Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt11h23
         (585 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   2.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   3.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   6.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.9  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 192 YGEQTGLII*KRRDHAWAVGPART*TGRIRGLE 94
           YG+  G II    +  W+VG   + +G I   E
Sbjct: 27  YGKGRGFIIQNNNNDDWSVGKKNSNSGTINESE 59


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -3

Query: 316 NSFSN*HQRDGM*AVTVAY*SLEXXXXIRE*MRTTEFNIKLLW*AN 179
           ++++  ++RD +  +T AY SLE      E      FN K +  AN
Sbjct: 283 DNYAEENKRDEIVLLTEAYSSLENTLKYYEVGSNVPFNFKFITDAN 328


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 272 YRCLLIFRNYNLDTRVNAHYR 210
           YRC +  + + +  R+  HYR
Sbjct: 92  YRCNICGKTFAVPARLTRHYR 112


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 20/63 (31%), Positives = 28/63 (44%)
 Frame = +1

Query: 247 FLKINKQR*PLTSHLSGANY*NYWSIFTPTDCLKGSTIHNMVSNHNGERRPVAAACCPEC 426
           +LK  +   PL  +L+ AN     S   P   L   T  N+ + H+G+   VAA    E 
Sbjct: 645 WLKDGQSPFPLPPNLASANI----SQLDPYSSLLSIT--NLAAEHSGDYTCVAANPAAEV 698

Query: 427 RET 435
           R T
Sbjct: 699 RYT 701


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 343 LKGSTIHNMVSNHNGERR 396
           L G+T+H+ ++ H G R+
Sbjct: 150 LGGTTLHHGMAYHRGHRK 167


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -1

Query: 375 TNHIVDGASLQTISWSKYRPIVLVISTREMG 283
           T++ +   +  T  W +Y P+V   +   MG
Sbjct: 489 TDYAIQVRAKTTRGWGEYTPVVYKKTPHAMG 519


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = -2

Query: 281 VSGYRCLLIFRNYNLDTRVNAHYRI 207
           V GY+C+++      D +++  Y +
Sbjct: 119 VRGYKCIIVMPEKMSDEKISTLYAL 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,323
Number of Sequences: 438
Number of extensions: 3163
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)