQAALGFLRLGF 199
Query: 510 LVDLISPSVTSGFTSATAIIIVAGQVKGLIGLSFVAESVADNVYFVVSKW 659
L++ +S + GF AI I Q+K ++G+ + D + + S W
Sbjct: 200 LIEFLSHAAIVGFMGGAAITIALQQLKYVLGIKSFTKK-TDIISVMRSVW 248
>04_04_1399 -
33249210-33249359,33249521-33249597,33249735-33249814,
33249904-33250094,33250183-33250469,33250595-33250721,
33250878-33250994,33251085-33251198,33251510-33251671,
33252909-33252974,33253098-33253269,33253377-33253584,
33253728-33253776,33254132-33254305
Length = 657
Score = 88.6 bits (210), Expect = 4e-18
Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 10/159 (6%)
Frame = +3
Query: 273 IAYASLANLPVQYGLYSSFIGTMLYVILGTVKEVSIGPTSLMALFTLQICREL------P 434
I+YA LA+LP GLYSSF+ M+Y +LG+ +++++GP S+ +L + R+ P
Sbjct: 60 ISYAKLASLPPIIGLYSSFVPPMVYAVLGSSRDLAVGPVSIASLIMGSMLRQAVSPAAEP 119
Query: 435 IEFVVLL---TFLSGCIVFVMGLLRLGFLVDLISPSVTSGFTSATAIIIVAGQVKGLIGL 605
+ F+ L TF +G + +G+LRLGF++D +S + GF + AII+ Q+K L+G+
Sbjct: 120 LLFLQLAFTSTFFAGLVQASLGILRLGFIIDFLSKATLVGFMAGAAIIVSLQQLKALLGI 179
Query: 606 -SFVAESVADNVYFVVSKWRDIRLADCALGAVCCTVLLL 719
F E V V L AVC VLLL
Sbjct: 180 VHFTTEMGLVPVMASVIHHTKEWSWQTILMAVCFLVLLL 218
>06_01_0319 -
2292071-2292208,2292342-2292418,2292758-2293321,
2293978-2294104,2294207-2294323,2294440-2294547,
2296567-2296804,2296915-2297122,2297199-2297247,
2297384-2297728
Length = 656
Score = 88.2 bits (209), Expect = 6e-18
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 9/120 (7%)
Frame = +3
Query: 273 IAYASLANLPVQYGLYSSFIGTMLYVILGTVKEVSIGPTSLMALFTLQICREL------P 434
I+YA LANLP GLYSSF+ ++Y +LG+ +++++GP S+ +L + R+ P
Sbjct: 117 ISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRDLAVGPVSIASLVMGSMLRQAVSPDQEP 176
Query: 435 IEFVVLL---TFLSGCIVFVMGLLRLGFLVDLISPSVTSGFTSATAIIIVAGQVKGLIGL 605
I ++ L TF +G +G LRLGF+VD +S + +GF AII+ Q+KGL+G+
Sbjct: 177 ILYLQLAFTSTFFAGVFQASLGFLRLGFIVDFLSKATLTGFMGGAAIIVSLQQLKGLLGI 236
>03_02_0014 +
4955759-4956106,4956229-4956277,4956372-4956579,
4956700-4956874,4956981-4957046,4957150-4957263,
4957366-4957482,4957589-4957715,4957826-4958112,
4958209-4958399,4958937-4959022,4959117-4959193,
4959330-4959473
Length = 662
Score = 88.2 bits (209), Expect = 6e-18
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Frame = +3
Query: 177 PILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYGLYSSFIGTMLYVIL 356
P+L+W Y D PQ I YA LA L YGLYSSF+ ++Y ++
Sbjct: 86 PVLDWGRHYTFRKFRGDLVSGLTIASLCIPQDIGYAKLAGLLPNYGLYSSFVPPLIYAMM 145
Query: 357 GTVKEVSIGPTSLMAL---------FTLQICRELPIEFVVLLTFLSGCIVFVMGLLRLGF 509
G+ ++++IGP ++++L F + +E TF +G +G LRLGF
Sbjct: 146 GSSRDIAIGPVAVVSLLLGTLLQNEFDPKKNQEEYTRLAFTATFFAGVTQAALGFLRLGF 205
Query: 510 LVDLISPSVTSGFTSATAIIIVAGQVKGLIGLSFVAESVADNVYFVVSKWRDI 668
+++ +S + GF + AI I Q+KG +G++ + D + + S W ++
Sbjct: 206 IIEFLSHAAIVGFMAGAAITIALQQLKGFLGIANFTKK-TDIISVMKSVWGNV 257
>07_01_0785 +
6095041-6095135,6095455-6095760,6098458-6098554,
6098943-6098999,6099202-6099751,6099922-6100234,
6100245-6100335,6101002-6101469
Length = 658
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = -1
Query: 710 NGAADGPKCTVSQPYVPPLADHEVHVVRHRLRDEAQSYQPLHLSGDDDDCG 558
NGA K TV QP D H RHR R + Y L +G++ G
Sbjct: 43 NGAVKTRKSTVMQPPPAEEEDDADHAARHRSRQLRELYDWLQQAGENSSGG 93
>04_03_0857 +
20352331-20352582,20352740-20352951,20353047-20353308,
20353418-20353726
Length = 344
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 184 WSGLHSTTA*RPWRTWWPGSRWALPWCRRALHTHPSLTYLFN 309
WSGL S + W P +WA+ W H P LTY +N
Sbjct: 170 WSGLPSNVSWHAWNQQLPQDKWAV-W---VSHHLPWLTYWWN 207
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -1
Query: 503 QSQKSHNKDDTSGKERQ*YHEFNGQLSADLKGEQRHQARRTYR 375
++ KSH++DD+S K+R+ Y E + S D RH + R++R
Sbjct: 796 KTDKSHDRDDSSRKDRK-YREDESRHSRDRC--SRHSSSRSHR 835
>01_01_0933 -
7368672-7368785,7368860-7368895,7369581-7369715,
7369825-7369989,7370060-7370140,7370316-7370391,
7370479-7370612,7370706-7370798,7371860-7372188,
7372290-7372350,7372407-7372778
Length = 531
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 193 LHSTTA*RPWRTWWPG--SRWA 252
L +TT RPWRT W G RWA
Sbjct: 37 LSATTTRRPWRTGWRGRPMRWA 58
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 28.7 bits (61), Expect = 4.9
Identities = 30/126 (23%), Positives = 55/126 (43%)
Frame = -2
Query: 718 RSRTVQQTAPSAQSASLMSLHLLTTKYTLSATDSATKLSPISPFTCPATMMIAVADVKPL 539
RS T +T PS + + S + T + S +DSA + + + P+T + + P
Sbjct: 136 RSSTPVKTRPSTPTKTRPSTPVRTRQTANSTSDSAAARTTSAQNSRPST-PTSRSRAMPN 194
Query: 538 VTEGDIKSTRKPNLKSPITKTIHPERNVSSTTNSMGSSRQI*RVNSAIKLVGPIDTSLTV 359
+ G I + +P + + +S+T+ SS + ++ A L +S TV
Sbjct: 195 SSSGAIPAMSRPGASTISATSRSNASTISATSRPGSSSSNVPGISRATSL-----SSSTV 249
Query: 358 PRMTYS 341
P M+ S
Sbjct: 250 PSMSRS 255
>04_03_0858 +
20357519-20357573,20358072-20358119,20360675-20360922,
20361152-20361363,20361480-20361741,20361832-20362143
Length = 378
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 184 WSGLHSTTA*RPWRTWWPGSRWALPWCRRALHTHPSLTYLFN 309
WSGL S + W P +WA+ W H P LTY +N
Sbjct: 203 WSGLPSNMSWHVWNQQLPQDKWAV-W---VSHHLPWLTYWWN 240
>12_02_1169 -
26655170-26655332,26655429-26655504,26655603-26655715,
26655808-26655913,26656001-26656235,26656415-26656573,
26657279-26657377,26657472-26657568,26657650-26657768,
26657860-26658000,26658100-26658184,26658287-26658488,
26659274-26659379
Length = 566
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Frame = +3
Query: 393 LMALFTLQICRELP-IEFVVLLTFLSGCIVFVMGLLR---LGFLVDLISPSVTSGFTSAT 560
L+ + T +C+ + FV + + C V + ++ +GF + V GF
Sbjct: 164 LVLVVTALLCKGIKESSFVQGVVTVLNCFVMLFVIIAGSYIGFQTGWVGYKVAGGFFPYG 223
Query: 561 AIIIVAGQVKGLIGLSFVA-ESVADNVYFVVSKWRDIRLADCALGAVCCTVLLLL 722
A ++AG + +++ +SVA V + RD+ L +VCC++ +L+
Sbjct: 224 ANGMLAGSAT--VFFAYIGFDSVASTAEEVKNPQRDLPLGIGTALSVCCSLYMLV 276
>12_01_0656 - 5554906-5555194,5555640-5556178
Length = 275
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 501 LGFLVDLISPSVTSGFTSATAIIIVAGQVKGLI-GLSFVAESVADNVYFVVSKWRDIRLA 677
L FL++LI+ + G I +AG+ + L+ GLSFV DN Y WR + LA
Sbjct: 198 LSFLINLIAATSKEG-------IYIAGEPEYLLLGLSFVEMERKDNCYL---SWRHLLLA 247
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,816,226
Number of Sequences: 37544
Number of extensions: 358929
Number of successful extensions: 1273
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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